Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0392.Seq
(406 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 33 0.072
At3g10800.1 68416.m01300 bZIP transcription factor family protei... 32 0.13
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 31 0.22
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 31 0.29
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 31 0.39
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 31 0.39
At5g60800.1 68418.m07628 heavy-metal-associated domain-containin... 30 0.51
At5g53800.1 68418.m06685 expressed protein 30 0.51
At5g25060.1 68418.m02970 RNA recognition motif (RRM)-containing ... 30 0.51
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 30 0.68
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 30 0.68
At2g22795.1 68415.m02704 expressed protein 30 0.68
At1g03080.1 68414.m00282 kinase interacting family protein simil... 30 0.68
At3g52220.1 68416.m05737 expressed protein 29 0.89
At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-conta... 29 0.89
At1g69280.1 68414.m07943 expressed protein 29 0.89
At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing pr... 29 0.89
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 29 1.2
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 29 1.2
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 29 1.6
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 29 1.6
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 28 2.1
At5g25790.1 68418.m03061 tesmin/TSO1-like CXC domain-containing ... 28 2.1
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 28 2.1
At4g29940.1 68417.m04259 pathogenesis-related homeodomain protei... 28 2.7
At3g60110.1 68416.m06712 DNA-binding bromodomain-containing prot... 28 2.7
At1g56660.1 68414.m06516 expressed protein 28 2.7
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 28 2.7
At4g25880.2 68417.m03722 pumilio/Puf RNA-binding domain-containi... 27 3.6
At4g25880.1 68417.m03721 pumilio/Puf RNA-binding domain-containi... 27 3.6
At4g09890.1 68417.m01620 expressed protein 27 3.6
At4g00990.1 68417.m00133 transcription factor jumonji (jmjC) dom... 27 3.6
At1g73860.1 68414.m08552 kinesin motor protein-related similar t... 27 3.6
At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger) fa... 27 3.6
At5g62750.1 68418.m07877 expressed protein predicted proteins, C... 27 4.8
At5g59050.1 68418.m07398 expressed protein 27 4.8
At5g57610.1 68418.m07197 protein kinase family protein similar t... 27 4.8
At5g51410.2 68418.m06374 LUC7 N_terminus domain-containing prote... 27 4.8
At5g51410.1 68418.m06373 LUC7 N_terminus domain-containing prote... 27 4.8
At4g14290.1 68417.m02202 expressed protein contains Interpro ent... 27 4.8
At3g48860.2 68416.m05337 expressed protein 27 4.8
At3g48860.1 68416.m05336 expressed protein 27 4.8
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 27 4.8
At5g60030.1 68418.m07527 expressed protein 27 6.3
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 26 8.3
At4g37210.2 68417.m05267 tetratricopeptide repeat (TPR)-containi... 26 8.3
At4g37210.1 68417.m05268 tetratricopeptide repeat (TPR)-containi... 26 8.3
At4g33740.2 68417.m04791 expressed protein 26 8.3
At4g33740.1 68417.m04790 expressed protein 26 8.3
At4g32820.1 68417.m04668 expressed protein ; expression supporte... 26 8.3
At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-contain... 26 8.3
At4g21660.1 68417.m03138 proline-rich spliceosome-associated (PS... 26 8.3
At3g58840.1 68416.m06558 expressed protein 26 8.3
At2g33480.1 68415.m04104 no apical meristem (NAM) family protein... 26 8.3
At1g72120.1 68414.m08336 proton-dependent oligopeptide transport... 26 8.3
