Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0387.Seq
(410 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 96 2e-19
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 96 2e-19
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 94 9e-19
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 85 7e-16
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 62 3e-09
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 57 2e-07
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 54 1e-06
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 52 6e-06
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 51 1e-05
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 47 2e-04
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ... 44 0.002
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 41 0.009
UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barre... 41 0.011
UniRef50_A6DI70 Cluster: Beta-D-galactosidase; n=1; Lentisphaera... 38 0.060
UniRef50_A0M224 Cluster: Beta-galactosidase; n=1; Gramella forse... 36 0.42
UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barre... 34 1.3
UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7... 34 1.3
UniRef50_Q2GPD0 Cluster: Putative uncharacterized protein; n=1; ... 34 1.3
UniRef50_O52847 Cluster: Beta-galactosidase; n=3; Bacillus megat... 34 1.3
UniRef50_Q9K9C6 Cluster: Beta-galactosidase; n=6; Firmicutes|Rep... 34 1.3
UniRef50_Q61343 Cluster: Beta-D-galactosidase fusion protein; n=... 33 1.7
UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio choler... 33 1.7
UniRef50_A7LU08 Cluster: Putative uncharacterized protein; n=1; ... 33 2.3
UniRef50_A5FCG4 Cluster: Beta-galactosidase precursor; n=1; Flav... 33 3.0
UniRef50_A7CVC4 Cluster: Beta-galactosidase; n=1; Opitutaceae ba... 32 4.0
UniRef50_Q2UM73 Cluster: Predicted protein; n=7; Trichocomaceae|... 32 4.0
UniRef50_Q4TB01 Cluster: Chromosome 14 SCAF7218, whole genome sh... 32 5.2
UniRef50_A6G4K3 Cluster: Putative uncharacterized protein; n=1; ... 32 5.2
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 32 5.2
UniRef50_Q1II16 Cluster: Glycoside hydrolase family 2, TIM barre... 31 6.9
UniRef50_Q15NH4 Cluster: Glycoside hydrolase family 2, TIM barre... 31 9.1
UniRef50_A1ZRL9 Cluster: Putative uncharacterized protein; n=1; ... 31 9.1
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 96.3 bits (229), Expect = 2e-19
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 101 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQ 229
ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEW+
Sbjct: 36 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWR 78
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 96.3 bits (229), Expect = 2e-19
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 101 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQ 229
ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEW+
Sbjct: 18 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWR 60
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 94.3 bits (224), Expect = 9e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 101 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQ 229
ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR LNGEW+
Sbjct: 78 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRXLNGEWR 120
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 84.6 bits (200), Expect = 7e-16
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 101 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSL 214
ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSL
Sbjct: 32 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSL 69
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 62.5 bits (145), Expect = 3e-09
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = +2
Query: 101 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEW 226
ENP +TQ +RL AHPPF SWR+ E A+ DRPS Q ++LNG W
Sbjct: 25 ENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQQQTLNGLW 66
