Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0392.Seq
(406 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23116| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017
SB_26345| Best HMM Match : DUF1531 (HMM E-Value=2.4) 34 0.038
SB_15757| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.15
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 32 0.20
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_14361| Best HMM Match : Dynactin_p62 (HMM E-Value=0.00091) 30 0.62
SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_13998| Best HMM Match : Kringle (HMM E-Value=0.0016) 30 0.82
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08) 30 0.82
SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0) 30 0.82
SB_2494| Best HMM Match : M (HMM E-Value=0.0056) 30 0.82
SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 29 1.1
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 29 1.1
SB_5808| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_41824| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_37659| Best HMM Match : Motilin_ghrelin (HMM E-Value=3.2) 29 1.9
SB_25394| Best HMM Match : CBFD_NFYB_HMF (HMM E-Value=1.7e-11) 29 1.9
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33) 29 1.9
SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_39358| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 29 1.9
SB_22727| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_19564| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_11458| Best HMM Match : GTP_CDC (HMM E-Value=2.6e-09) 29 1.9
SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07) 29 1.9
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 28 2.5
SB_57816| Best HMM Match : Bombesin (HMM E-Value=7.7e-05) 28 2.5
SB_20162| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_36968| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4) 28 3.3
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_7485| Best HMM Match : DUF1582 (HMM E-Value=2.7) 28 3.3
SB_1148| Best HMM Match : TPR_1 (HMM E-Value=0) 28 3.3
SB_55817| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.4
SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6) 27 4.4
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 27 4.4
SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.4
SB_50361| Best HMM Match : RNA_pol_delta (HMM E-Value=2.2) 27 4.4
SB_40264| Best HMM Match : DUF667 (HMM E-Value=0) 27 4.4
SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2) 27 4.4
SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022) 27 5.8
SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14) 27 5.8
SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064) 27 5.8
SB_25324| Best HMM Match : FtsH_ext (HMM E-Value=5.9) 27 5.8
SB_16403| Best HMM Match : Candida_ALS (HMM E-Value=1.7) 27 5.8
SB_11387| Best HMM Match : MFS_1 (HMM E-Value=4.4e-06) 27 5.8
SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09) 27 5.8
SB_3052| Best HMM Match : Peptidase_S8 (HMM E-Value=0) 27 5.8
SB_646| Best HMM Match : MGAT2 (HMM E-Value=2.1) 27 5.8
SB_41459| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_37148| Best HMM Match : TPR_1 (HMM E-Value=0) 27 5.8
SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_25854| Best HMM Match : Vicilin_N (HMM E-Value=5.5) 27 5.8
SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061) 27 5.8
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 27 5.8
SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 27 7.7
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 27 7.7