At1g65280.1 68414.m07402 DNAJ heat shock N-terminal domain-conta... 26 8.3
At1g56290.1 68414.m06471 CwfJ-like family protein contains Pfam ... 26 8.3
At1g55460.1 68414.m06343 Kin17 DNA-binding protein-related conta... 26 8.3
At4g37730.1 68417.m05342 bZIP transcription factor family protei... 24 9.6
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 33.1 bits (72), Expect = 0.072
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = -3
Query: 254 KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQXXXXXXXXXXXXXXXXRKV 75
KK KNS KKE++K + N++ K + +KE + N
Sbjct: 948 KKESKNSNMKKKEEDKKEYVNNE-LKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSA 1006
Query: 74 --NKETETYSDKDAQTSESERTQSKK 3
N+E + Y +K ++T E + + KK
Sbjct: 1007 SKNREKKEYEEKKSKTKEEAKKEKKK 1032
Score = 28.3 bits (60), Expect = 2.1
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = -1
Query: 403 ESSTYRDKNRSVNSGSERKSSGKDEEYSE-QNSSNKSFNDGDASADYQTXSRRLKRILPE 227
ES KNR E+KS K+E E + S +K + D+ + S++ K +
Sbjct: 1001 ESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSE---ERKSKKEKEESRD 1057
Query: 226 IKRKRKKLTQEILTERTKLLSAKKNNLLE 140
+K K+K+ + E S KK + E
Sbjct: 1058 LKAKKKEEETKEKKESENHKSKKKEDKKE 1086
>At3g10800.1 68416.m01300 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; contains similarity to TGACG-sequence specific
DNA-binding protein TGA-1B (HSBF) GB:P14233 [Nicotiana
tabacum]
Length = 675
Score = 32.3 bits (70), Expect = 0.13
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = -1
Query: 403 ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF---NDGDASADYQTXSRRLK-RI 236
ESS ++ + S SSG+ Q S +KS N+GD D + R+++ R
Sbjct: 143 ESSNHQKSSVSKRKKENGDSSGELRSCKYQKSDDKSVATNNEGDDDDDKRKLIRQIRNRE 202
Query: 235 LPEIKRKRKKLTQEILTERTKLLSA 161
++ R RKK E L + K ++A
Sbjct: 203 SAQLSRLRKKQQTEELERKVKSMNA 227
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 31.5 bits (68), Expect = 0.22
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -3
Query: 254 KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 132
KK ++ +A+DKKEKEK D + K +EKE+ ++ +
Sbjct: 65 KKDKEKAAKDKKEKEKKDKEEKEKKDK-ERKEKEKKDKLEK 104
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles PF01846:
FF domain, PF00397: WW domain
Length = 946
Score = 31.1 bits (67), Expect = 0.29
Identities = 19/81 (23%), Positives = 31/81 (38%)
Frame = -3
Query: 245 EKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQXXXXXXXXXXXXXXXXRKVNKE 66
EK +DK+ +EK R + + S+RE+ RK +
Sbjct: 816 EKRKDKDKERREKEREREKEKGKERSKREESDGETAMDVSEGHKDEKRKGKDRDRKHRRR 875
Query: 65 TETYSDKDAQTSESERTQSKK 3
SD+D + +R +SKK
Sbjct: 876 HHNNSDEDVSSDRDDRDESKK 896
Score = 28.7 bits (61), Expect = 1.6
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -3
Query: 254 KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQ 150
+KV K RD+KEK K ++ + K EREKE+
Sbjct: 804 EKVRKEKERDEKEKRK--DKDKERREKEREREKEK 836
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 30.7 bits (66), Expect = 0.39
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Frame = -1
Query: 397 STYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKR 218
+T RD+ +N+ S R SS +E +E+ S+ Y T +R +++ + IK+
Sbjct: 1087 ATVRDEK--INTKSMRNSSEDEECMTEKRCSH-----------YSTATRDIEKTISGIKK 1133
Query: 217 KRKKLTQEILTE----RTKLLS--AKKNNLLE*IK-VRAATLGIPRSQTN 89
K KK Q+++ E + +LL+ A K LE K V AA + I S+T+
Sbjct: 1134 KYKKQVQKLVQEHEEKKMELLNMYADKKQKLETSKSVEAAVIRITCSRTS 1183
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 30.7 bits (66), Expect = 0.39
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Frame = -1
Query: 397 STYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKR 218
