Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0389.Seq
         (413 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   4.4  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   5.8  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   5.8  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    22   7.7  

>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 273 WKFETSKYYVTIIDAPG 323
           W +E  K+  T+I+ PG
Sbjct: 487 WNYEDYKFRTTVINMPG 503


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 213 LGIGQTKG*A*AWYTIDIALWKFETS 290
           +G G+  G A  +YT   A W++E S
Sbjct: 654 VGGGRLNGPADRYYTDPCATWRYEES 679


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = -1

Query: 338 DEISVSRSINDGNIVLASFELPESNIDCIPRSRSAFSLSNTQAYLK 201
           DE+       +G +   S ++PE ++D  PR+ +   + + +A L+
Sbjct: 59  DEMERKLRYVEGEVKKDSVQIPECSVDDWPRAPNPREIIDLEARLE 104


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 148 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 243
           KR I +FE E  +      K+    D LKAER
Sbjct: 319 KRKIGEFEVERDQAAGILAKHDETYDALKAER 350


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 426,396
Number of Sequences: 2352
Number of extensions: 7856
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)