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 27 7.7
SB_14297| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 27 7.7
SB_32504| Best HMM Match : TolA (HMM E-Value=0.52) 27 7.7
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24) 27 7.7
SB_3124| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_842| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
>SB_23116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 35.5 bits (78), Expect = 0.017
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = -1
Query: 385 DKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSR---RLKRILPEIKRK 215
+ N + + ++ D+E + N++N ++D + + + R R+L E +R
Sbjct: 150 NNNDDYDDDNNNNNNDDDDEDDDSNNNNNDYDDNKCNREERNNEEERSRRPRVLTEEQRA 209
Query: 214 RKKLTQEILTERTKLLSAKKNNLLE 140
RK+ +LTE ++ +K++ E
Sbjct: 210 RKRARDLVLTEEQRVWKGQKDSEYE 234
>SB_26345| Best HMM Match : DUF1531 (HMM E-Value=2.4)
Length = 169
Score = 34.3 bits (75), Expect = 0.038
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = -3
Query: 251 KVEKNSARDK--KEKEKTDTRNSDGTYKTSEREKEQSSRVNQXXXXXXXXXXXXXXXXRK 78
+ E SAR K KEKE+ +T T TS +K++ +V +K
Sbjct: 79 QTETPSARKKKKKEKEQEETMEEQQTEATSSAKKKKKRKVEDVEDVEEKVEAETPKKKKK 138
Query: 77 VNKETETYSDKDAQTSESERTQSKK 3
++ TE ++ TSE ++ + KK
Sbjct: 139 KSETTEDEIEESINTSEKKKKKKKK 163
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -3
Query: 254 KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 141
+KVE + + KK+K +T + + TSE++K++ +
Sbjct: 126 EKVEAETPKKKKKKSETTEDEIEESINTSEKKKKKKKK 163
>SB_15757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 32.3 bits (70), Expect = 0.15
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3
Query: 266 PNXIKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRV 138
P K+ EK +KKE++KTD G K E +KEQ ++
Sbjct: 41 PEENKEEEKKEESEKKEEDKTD-GGGGGEEKKDEEKKEQEKKI 82
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 31.9 bits (69), Expect = 0.20
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Frame = -1
Query: 385 DKNRSVNSGSERKSSGKDEEYSE-----QNSSNKSFNDGDASADYQTXSRRLKRILPEIK 221
D+ RS N+G E + S EE++E + + K + DY+ RL + +
Sbjct: 2031 DELRSQNTGLEAELSNIKEEFTENKTGVETTEKKVVSLESEIKDYKQSIYRLGTEVESLA 2090
Query: 220 RKRKKLTQEILTERTKLLSAKKNNL 146
R+R LT+EI ++ +L +K L
Sbjct: 2091 RERDSLTEEIKSKDLRLGDIEKKYL 2115
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 30.7 bits (66), Expect = 0.47
Identities = 16/84 (19%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = -3
Query: 254 KKVEKNSARDKKEKE-KTDTRNSDGTYKTSEREKEQSSRVNQXXXXXXXXXXXXXXXXRK 78
KK K ++DKK+K+ K + + +K + ++ + ++ +
Sbjct: 158 KKKHKKHSKDKKKKKHKKEKKREKDKHKHKQEKESSDDKPDELSTPKKISEKGSPKGDGR 217
Query: 77 VNKETETYSDKDAQTSESERTQSK 6
K++ S +D T +S+R++S+
Sbjct: 218 ERKQSHPLSSRDQTTRQSKRSRSR 241
>SB_14361| Best HMM Match : Dynactin_p62 (HMM E-Value=0.00091)
Length = 497
Score = 30.3 bits (65), Expect = 0.62
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -1
Query: 406 AESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASAD 269
+E + +DKN SV +G K KD+E + + N + D D
Sbjct: 296 SEEDSAKDKNDSVTNGDVNKEDDKDKENQDVSKENVNDKADDGKED 341
>SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 30.3 bits (65), Expect = 0.62
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -3
Query: 224 KKEKEKTDTRNSDGTYKTSEREKEQSSRVNQXXXXXXXXXXXXXXXXRKVNKE-TETYSD 48
K+EKEK D G R +++ VN R+ KE TE D
Sbjct: 323 KREKEKEDDNRRGG------RRRQEKEDVNHQFRNERNAREKRDSRDRRDRKERTEEEQD 376
Query: 47 KDAQTSESERTQSK 6
K+ +T ES TQSK
Sbjct: 377 KEVKTRESPATQSK 390
>SB_13998| Best HMM Match : Kringle (HMM E-Value=0.0016)
Length = 832
Score = 29.9 bits (64), Expect = 0.82