+T RD+ +N+ S R SS +E +E+ S+ Y T +R +++ + IK+
Sbjct: 1087 ATVRDEK--INTKSMRNSSEDEECMTEKRCSH-----------YSTATRDIEKTISGIKK 1133
Query: 217 KRKKLTQEILTE----RTKLLS--AKKNNLLE*IK-VRAATLGIPRSQTN 89
K KK Q+++ E + +LL+ A K LE K V AA + I S+T+
Sbjct: 1134 KYKKQVQKLVQEHEEKKMELLNMYADKKQKLETSKSVEAAVIRITCSRTS 1183
>At5g60800.1 68418.m07628 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 283
Score = 30.3 bits (65), Expect = 0.51
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 254 KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKE 153
KKV+ S + KKEKEK + +D K SE +K+
Sbjct: 86 KKVDLVSPQPKKEKEKENKNKNDEDKKKSEEKKK 119
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 30.3 bits (65), Expect = 0.51
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = -3
Query: 245 EKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 132
E+ R +K+K+K + + DG K E++K++S +V +
Sbjct: 146 ERKRRRREKDKKKRNKSDKDGDKKRKEKKKKKSEKVKK 183
>At5g25060.1 68418.m02970 RNA recognition motif (RRM)-containing
protein KIAA0332 - Homo sapiens, EMBL:AB002330
Length = 946
Score = 30.3 bits (65), Expect = 0.51
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 254 KKVEKNSARDK-KEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 132
K+ EK ++ +E+EK TRN D + +RE+E R NQ
Sbjct: 100 KEPEKKREEERPREREKGKTRNIDNFMEELKREQEMRERRNQ 141
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 29.9 bits (64), Expect = 0.68
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 257 IKKVEKNSARDKKEKEKTDTRNSDGTY 177
+K+ E+ + DKK KEK D RN+ TY
Sbjct: 550 VKEAEEFAEEDKKVKEKIDARNALETY 576
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 29.9 bits (64), Expect = 0.68
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 257 IKKVEKNSARDKKEKEKTDTRNSDGTY 177
+K+ E+ + DKK KEK D RN+ TY
Sbjct: 550 VKEAEEFAEEDKKVKEKIDARNALETY 576
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.9 bits (64), Expect = 0.68
Identities = 17/80 (21%), Positives = 34/80 (42%)
Frame = -3
Query: 242 KNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQXXXXXXXXXXXXXXXXRKVNKET 63
K+ +K EKE+ ++ +T +EKE+SS + ++ KE
Sbjct: 540 KDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEK 599
Query: 62 ETYSDKDAQTSESERTQSKK 3
E + +++ E T+ K+
Sbjct: 600 ENEKIEKEESASQEETKEKE 619
Score = 29.5 bits (63), Expect = 0.89
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = -3
Query: 242 KNSARDKKEKEKTDTRNSDGTYKTSEREKEQ-SSRVNQXXXXXXXXXXXXXXXXRKVNKE 66
K +K EKE++ ++ +T +EKE+ SS +Q K E
Sbjct: 597 KEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENVNTESEKKEQVEENEKKTDE 656
Query: 65 TETYSDKDAQTSESERTQSKK 3
+ S K+ S++E+ QS++
Sbjct: 657 DTSESSKENSVSDTEQKQSEE 677
Score = 27.1 bits (57), Expect = 4.8
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Frame = -3
Query: 254 KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQXXXXXXXXXXXXXXXXRKV 75
+K+E + + KEKE + + + EKE ++ N+ K
Sbjct: 491 EKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKE 550
Query: 74 NKETETYS-DKDAQTSESERTQSKK 3
++ S + + +T E E + S++
Sbjct: 551 EASSQEESKENETETKEKEESSSQE 575
>At1g03080.1 68414.m00282 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 29.9 bits (64), Expect = 0.68
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -1
Query: 328 EYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKKLTQEILTERTKL 170
+Y EQ N N+ A+ + L L EIK +++ L QE+ TER ++
Sbjct: 1266 DYDEQVKKNSHSNE--ANLKLEADLMNLLMELEEIKVEKENLNQELFTERNEI 1316
>At3g52220.1 68416.m05737 expressed protein
Length = 237
Score = 29.5 bits (63), Expect = 0.89
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 266 PNXIKKVEKNSARDKKEK-EKTDTRNSDGTYKTSEREKEQSSR 141
P +K E++ R+K+E+ EK R+SD K + +KE+ R
Sbjct: 189 PAKREKEERHDRREKRERHEKRSARDSDDRKKHKKEKKEKKRR 231
