Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0391.Seq
         (398 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D26350-1|BAA05384.1| 2701|Homo sapiens type 2 inositol 1,4,5-tri...    31   1.9  
U01062-1|AAC50064.1| 2671|Homo sapiens human type 3 inositol 1,4...    28   9.9  
D26351-1|BAA05385.1| 2671|Homo sapiens type 3 inositol 1,4,5-tri...    28   9.9  
AL139044-1|CAI16455.1| 2671|Homo sapiens inositol 1,4,5-triphosp...    28   9.9  
AB209739-1|BAD92976.1| 2341|Homo sapiens Inositol 1,4,5-trisphos...    28   9.9  

>D26350-1|BAA05384.1| 2701|Homo sapiens type 2 inositol
            1,4,5-trisphosphate receptor protein.
          Length = 2701

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = -3

Query: 360  LAGSRRVSFHNK---FWDHCPS*RYFWNYIYIHKXVSVRLITSITTRIRYIPSNIVTRYL 190
            + G  R  F NK   F +H  S    W+Y+Y    V V+  T  T    Y+   IV + L
Sbjct: 2564 ICGLERDKFDNKTVSFEEHIKSEHNMWHYLYFIVLVKVKDPTEYTGPESYVAQMIVEKNL 2623

Query: 189  NKLFPKV 169
            +  FP++
Sbjct: 2624 D-WFPRM 2629


>U01062-1|AAC50064.1| 2671|Homo sapiens human type 3 inositol
            1,4,5-trisphosphate receptor protein.
          Length = 2671

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = -3

Query: 360  LAGSRRVSFHNK---FWDHCPS*RYFWNYIYIHKXVSVRLITSITTRIRYIPSNIVTRYL 190
            + G  R  F NK   F +H       WNY+Y    V V+  T  T    Y+   I  + L
Sbjct: 2540 ICGLERDKFDNKTVSFEEHIKLEHNMWNYLYFIVLVRVKNKTDYTGPESYVAQMIKNKNL 2599

Query: 189  NKLFPKV 169
            +  FP++
Sbjct: 2600 D-WFPRM 2605


>D26351-1|BAA05385.1| 2671|Homo sapiens type 3 inositol
            1,4,5-trisphosphate receptor protein.
          Length = 2671

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = -3

Query: 360  LAGSRRVSFHNK---FWDHCPS*RYFWNYIYIHKXVSVRLITSITTRIRYIPSNIVTRYL 190
            + G  R  F NK   F +H       WNY+Y    V V+  T  T    Y+   I  + L
Sbjct: 2540 ICGLERDKFDNKTVSFEEHIKLEHNMWNYLYFIVLVRVKNKTDYTGPESYVAQMIKNKNL 2599

Query: 189  NKLFPKV 169
            +  FP++
Sbjct: 2600 D-WFPRM 2605


>AL139044-1|CAI16455.1| 2671|Homo sapiens inositol 1,4,5-triphosphate
            receptor, type 3 protein.
          Length = 2671

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = -3

Query: 360  LAGSRRVSFHNK---FWDHCPS*RYFWNYIYIHKXVSVRLITSITTRIRYIPSNIVTRYL 190
            + G  R  F NK   F +H       WNY+Y    V V+  T  T    Y+   I  + L
Sbjct: 2540 ICGLERDKFDNKTVSFEEHIKLEHNMWNYLYFIVLVRVKNKTDYTGPESYVAQMIKNKNL 2599

Query: 189  NKLFPKV 169
            +  FP++
Sbjct: 2600 D-WFPRM 2605


>AB209739-1|BAD92976.1| 2341|Homo sapiens Inositol 1,4,5-trisphosphate
            receptor type 3 variant protein.
          Length = 2341

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = -3

Query: 360  LAGSRRVSFHNK---FWDHCPS*RYFWNYIYIHKXVSVRLITSITTRIRYIPSNIVTRYL 190
            + G  R  F NK   F +H       WNY+Y    V V+  T  T    Y+   I  + L
Sbjct: 2210 ICGLERDKFDNKTVSFEEHIKLEHNMWNYLYFIVLVRVKNKTDYTGPESYVAQMIKNKNL 2269

Query: 189  NKLFPKV 169
            +  FP++
Sbjct: 2270 D-WFPRM 2275


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,944,976
Number of Sequences: 237096
Number of extensions: 730623
Number of successful extensions: 1332
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1332
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)