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -1
Query: 331 EEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKKLTQEILTERTKLLSAKK 155
E+ +Q +NK +N G++S++ T R K+ E KR R + E + R + K+
Sbjct: 758 EDDKKQTKNNKEWNSGESSSEEYTKKDRRKK--DESKRTRNYSSDEEFSARRQKWKGKR 814
>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
Length = 865
Score = 29.9 bits (64), Expect = 0.82
Identities = 10/38 (26%), Positives = 26/38 (68%)
Frame = -3
Query: 245 EKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 132
E++ ++D+++ + RNS +++S REK++ S +++
Sbjct: 259 ERSKSKDQEKSTPRERRNSSSHHRSSSREKDRKSSMDK 296
>SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0)
Length = 1035
Score = 29.9 bits (64), Expect = 0.82
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 254 KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 141
K+ EK R+K EKT S +K +E EK++ +
Sbjct: 890 KRKEKKRRREKDSSEKTRVSKSSKNFKAAESEKKKRKK 927
>SB_2494| Best HMM Match : M (HMM E-Value=0.0056)
Length = 737
Score = 29.9 bits (64), Expect = 0.82
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 268 YQTXSRRLKRILPEIKRKRKKLTQEILTERTKLLSAK 158
YQ R L++ + EI+ + L QE+ T+R +L S K
Sbjct: 665 YQDKIRALEKEVSEIREAKNSLDQEVNTQRFRLTSMK 701
>SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 599
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/56 (26%), Positives = 22/56 (39%)
Frame = -1
Query: 403 ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRI 236
E R K R ERK K+E E+ + K F D + S T + ++
Sbjct: 51 ERKKERKKERKKEKKKERKKERKEERKKERKKAEKKFTDSNESVLVWTEGLNVSKV 106
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -3
Query: 254 KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQ 150
K+ E+ R+KKE+ K + + + ER+KE+
Sbjct: 30 KRDEREQEREKKERRKKERKKERKKERKKERKKEK 64
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 29.5 bits (63), Expect = 1.1
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = -1
Query: 382 KNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA---SADYQTXSRRLKRILPEIKRKR 212
KN+ S +KS+ E + NDGDA S T +LK + E K K+
Sbjct: 481 KNKESKSTKRKKSATGGEGKEAPAKKKQKHNDGDAPKKSKKKLTHEEKLK-LAEEEKEKK 539
Query: 211 KKLTQEILTERTKLLSAKKNNLLE 140
K+ QE + K L +K+ +E
Sbjct: 540 KQQIQE--DKEKKKLQKEKDRAVE 561
>SB_5808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 254 KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQ 150
+K+EK S K +KEK + S + + E+EKE+
Sbjct: 271 EKIEKKSQEQKPKKEKIHEKESATSNEKKEQEKER 305
>SB_41824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 28.7 bits (61), Expect = 1.9
Identities = 8/34 (23%), Positives = 24/34 (70%)
Frame = -3
Query: 245 EKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSS 144
++ +R K K+K +++ D ++++++R KE+++
Sbjct: 337 QEGKSRSKSNKDKESSKDRDNSHRSTKRRKEENT 370
>SB_37659| Best HMM Match : Motilin_ghrelin (HMM E-Value=3.2)
Length = 468
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 370 VNSGSERKSSGKDEEYSEQNSSNKS 296
V SGSE +S + EEYSE+ S +S
Sbjct: 317 VISGSEEESEEESEEYSEEESEEES 341
>SB_25394| Best HMM Match : CBFD_NFYB_HMF (HMM E-Value=1.7e-11)
Length = 149
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -1
Query: 406 AESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQT 260
A + + R K VN+ E + K ++ ++NS+ K+ +DG D QT
Sbjct: 102 AAAESKRKKKEVVNN-EEAEPDAKKQKTDDENSNKKNDSDGSDKEDNQT 149
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 28.7 bits (61), Expect = 1.9
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = -3
Query: 227 DKKEKEKTDTRNSDGTYKTSEREK----EQSSRVNQXXXXXXXXXXXXXXXXRKVNKETE 60
++KE++K++T+N D + ER+K E+ R + RK +E E
Sbjct: 414 EEKERKKSETKNKDSEDEEKERKKREAEEEEERRREEEERREEEERKREEEERKQREEEE 473