>At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-containing
protein low similarity to SP|Q27974 Auxilin {Bos taurus};
contains Pfam profile PF00226: DnaJ domain
Length = 1448
Score = 29.5 bits (63), Expect = 0.89
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = -1
Query: 397 STYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASAD-YQTXSRRLKRILPEIK 221
S+ ++ S +SG+E KSSG + N + + A ++ +Q S R L E K
Sbjct: 1278 SSSGERRGSSSSGTENKSSGPS---NSSNQTGEPIQRCKARSERHQRTSDRAAEALAE-K 1333
Query: 220 RKRKKLTQEILTERTKLLSA 161
+ R TQ+ TER +L A
Sbjct: 1334 KLRDLKTQKEQTERNRLAEA 1353
>At1g69280.1 68414.m07943 expressed protein
Length = 400
Score = 29.5 bits (63), Expect = 0.89
Identities = 17/68 (25%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = -1
Query: 355 ERKSSGK-DEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKKLTQEILTER 179
E K+SG+ +++ S N S ++ D + S + + ++ + + K+K+KK T++ +T++
Sbjct: 231 EDKASGECEDKSSNSNVSWRNIGDCNNSDETPSSTQSFSYPITKKKKKKKKATKKKMTQQ 290
Query: 178 TKLLSAKK 155
+ KK
Sbjct: 291 QQQQKQKK 298
>At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing
protein contains Pfam profile PF01429: Methyl-CpG
binding domain
Length = 384
Score = 29.5 bits (63), Expect = 0.89
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -1
Query: 358 SERKSSGKDEEYSEQNSSNKSFN-DGDASADYQTXSRRLKRILPEIKRKRKKLTQEILTE 182
+E K S E EQN + N D DA AD S+ E + ++ TQE +
Sbjct: 267 TENKGSVTTEANGEQNVTLGEPNLDADAEADKGKESKEYDEKTTEAEANKENDTQESDEK 326
Query: 181 RTKLLSAKKNNLLE 140
+T+ + K+N E
Sbjct: 327 KTEAAANKENETQE 340
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -1
Query: 352 RKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRK 209
R + E + SNK+F+ GD S +R+ + IKRKR+
Sbjct: 179 RAHDAAEREKGKSKKSNKNFSPGDVSDREAKETRKKESNEKRIKRKRR 226
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -1
Query: 352 RKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRK 209
R + E + SNK+F+ GD S +R+ + IKRKR+
Sbjct: 179 RAHDAAEREKGKSKKSNKNFSPGDVSDREAKETRKKESNEKRIKRKRR 226
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9 (SP:Q9NSI6)
{Homo sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (4 copies)
Length = 1677
Score = 28.7 bits (61), Expect = 1.6
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = -1
Query: 385 DKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKK 206
D+N S + E SSGK++E ++S +S + S + L+R KRK+ K
Sbjct: 785 DENDSEYNVPEEYSSGKEQECLNSSTSGESGSSSGESYEDDDHQNSLRR----SKRKKHK 840
Query: 205 LTQEILTERTKLLSAKKNNLLE 140
I+T + + + + LE
Sbjct: 841 KEAGIMTSSGRRVKKRNFDELE 862
>At1g76780.1 68414.m08935 expressed protein ; expression supported by
MPSS
Length = 1871
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 355 ERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSR 251
E K S + E+Y++QN + ND D +Y R
Sbjct: 1516 EEKGSDQAEKYAKQNKIQEVMNDEDKKEEYHISER 1550
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = -3
Query: 230 RDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ-XXXXXXXXXXXXXXXXRKVNKETETY 54
+D+ EK+K R + + ERE+E+ R + K+ KE E
Sbjct: 136 KDRHEKQKEREREREKLEREKEREREKIEREKEREREKMEREIFEREKDRLKLEKEREIE 195
Query: 53 SDKDAQTSESERTQSKK 3
+++ + E E++ K+
Sbjct: 196 REREREKIEREKSHEKQ 212
>At5g25790.1 68418.m03061 tesmin/TSO1-like CXC domain-containing
protein similar to SP|Q9Y4I5 Tesmin
(Metallothionein-like 5, testis-specific) {Homo
sapiens}; contains Pfam profile PF03638:
Tesmin/TSO1-like CXC domain
Length = 408
Score = 28.3 bits (60), Expect = 2.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 245 EKNSARDKKEKEKTDTRNSDGTYKTSERE 159
++ SAR K +EK DT S G Y ER+
Sbjct: 305 KETSARVKTSQEKEDTDTSSGIYLEQERQ 333
