Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0388.Seq
         (412 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022919-1|AAY55335.1|  376|Drosophila melanogaster IP11254p pro...    28   4.2  
BT022400-1|AAY54816.1|  378|Drosophila melanogaster IP11554p pro...    28   4.2  
BT022300-1|AAY54716.1|  378|Drosophila melanogaster IP11354p pro...    28   4.2  
BT022248-1|AAY54664.1|  378|Drosophila melanogaster IP11454p pro...    28   4.2  
AE014134-1298|AAF52530.1|  397|Drosophila melanogaster CG6717-PA...    28   4.2  

>BT022919-1|AAY55335.1|  376|Drosophila melanogaster IP11254p
           protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 142 INTKRNDLVRSILLKHDFEKDASYFIALQYYALAPWKY 255
           I  +   ++R+I+L  DF  D S F+    Y    W Y
Sbjct: 140 ILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLY 177


>BT022400-1|AAY54816.1|  378|Drosophila melanogaster IP11554p
           protein.
          Length = 378

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 142 INTKRNDLVRSILLKHDFEKDASYFIALQYYALAPWKY 255
           I  +   ++R+I+L  DF  D S F+    Y    W Y
Sbjct: 142 ILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLY 179


>BT022300-1|AAY54716.1|  378|Drosophila melanogaster IP11354p
           protein.
          Length = 378

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 142 INTKRNDLVRSILLKHDFEKDASYFIALQYYALAPWKY 255
           I  +   ++R+I+L  DF  D S F+    Y    W Y
Sbjct: 142 ILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLY 179


>BT022248-1|AAY54664.1|  378|Drosophila melanogaster IP11454p
           protein.
          Length = 378

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 142 INTKRNDLVRSILLKHDFEKDASYFIALQYYALAPWKY 255
           I  +   ++R+I+L  DF  D S F+    Y    W Y
Sbjct: 142 ILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLY 179


>AE014134-1298|AAF52530.1|  397|Drosophila melanogaster CG6717-PA
           protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 142 INTKRNDLVRSILLKHDFEKDASYFIALQYYALAPWKY 255
           I  +   ++R+I+L  DF  D S F+    Y    W Y
Sbjct: 161 ILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLY 198


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,643,276
Number of Sequences: 53049
Number of extensions: 188373
Number of successful extensions: 280
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 280
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)