Query: 59 TYSDKD--AQTSESERTQSKK 3
+++ Q E ER Q +K
Sbjct: 474 KKREEEERKQREEEERKQKEK 494
>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
Length = 693
Score = 28.7 bits (61), Expect = 1.9
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = -3
Query: 257 IKKVE-KNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQXXXXXXXXXXXXXXXXR 81
I+K E + R KKE+++ + + + T + REKE + +
Sbjct: 585 IEKAEAREKERQKKEEKEESSHSDEDTSRDRNREKENDREREKEREKEKEKEERDKEREK 644
Query: 80 KVNKETETYSDKDAQTSESERTQSK 6
+ KE E +K+ + E ER + K
Sbjct: 645 EKEKEKEREKEKERE-REKERDRDK 668
>SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 251 KVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 141
K +K + DK+E +K D N + K + +KE+ +
Sbjct: 3 KQDKENKEDKEEMDKQDKENKEDKEKMDKEDKEEMDK 39
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/77 (19%), Positives = 31/77 (40%)
Frame = -3
Query: 251 KVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQXXXXXXXXXXXXXXXXRKVN 72
K +K + DK++ +K D D K ++ +KE+ + ++ K +
Sbjct: 17 KQDKENKEDKEKMDKEDKEEMDKQDKENKEDKEEMDKEDKEEMDQEEMDKEDKEEMDKED 76
Query: 71 KETETYSDKDAQTSESE 21
KE + D + + E
Sbjct: 77 KEEMDQEEMDKEEMDQE 93
>SB_39358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = -1
Query: 355 ERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKKLTQEILTERT 176
E+KS K+ + ++ K+ ND + Q SR+ E K+K K+ +E++ +
Sbjct: 33 EKKSVEKELKKTKNAEKRKNLNDFLKVMNQQERSRKSAEAKRESKKKIKETERELVQKGK 92
Query: 175 KLLSAKKNNL 146
K +K+ L
Sbjct: 93 KPFYLRKSEL 102
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 28.7 bits (61), Expect = 1.9
Identities = 9/38 (23%), Positives = 25/38 (65%)
Frame = -3
Query: 254 KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 141
+++EK + ++KKEKE+ + + + + ++EK++ +
Sbjct: 353 ERLEKQAEKEKKEKERLEKKQREEKDRLEKKEKKEEEK 390
>SB_22727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 400 SSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF 293
SS DKNR+ NS S + + + +SSN F
Sbjct: 26 SSRNNDKNRNNNSSSRNNDNNNNNDNKSDHSSNNCF 61
>SB_19564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 248 VEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVN 135
VEKNS+ D K DTR + G K + + ++N
Sbjct: 160 VEKNSSMDTTPGSKHDTRGTSGLSKPGKSSRGHLKKIN 197
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = -1
Query: 382 KNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRK-- 209
+N + N ++RK +DEE + +NK D A+ R++ +L ++ +
Sbjct: 1098 ENTAKNLDADRKEDQEDEEVQREGENNKDNTAADV-AETNALKERVQNLLEAVETAKSDL 1156
Query: 208 KLTQEILTERTK 173
K Q+ E TK
Sbjct: 1157 KTLQKEKDETTK 1168
>SB_11458| Best HMM Match : GTP_CDC (HMM E-Value=2.6e-09)
Length = 337
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = -1
Query: 403 ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDAS----ADYQTXSRRLKRI 236
+ T + N ++NS ++ + E + FNDGDA+ + +T R K
Sbjct: 78 DDETVAEMNSTMNSLIDKTHTVHYELFRRNKLEEMGFNDGDANNKSHSLQETYEERRKEY 137
Query: 235 LPEIKRKRKKLTQEIL 188
+ + + K +K+ Q +
Sbjct: 138 MSQFQDKEEKMRQRFV 153
>SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07)
Length = 423
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -3
Query: 266 PNXIKKVEKNSARDKKEKEKTDTR--NSDGTYKTSEREKEQ 150
P+ I VEK + DKKE EK R + KT+E +KE+
Sbjct: 301 PHHIPIVEKTNEEDKKEIEKNQHRPHHIPIVEKTNEEDKEE 341
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -3
Query: 266 PNXIKKVEKNSARDKKEKEKTDTR--NSDGTYKTSEREKEQ 150
P+ I VEK + DK+E EK R + KT+E +KE+
Sbjct: 253 PHHIPIVEKTNEEDKEEIEKNQHRPHHIPIVQKTNEEDKEE 293
Score = 27.1 bits (57), Expect = 5.8
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -3
Query: 266 PNXIKKVEKNSARDKKEKEKTDTR--NSDGTYKTSEREKEQ 150