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/80 (22%), Positives = 33/80 (41%)
Frame = -3
Query: 242 KNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQXXXXXXXXXXXXXXXXRKVNKET 63
K +K+EKE + ++ + +EKE SS + ++ N+
Sbjct: 349 KEEEPEKREKEDSSSQEESKEEEPENKEKEASSSQEENEIKETEIKEKEESSSQEGNENK 408
Query: 62 ETYSDKDAQTSESERTQSKK 3
ET K +++ E T S+K
Sbjct: 409 ET-EKKSSESQRKENTNSEK 427
>At4g29940.1 68417.m04259 pathogenesis-related homeodomain protein
(PRHA) identical to Pathogenesis-related homeodomain
protein (PRHA) (SP:P48785) [Arabidopsis thaliana)
Length = 796
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 248 VEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRV 138
VE+N K KE + +S+ + KT+ EKE S++
Sbjct: 619 VEENETESKMMKEPHEELSSEMSLKTAAEEKETESKM 655
>At3g60110.1 68416.m06712 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 438
Score = 27.9 bits (59), Expect = 2.7
Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Frame = -3
Query: 257 IKKVEKNSARDKKEKEKTDTRNSDGTY-KTSEREKEQSSRVNQXXXXXXXXXXXXXXXXR 81
+K+++KNS + KE + + +DG K ++ +K+ V + +
Sbjct: 333 LKRIKKNSPQKGKETTSKNQKKNDGNVKKENDHQKKSDGNVKKENSKVKPRELRSSTGKK 392
Query: 80 KVNKETET--YSDKDAQTSESERTQSKK 3
KV E S K QT E+ + K
Sbjct: 393 KVEVENNNSKSSSKRKQTKETAEVATGK 420
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 254 KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQ 150
KK E++S + KK+KEK +N D K + + ++
Sbjct: 48 KKDEESSGKSKKDKEKKKGKNVDSEVKEDKDDDKK 82
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/77 (19%), Positives = 33/77 (42%)
Frame = -1
Query: 403 ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEI 224
E + + R + +ERK E+ E++ K D+ DY + E
Sbjct: 18 EEADLKKSRRDRDRSNERKKDKGSEKRREKDRRKKRVKSSDSEDDYDRDDDEEREKRKEK 77
Query: 223 KRKRKKLTQEILTERTK 173
+R+R++ ++ + R++
Sbjct: 78 ERERRRRDKDRVKRRSE 94
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 245 EKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 132
E+ ++ KE+ DG EREKE+ SR N+
Sbjct: 160 EREEREKERVKERERREREDGERDRREREKERGSRRNR 197
>At4g25880.2 68417.m03722 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile:PF00806 Pumilio-family RNA
binding domains
Length = 852
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 346 SSGKDEEYSEQNSSNKSFNDGDASADYQTXS 254
SSG+ ++S NSSN N D S ++ S
Sbjct: 169 SSGQTPQHSRSNSSNGEVNTADESGNFSELS 199
>At4g25880.1 68417.m03721 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile:PF00806 Pumilio-family RNA
binding domains
Length = 861
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 346 SSGKDEEYSEQNSSNKSFNDGDASADYQTXS 254
SSG+ ++S NSSN N D S ++ S
Sbjct: 169 SSGQTPQHSRSNSSNGEVNTADESGNFSELS 199
>At4g09890.1 68417.m01620 expressed protein
Length = 87
Score = 27.5 bits (58), Expect = 3.6
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = -1
Query: 349 KSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKKLTQEILTERTKL 170
K S EYS S+++ D + S Y + PE+KRK++ + + KL
Sbjct: 3 KGSKSYTEYSSSFSTDEFGYDQNRSNSYNFNGPCINTD-PEMKRKKRVASYNLFATEEKL 61
Query: 169 LSAKKNN 149
S KN+
Sbjct: 62 KSTLKNS 68
>At4g00990.1 68417.m00133 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 840
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = -1
Query: 382 KNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKKL 203
+N+S+ E K KD+ +E+ S+N S G A+ S+ P + + +
Sbjct: 600 ENKSMKEVDESKKDLKDKAANEEQSNNSSRPSGSGEAEKVIISKEDNPTQPAVSTSVESI 659
Query: 202 TQEIL 188
++ L
Sbjct: 660 QEQKL 664
>At1g73860.1 68414.m08552 kinesin motor protein-related similar to
kinesin-C GB:AAF04841 from [Strongylocentrotus
purpuratus]
Length = 1030
Score = 27.5 bits (58), Expect = 3.6
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = -1