P+ I VEK + DK+E EK R + KT+E +KE+
Sbjct: 205 PHHIPIVEKTNEEDKEEIEKNQHRPHHIPIVEKTNEEDKEE 245
Score = 27.1 bits (57), Expect = 5.8
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -3
Query: 266 PNXIKKVEKNSARDKKEKEKTDTR--NSDGTYKTSEREKEQ 150
P+ I VEK + DK+E EK R + KT+E +KE+
Sbjct: 229 PHHIPIVEKTNEEDKEEIEKNQHRPHHIPIVEKTNEEDKEE 269
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/70 (21%), Positives = 29/70 (41%)
Frame = -1
Query: 403 ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEI 224
E + + + N E+K K+ E + +NK N+ D + + + +
Sbjct: 1884 EEEDDKKEKKEENEEEEKKKKKKENEEEDDKKNNKEENEEDEKKEKKKKEENEEEDDKKK 1943
Query: 223 KRKRKKLTQE 194
K K+KK +E
Sbjct: 1944 KTKKKKKKEE 1953
>SB_57816| Best HMM Match : Bombesin (HMM E-Value=7.7e-05)
Length = 269
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -1
Query: 379 NRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQ 263
+RS+N GS+ D + S S N + DGD+SA +Q
Sbjct: 223 SRSLNDGSQMAIRRLDGKESASRSLNDTKPDGDSSACWQ 261
>SB_20162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 842
Score = 28.3 bits (60), Expect = 2.5
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -1
Query: 403 ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS-NKSFNDGDASADYQTXSRRLKRILPE 227
E Y+D+NRS +++ + +E ++ NS+ +K + LK L
Sbjct: 511 ELKRYQDRNRSSEGEAQKYARTVEELKNQLNSTQDKLMRQSQEVSRRDEGVVVLKVELAT 570
Query: 226 IKRKRKKLTQEILTERTKLLSAKKN 152
++ K + L +E+ T R L A+ N
Sbjct: 571 LQEKHRLLFEEVQTLRISLEEARAN 595
>SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 245 EKNSARDKKEK-EKTDTRNSDGTYKTSEREKEQSSRV 138
++NSA D KEK EK+ + +GT +++ QS V
Sbjct: 51 DENSASDSKEKREKSKEKPQNGTKSAKGKKRNQSQGV 87
>SB_36968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 27.9 bits (59), Expect = 3.3
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = -1
Query: 373 SVNSGSERKSSGKDEEYSEQNSSNK----SFNDGDASADYQTXSRRLKRILPEIKRKRKK 206
S S ERKS K S + +K S ++ +DY+ R K+ K K+K
Sbjct: 118 SAASSPERKSGNKTHSRSRSKTKSKRLYSSSESSESDSDYKRQKRSKKKKKQMKKEKKKG 177
Query: 205 LTQEILT 185
L + LT
Sbjct: 178 LKKVKLT 184
>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
Length = 323
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -1
Query: 403 ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSR 251
ES+ + N S S +S+G DE Y E + S++S G A D +R
Sbjct: 223 ESNGSDESNESDESNESDESNGSDESY-ESDESDESNESGLAVTDMLVTTR 272
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 224 KKEKEKTDTRNSDGTYK-TSEREKEQSSRVNQ 132
+K++ DT NSDGT+K ++ E E+ V +
Sbjct: 448 RKKRVSNDTLNSDGTWKENADDESEEKDNVRE 479
>SB_7485| Best HMM Match : DUF1582 (HMM E-Value=2.7)
Length = 290
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -1
Query: 358 SERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKK--LTQEILT 185
S+ + +DE + + + S + +++ T +R + R+ P+I R+RK+ T E T
Sbjct: 108 SQHELDDQDENFLQHRLATLSNSHKKTNSNKDTVTRNVNRLNPKIVRQRKRPVFTTE-AT 166
Query: 184 ERTK 173
E T+
Sbjct: 167 EHTR 170
>SB_1148| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 860
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -1
Query: 379 NRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRK 209
+R VN + +DE + +++ +DGD S +R L R EI+R RK
Sbjct: 802 DRMVNEANAHVRLNRDESFEDRSLRLSCDDDGDESRQPSVLARGL-RTATEIERGRK 857
>SB_55817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 980
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +2
Query: 155 LFRAQKFCTFRQ-NFLCQFF--PFPFYLWQNSFQP 250
L+R FCT RQ N + P P+YL+Q QP
Sbjct: 702 LYRYHTFCTKRQSNQYSRLLAVPIPYYLYQAPIQP 736
>SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6)
Length = 159
Score = 27.5 bits (58), Expect = 4.4