Query: 355 ERKSSGKDEEYSEQNSSNKSFNDGDASA--DYQTXSRRLKRILPEIKRKRKKLTQEILTE 182
E+KS + +S++ S KSF D + A + ++ SR +K+ + +++ ++ +
Sbjct: 419 EKKSESNHQRWSQKELSYKSFIDNQSQALLELRSYSRSIKQEILKVQENYTDQFSQLGKK 478
Query: 181 RTKLLSAKKN 152
+L +A +N
Sbjct: 479 LIELSNAAEN 488
>At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 327
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -1
Query: 403 ESSTYRDKNRSVNSGSERKSSGKDEEYSE 317
++ + R+ RS + GSER+ GK++E+ E
Sbjct: 288 QARSSREGYRSGSVGSERRGKGKEKEFGE 316
>At5g62750.1 68418.m07877 expressed protein predicted proteins,
Caenorhabditis elegans
Length = 124
Score = 27.1 bits (57), Expect = 4.8
Identities = 18/80 (22%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Frame = -1
Query: 358 SERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRR-----LKRILPEIKRKRKKLTQE 194
+E+K KD++ ++N +K+ G+ D + S++ K PE K+ +KL +
Sbjct: 24 AEKKEKKKDKDKKDKNEDDKN-GGGEEGEDQEKKSKKKDKKAKKEKNPEDKKDPEKLKMK 82
Query: 193 I--LTERTKLLSAKKNNLLE 140
+ + E+ + + KK+ +++
Sbjct: 83 LQKIEEKIQAMVLKKDEIVK 102
>At5g59050.1 68418.m07398 expressed protein
Length = 312
Score = 27.1 bits (57), Expect = 4.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 269 LPNXIKKVEKNSARDKKEKEKTDTRNSD 186
+ + I+ ++ N + KKEKEK RN+D
Sbjct: 141 IDDQIRSIQANFQKIKKEKEKERQRNAD 168
>At5g57610.1 68418.m07197 protein kinase family protein similar to
protein kinase [Glycine max] GI:170047, MAP3K delta-1
protein kinase [Arabidopsis thaliana] GI:2253010;
contains Pfam profile: PF00069 Eukaryotic protein kinase
domain
Length = 1054
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 345 VPVKTRSTVNRTPVINPLTTAMHRLTTKPNQ 253
+P++ TVN+T + NP+ TA T NQ
Sbjct: 521 LPMQINGTVNQTVIRNPIETAPRYSTGMENQ 551
>At5g51410.2 68418.m06374 LUC7 N_terminus domain-containing protein
similar to cisplatin resistance-associated overexpressed
protein [Homo sapiens] GI:6899846; contains Pfam profile
PF03194: LUC7 N_terminus
Length = 334
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 245 EKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 141
E+ +A+DK ++E+ R + K REKE S+
Sbjct: 231 EQKAAKDKGKEEERLVRGKEADDKRKPREKESESK 265
>At5g51410.1 68418.m06373 LUC7 N_terminus domain-containing protein
similar to cisplatin resistance-associated overexpressed
protein [Homo sapiens] GI:6899846; contains Pfam profile
PF03194: LUC7 N_terminus
Length = 334
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 245 EKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 141
E+ +A+DK ++E+ R + K REKE S+
Sbjct: 231 EQKAAKDKGKEEERLVRGKEADDKRKPREKESESK 265
>At4g14290.1 68417.m02202 expressed protein contains Interpro entry
IPR000379
Length = 534
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 257 IKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKE 153
+K +E KKE +T+T S+G S E E
Sbjct: 452 LKDMEVEQTHQKKEPSRTNTETSEGNAAASTTEPE 486
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 27.1 bits (57), Expect = 4.8
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = -1
Query: 403 ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEI 224
+ + R + ++N ++KS GKDEE S ++ D + T + RL+ E
Sbjct: 273 KEAALRQREAALNVAKQKKS-GKDEEIVSLRSELENLKD-----EATTAAERLQEAESEA 326
Query: 223 KRKRKKLTQEILTE 182
K R + ILT+
Sbjct: 327 KSLRTMTQRMILTQ 340
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 27.1 bits (57), Expect = 4.8
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = -1
Query: 403 ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEI 224
+ + R + ++N ++KS GKDEE S ++ D + T + RL+ E
Sbjct: 273 KEAALRQREAALNVAKQKKS-GKDEEIVSLRSELENLKD-----EATTAAERLQEAESEA 326
Query: 223 KRKRKKLTQEILTE 182
K R + ILT+
Sbjct: 327 KSLRTMTQRMILTQ 340
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 27.1 bits (57), Expect = 4.8
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 358 SERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLK 242
++ K KDEE E+N + K+ G + D T SR L+
Sbjct: 4581 ADEKPWNKDEEDEEENMNEKN-ESGPSIVDKDTRSRELR 4618
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 254 KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQS 147
KK + D+KEKEK + G K +++K +S
Sbjct: 218 KKNKDEDVVDEKEKEKLEDEQRSGERKKEKKKKRKS 253
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 26.2 bits (55), Expect = 8.3
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = -1
Query: 385 DKNRSVNSGSERKSS-GKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKR--ILPEIKRK 215
D+ R R S+ G+++E S + +F + +S++ S + PE K+K
Sbjct: 669 DEGREPEKSPTRSSTEGRNKENGFGQSKSFAFGEQGSSSNNTGGSTTTNNNNLTPETKKK 728
Query: 214 RKKLTQEILTERTKLLSAKKNN 149
+KKL+ + + LS KK++
Sbjct: 729 KKKLS--LFPKVFMFLSRKKSH 748
>At4g37210.2 68417.m05267 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q02508 Protein HGV2
Halocynthia roretzi; contains Pfam profile PF00515 TPR
Domain
Length = 377
Score = 26.2 bits (55), Expect = 8.3
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -1
Query: 406 AESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASAD 269
A S D R +S + S GKD+ ++ + +D D AD
Sbjct: 164 APSVVSGDPERQGSSSGQEGSGGKDQGEDGEDCQDDDLSDADGDAD 209
>At4g37210.1 68417.m05268 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q02508 Protein HGV2
Halocynthia roretzi; contains Pfam profile PF00515 TPR
Domain
Length = 492
Score = 26.2 bits (55), Expect = 8.3
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -1
Query: 406 AESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASAD 269
A S D R +S + S GKD+ ++ + +D D AD
Sbjct: 164 APSVVSGDPERQGSSSGQEGSGGKDQGEDGEDCQDDDLSDADGDAD 209
>At4g33740.2 68417.m04791 expressed protein
Length = 227
Score = 26.2 bits (55), Expect = 8.3
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = -1
Query: 385 DKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKK 206
DKN+ +E E E + ++S N GD D +T + + E K K+
Sbjct: 134 DKNKQGEEVAEEDEEENKHEEDEIDEQDQSKNAGDTDKDDETLEEEKESGMSENDEKEKE 193
>At4g33740.1 68417.m04790 expressed protein
Length = 227
Score = 26.2 bits (55), Expect = 8.3
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = -1
Query: 385 DKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKK 206
DKN+ +E E E + ++S N GD D +T + + E K K+
Sbjct: 134 DKNKQGEEVAEEDEEENKHEEDEIDEQDQSKNAGDTDKDDETLEEEKESGMSENDEKEKE 193
>At4g32820.1 68417.m04668 expressed protein ; expression supported
by MPSS
Length = 1817
Score = 26.2 bits (55), Expect = 8.3
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -3
Query: 263 NXIKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 141
N +K + +K E KT+++ + REKEQS +
Sbjct: 854 NEVKSFLEEVHVEKNENNKTESKKDGSEEQVGYREKEQSEQ 894
>At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-containing
protein-related / RhoGAP domain-containing protein
contains Pfam domain, PF00620: RhoGAP domain
Length = 902
Score = 26.2 bits (55), Expect = 8.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 367 NSGSERKSSGKDEEYSEQNSSNKSFNDGDASAD 269
+ GS+ DEE +N SN S+++ AS D
Sbjct: 445 DDGSQGSEDYTDEEEDLENESNGSYSESAASED 477
>At4g21660.1 68417.m03138 proline-rich spliceosome-associated (PSP)
family protein similar to SP|Q13435 Splicing factor 3B
subunit 2 (Spliceosome associated protein 145) (SAP 145)
(SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa
subunit) {Homo sapiens}; contains Pfam profiles PF04046:
PSP, PF04037: Domain of unknown function (DUF382)
Length = 584
Score = 26.2 bits (55), Expect = 8.3
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = -1