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Frame = -3
Query: 254 KKVEKNSARDKKEKEKTDTR----NSDGTYKTSEREKE-QSSRVNQXXXXXXXXXXXXXX 90
K+ E +K+ K+KT+ + T K +E EKE ++ + +
Sbjct: 27 KEAETEKEEEKETKKKTEKEEEKWKQEETEKEAETEKEAETEKEAEKEKKKKTEKEEEKG 86
Query: 89 XXRKVNKETETYSDKDAQTSESERTQSK 6
+ KE ET +K A+T + E T+ +
Sbjct: 87 KQEETGKEAET--EKQAETEKQEETEKE 112
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -3
Query: 269 LPNXIKKVEKNSARDKKEKEKTDTRNS--DGTYKTSEREKEQ 150
L N + ++E+ + ++EKEK+ + S D K+SE EKE+
Sbjct: 918 LINTVSEIEEMRVKAEEEKEKSCSLESQLDELKKSSEEEKER 959
>SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1535
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 244 KRILPEIKRKRKKLTQEILTERTKL--LSAKKNNLLE*IKVR 125
KR+L E K+ KKL + + ER K A+KN ++E + R
Sbjct: 933 KRLLREQKKDLKKLKKSLRKERRKFAKTQARKNKVVEKLSKR 974
>SB_50361| Best HMM Match : RNA_pol_delta (HMM E-Value=2.2)
Length = 240
Score = 27.5 bits (58), Expect = 4.4
Identities = 20/78 (25%), Positives = 32/78 (41%)
Frame = -1
Query: 355 ERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKKLTQEILTERT 176
ERK S DEE ++ S N +D D S D + + L P + +++ +
Sbjct: 143 ERKGSQDDEEPDDEGSDNDG-SDDDGSDDDKKSTDTLPETEPTVINNLHSKAVKVIIKAV 201
Query: 175 KLLSAKKNNLLE*IKVRA 122
K LL +K+ A
Sbjct: 202 SGSIPKDRELLLTLKIEA 219
>SB_40264| Best HMM Match : DUF667 (HMM E-Value=0)
Length = 2074
Score = 27.5 bits (58), Expect = 4.4
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 400 SSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIK 221
+S YR K S++ GSE+ D SE S ++S + AS + + K++ I
Sbjct: 391 TSGYRQKKESISEGSEKYEKDSD-SCSESISRSQSESSLKASGNDSSLGESFKKL--NIN 447
Query: 220 RKRKK 206
+R+K
Sbjct: 448 GQRQK 452
>SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2)
Length = 1716
Score = 27.5 bits (58), Expect = 4.4
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -1
Query: 340 GKDEEYSEQNSSNKSF--NDGDASADYQTXSRRLKRILPEIKRKRKKLTQEILTERTKLL 167
G + + ++ KS+ N GD + +T S + +L KRK LT+E LTE +
Sbjct: 406 GHTGNHGDHYTNRKSYPGNQGDGNDRTKTKSSTQEDLLSRSYDKRK-LTKEQLTETKSSV 464
Query: 166 SAKKN 152
S +K+
Sbjct: 465 SPEKD 469
>SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022)
Length = 1421
Score = 27.1 bits (57), Expect = 5.8
Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Frame = -1
Query: 403 ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEI 224
E YR++ R + ERK ++EE Q + + + R+L+ +
Sbjct: 1271 EEREYREQMRKIAEARERKLQEEEEERRRQEEEQLRAIEEERRRLQEEEERKLREEQKRV 1330
Query: 223 KRKRK-------KLTQEILTERTKLLSAKKNNL 146
+ R+ + QE +T LL ++ N+
Sbjct: 1331 EMARRLEVVARMRAAQEAARRKTTLLRRREENM 1363
>SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14)
Length = 273
Score = 27.1 bits (57), Expect = 5.8
Identities = 18/85 (21%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = -1
Query: 406 AESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPE 227
+ S+ +KN+SV + + KS+ +++ ++NS+ ++ +DG + +K ++ E
Sbjct: 185 SSSNVSDNKNKSVKATTVDKSASENKLKRKRNSAQENLDDG-VKRKKLKDAGAMKSLVKE 243
Query: 226 IK-RKRKKLTQEILTERTKLLSAKK 155
++ K + E++ E+ K K+
Sbjct: 244 LELEKLVEQRSELVQEKQKKKKEKE 268
>SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064)
Length = 1230
Score = 27.1 bits (57), Expect = 5.8
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -1
Query: 337 KDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKKLTQEILTERTKL 170
+DEE +E K+ NDG S + K++ E RKR ++ ++ L K+
Sbjct: 1078 RDEE-AELEKQAKALNDGSNSTKTSSQDLEKKKMKLEEDRKRNEIAKQKLASIRKI 1132
>SB_25324| Best HMM Match : FtsH_ext (HMM E-Value=5.9)
Length = 201
Score = 27.1 bits (57), Expect = 5.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 254 KKVEK-NSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 141
KK+E+ S R+K ++ +TR D YK E E+ SR
Sbjct: 5 KKLEEIKSLREKMKEVAEETRGKDDLYKQLVSEYERMSR 43
>SB_16403| Best HMM Match : Candida_ALS (HMM E-Value=1.7)
Length = 2372
Score = 27.1 bits (57), Expect = 5.8
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = -1
Query: 388 RDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRK 209
R + RSV+ +ERK+ DE+ + + + S ++ LP +RK
Sbjct: 1028 RRRRRSVHRDAERKAQATDEDVTSGEGGGMFHGFSNPIFQRENPSLDIEAALPADQRKSV 1087
Query: 208 KLTQEILTERT-KLLSAKKNNL 146
+ LT T LS+ N+
Sbjct: 1088 ESGLSSLTLSTLSFLSSSSGNM 1109
>SB_11387| Best HMM Match : MFS_1 (HMM E-Value=4.4e-06)
Length = 815
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 360 ARNARVPVKTRSTVNRTPVINPLTTAMHRLTTKPNQ 253
+R RVP + + +T VINP+T R+T NQ
Sbjct: 10 SRRDRVPTRV---ILKTGVINPITEHFTRMTASENQ 42
>SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09)
Length = 1472
Score = 27.1 bits (57), Expect = 5.8
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = -1
Query: 388 RDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG-DASADYQTXSRRLKRILPEIKRKR 212
R K N GS K E ++ + N+S DG + S +Y T ++ +IL E + +
Sbjct: 173 RRKAAKENEGSNIKEDLPLENRPQEVAENESEGDGSEGSDEYATQTQ--AQILRECQNEL 230
Query: 211 KKLTQEILTERTKLLSAKKNNLLE*IKVRAATLG 110
+ T+ I ++T+ + N L+ K+ +LG
Sbjct: 231 VQETKNIQKKKTESPYKQDLNHLDSSKLDERSLG 264
>SB_3052| Best HMM Match : Peptidase_S8 (HMM E-Value=0)
Length = 1124
Score = 27.1 bits (57), Expect = 5.8
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = -1
Query: 406 AESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPE 227
++ S D S +SGS+ S E + + S+ DG ++ ++ P+
Sbjct: 217 SDDSDDDDVTGSNSSGSDDTGSSDAEIKAVEYKSDGETQDGGSNGSGVFILQKPNERRPK 276
Query: 226 IKRKRKKLTQEILTERTKLLSAK-KNNLLE*IKVRAATLGIPRSQTN 89
K K KK +I + + KL++AK K + + ++V R Q N
Sbjct: 277 KKLKYKK-RSKINSHKKKLINAKAKKDATKKVQVAVQETATQRVQVN 322
>SB_646| Best HMM Match : MGAT2 (HMM E-Value=2.1)
Length = 298
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -1
Query: 385 DKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASAD 269
D+N N G++ ++ +E S+ ++ N + ND D D
Sbjct: 218 DENDDENVGNDNENENDNENDSDNDNDNDNDNDNDNDND 256
>SB_41459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1675
Score = 27.1 bits (57), Expect = 5.8
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -1
Query: 355 ERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKKLTQEILTERT 176
E K + Y ++ +N + + S + RRLK LP K QE +TE+
Sbjct: 944 EEGEEKKLKTYYDKYETNTPLDGINKSPEQLMIGRRLKTSLPATADLLKPPGQEEITEKL 1003
Query: 175 KLLSAKKNN 149
K + K+ +
Sbjct: 1004 KKIKEKQKD 1012
>SB_37148| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1073
Score = 27.1 bits (57), Expect = 5.8
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = -1
Query: 376 RSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKKLTQ 197
R VN + +DE + +++ +DGD S +R + R EI+R RK +
Sbjct: 637 RMVNEANAHVRLNRDESFEDRSLRLSCDDDGDESRQPSVLARGV-RTATEIERGRK--ST 693
Query: 196 EILTERTK 173
E+ E +K
Sbjct: 694 EVRAEPSK 701
>SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 406 AESSTYRDKNRSVNSGSERKSSGKDEEYS 320
AES + DK RS+ S ER + KDE ++
Sbjct: 565 AESQSAEDKKRSIKSLIERIPTAKDELFA 593
>SB_25854| Best HMM Match : Vicilin_N (HMM E-Value=5.5)
Length = 128
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 280 ASADYQTXSRRLKRILPEIKRKRKKL 203
AS ++ +RRL I+P + RK++KL
Sbjct: 20 ASFNFSRRTRRLPPIIPPVTRKKRKL 45
>SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061)
Length = 503