Query: 337 KDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKKLTQEILTERTKLLSAK 158
KDE +++ K +D D+ D Q + K I K+KKL + + K +SA+
Sbjct: 119 KDESEEKEDVKKKVNSDSDSDDDEQDNQNKEK----GISNKKKKLQRRMKIAELKQVSAR 174
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 26.2 bits (55), Expect = 8.3
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = -1
Query: 370 VNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKR--KRKKLTQ 197
V E+ + EE + K + + L + + E+K+ +KKLT+
Sbjct: 170 VREMEEKSKKLRSEEEMREIDDEKKREIEELQKTVIVLNLELVKNVEELKKWKSKKKLTE 229
Query: 196 EILTE---RTKLLSAKKNNLLE 140
E L+E R K L KK+ LL+
Sbjct: 230 EALSETQKREKELELKKDELLK 251
>At2g33480.1 68415.m04104 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
Length = 268
Score = 26.2 bits (55), Expect = 8.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -3
Query: 251 KVEKNSARDKKEKEKTDTRNSDGTYKTSEREKE 153
K NS +KE EK + N T ERE+E
Sbjct: 160 KKRSNSNSKRKEDEKEEVENEKETETEREREEE 192
>At1g72120.1 68414.m08336 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 1095
Score = 26.2 bits (55), Expect = 8.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 192 ISCVSFFLFLFISGRILFNLLDXV 263
+S V FF FLFIS ++ +D V
Sbjct: 1072 VSAVGFFTFLFISKSYIYRRVDVV 1095
>At1g65280.1 68414.m07402 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 598
Score = 26.2 bits (55), Expect = 8.3
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = -3
Query: 245 EKNSARDKKEKEKTDTRNSDG-TYKTSEREKEQSSR----VNQXXXXXXXXXXXXXXXXR 81
E +S+ K K++ + R SDG +Y+ +R K + R + + R
Sbjct: 30 ESDSSSRKWRKKQKERRKSDGGSYEREKRRKREKERKRKKIERKERKRRDMKKKKKTKKR 89
Query: 80 KVNKETETYSDKDAQTSESE 21
+ +TE+YS D+ + + +
Sbjct: 90 EYESDTESYSGSDSFSDQED 109
>At1g56290.1 68414.m06471 CwfJ-like family protein contains Pfam
profiles PF04677: Protein similar to CwfJ N terminus 1,
PF04676: Protein similar to CwfJ N terminus 2
Length = 692
Score = 26.2 bits (55), Expect = 8.3
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -1
Query: 403 ESSTYRDKNRSVNSGSERKSSGK--DEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILP 230
E T +S+ + K+S + D+EY ++ +K ++S++ R+KRI+
Sbjct: 406 EDDTDMHLAKSIMQNKQYKTSNQAADDEYEYGDAPSKKSRKRESSSNIPEKDNRVKRIMT 465
Query: 229 EIKR 218
+ +R
Sbjct: 466 QQER 469
>At1g55460.1 68414.m06343 Kin17 DNA-binding protein-related contains
similarity to zinc finger protein rts2 GB:U16133
GI:563244 from [Saccharomyces cerevisiae]
Length = 411
Score = 26.2 bits (55), Expect = 8.3
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = -1
Query: 376 RSVNSGSERKSSGK----DEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRK 209
+ V +G ER S K DEE + K GD+ + L ++ E ++K++
Sbjct: 230 KQVATGKERGESSKLLFGDEENDKVERGEKRKRSGDSGRSEKERRSALDELMKEEEKKKE 289
Query: 208 KLTQE 194
++ ++
Sbjct: 290 RMNRK 294
>At4g37730.1 68417.m05342 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
Length = 305
Score = 23.8 bits (49), Expect(2) = 9.6
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 370 VNSGSERKSSGKDEEYSEQNSSNKSFNDGDASAD 269
+NSGS +G DE + N +D D S D
Sbjct: 120 INSGSHDMKTGSDESCAGFVKINPRCDDADISND 153
Score = 20.6 bits (41), Expect(2) = 9.6
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = -1
Query: 250 RLKRILPEIKRKRKKLTQEILTERTKLLSAKKNNLLE*IKVRAATLGI 107
R K I PE+ +RK+ E E K +K + ++ ++ + L +
Sbjct: 185 RKKMIQPEMTDERKRKRMESNRESAKRSRMRKQSHIDNLREQVNRLDL 232
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,645,420
Number of Sequences: 28952
Number of extensions: 114097
Number of successful extensions: 858
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 595686720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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