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 224 KKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 132
KKE E TR SD + ++ KE SSR+ +
Sbjct: 430 KKENESLQTRLSDAQALSQKQLKESSSRLEE 460
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -1
Query: 385 DKNRSVNSGSERKSSG--KDEEYSEQNSSNKSFNDGDASADYQT 260
D + + NSGS+ SSG + + NS++ + N ++++D T
Sbjct: 181 DNSNTDNSGSDNSSSGNFNSDNSTSDNSTSDNSNSDNSTSDNST 224
>SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1143
Score = 26.6 bits (56), Expect = 7.7
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = -1
Query: 355 ERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXS----RRLKRILPEIKRKRKK-LTQEI 191
+RK + K +YS +S S +DG+ S + S ++ K+ +IK+ RKK + E
Sbjct: 742 KRKETKKSRKYSTTDSDCSS-DDGENSDSSRERSIKKHKKKKKRKKKIKKNRKKTMENES 800
Query: 190 LTERTKLLSAKKN 152
E+ K K N
Sbjct: 801 KNEKNKRGPVKNN 813
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = -3
Query: 254 KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 141
+K EK+++R + + K+D +NSD ++ R +E+ +
Sbjct: 837 EKPEKHTSRPRHDS-KSDKKNSDDKHRRHRRRREKKKQ 873
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -1
Query: 379 NRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQT 260
+RS GS+ S D S +S +S +D D+S +T
Sbjct: 160 DRSSEGGSDSSHSQSDSSSSSSSSDGESGSDSDSSTTSKT 199
>SB_14297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 26.6 bits (56), Expect = 7.7
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = -1
Query: 235 LPEIKRKRKKLTQEILTERTKLLSAKKNNLLE*IKVRAATLGIPRSQTN 89
LP+ + KRK + QE L + T + + +L +++ A +G RS+++
Sbjct: 358 LPDTRTKRKSVCQEDLVDGTVCIGEPSSRVLSEFEIKKA-IGHNRSKSD 405
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -3
Query: 266 PNXIKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQS 147
P +KK + N +KK+K + D+ NSD T K +R+ + S
Sbjct: 71 PTVVKKAKSN---EKKKKPRKDSSNSD-TKKKHKRKGKSS 106
>SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)
Length = 422
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -3
Query: 254 KKVEKNSARDKKEKEKT--DTRNSDGTYKTSEREKEQSSRVNQ 132
+K K +KEKEKT + + S KT + EKE + Q
Sbjct: 153 EKTRKEEKEREKEKEKTKKEEKESREKEKTKKEEKESKEKDKQ 195
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 251 KVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 132
K+E + + + KTD +D TY+ + E E SS V++
Sbjct: 59 KLENSDLQLSDKLAKTDKSTNDSTYEVNMEEIETSSLVSK 98
>SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24)
Length = 683
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -3
Query: 287 RRCIG*LPNXIKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKE 153
RR + L N I E ++ ++EKT+T T + +E+E++
Sbjct: 324 RRFLCILLNVIDAEESQQVEEELQEEKTETEEKTDTEEKTEKEEK 368
>SB_3124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 26.6 bits (56), Expect = 7.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 170 KFCTFRQNFLCQFFPFPFYLWQNSFQ 247
K T +FL +FF + YLWQN Q
Sbjct: 313 KLNTQLADFLRKFFLYHIYLWQNYLQ 338
>SB_842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 26.6 bits (56), Expect = 7.7
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = -1
Query: 364 SGSERKSSG-KDEEYSEQNSSN--KSFNDGDASADYQTXSRRLKRILPEIKRKRKKLTQE 194
SG+ER S+G + + Y N + G+ + + SRR R+L E +R R++
Sbjct: 265 SGAERVSNGIRFQRYIPNGVLNVVRRPRRGEEQNNEEERSRR-PRVLTEEQRVRQRQRDL 323
Query: 193 ILTERTKLL 167
+LTE ++L
Sbjct: 324 VLTEEQRVL 332
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,394,674
Number of Sequences: 59808
Number of extensions: 158309
Number of successful extensions: 1208
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 727815563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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