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 56.8 bits (131), Expect = 2e-07
Identities = 23/26 (88%), Positives = 26/26 (100%)
Frame = +2
Query: 158 WRNSEEARTDRPSQQLRSLNGEWQIV 235
WRNSEEARTDRPSQQLRSLNGEW+++
Sbjct: 47 WRNSEEARTDRPSQQLRSLNGEWRLM 72
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 53.6 bits (123), Expect = 1e-06
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 101 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQ 229
+NP +T +NRL +H P WR+++ AR PS + SL+GEWQ
Sbjct: 28 QNPAITSVNRLPSHTPLHGWRDADRARRGEPSDAVLSLDGEWQ 70
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 51.6 bits (118), Expect = 6e-06
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -2
Query: 235 YNLPFAIQAAQLLGRAIGAGLFAITPAGERG 143
+ PFAIQAAQLLGRAIGAGLFAITP E G
Sbjct: 8 HQAPFAIQAAQLLGRAIGAGLFAITPEFELG 38
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 50.8 bits (116), Expect = 1e-05
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = +3
Query: 99 GKTLALPNLIALQHIPLSPAGVIAK 173
GKTLALPNLIALQHIPLSPAGVI++
Sbjct: 15 GKTLALPNLIALQHIPLSPAGVISE 39
Score = 35.5 bits (78), Expect = 0.42
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 167 SEEARTDRPSQQLRSLNGEWQI 232
SEEARTDRPSQQLRSL +W++
Sbjct: 38 SEEARTDRPSQQLRSL--KWRM 57
Score = 34.3 bits (75), Expect = 0.98
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 70 HWPSFYNVVTGKPWRYP 120
HWPSFYNVVTGK P
Sbjct: 5 HWPSFYNVVTGKTLALP 21
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 46.8 bits (106), Expect = 2e-04
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +2
Query: 104 NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNG 220
N +T LNRL AHP FASWR+ AR + PS + R L+G
Sbjct: 25 NQTITHLNRLPAHPVFASWRDELAARDNLPSSRRRQLDG 63
>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
uncultured bacterium|Rep: Non-ribosomal peptide
synthetase - uncultured bacterium
Length = 338
Score = 43.6 bits (98), Expect = 0.002
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = -2
Query: 61 YDSL*GELGTGPPLEVDGID 2
YDSL GELGTGPPLEVDGID
Sbjct: 278 YDSLYGELGTGPPLEVDGID 297
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 41.1 bits (92), Expect = 0.009
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +2
Query: 101 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEW 226
ENP Q+N++ AH P ++ E+AR + SQ+ +SLNG+W
Sbjct: 14 ENPITVQVNQVKAHSPLNGFKTIEDARENTQSQK-KSLNGQW 54
>UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1079
Score = 40.7 bits (91), Expect = 0.011
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +2
Query: 56 VVLQFTGRRFTTS*R---ENPGVTQLNRLAAHPPFASWRNSEEART-DRPSQQLRSLNGE 223
++ FTG T + ENP V Q+NRL A S+ E+A T DR ++SLNG+
Sbjct: 17 LLFSFTGSAKTVQVKNDWENPDVIQINRLPARATSYSFDTPEQALTRDRNQSTIQSLNGQ 76
Query: 224 WQ 229
W+
Sbjct: 77 WK 78
>UniRef50_A6DI70 Cluster: Beta-D-galactosidase; n=1; Lentisphaera
araneosa HTCC2155|Rep: Beta-D-galactosidase -
Lentisphaera araneosa HTCC2155
Length = 991
Score = 38.3 bits (85), Expect = 0.060
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2
Query: 101 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQIVSVN 244
ENP LN LA PP S+ + E+A S + SLNG W N
Sbjct: 7 ENPQFVSLNTLAPRPPLYSFDSLEKALEQDQSAYIHSLNGSWNFKLFN 54
>UniRef50_A0M224 Cluster: Beta-galactosidase; n=1; Gramella forsetii
KT0803|Rep: Beta-galactosidase - Gramella forsetii
(strain KT0803)
Length = 1049
Score = 35.5 bits (78), Expect = 0.42
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 101 ENPGVTQLNRLAAHPPFASWRNSEEA--RTDRPSQQLRSLNGEWQ 229
ENP VT +N+L A S+ N + A S +++SLNG WQ
Sbjct: 28 ENPAVTGINKLPARATMYSFSNKQAAINLNKENSDRVKSLNGTWQ 72
>UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Clostridium cellulolyticum H10|Rep: Glycoside
hydrolase family 2, TIM barrel - Clostridium
cellulolyticum H10
Length = 1033
Score = 33.9 bits (74), Expect = 1.3
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +2
Query: 101 ENPGVTQLNRLAAHPPFASWRNSEEARTDR--PSQQLRSLNGEWQ 229
EN +TQ+NR H P+ ++ + E+A + S+ ++SL+G W+
Sbjct: 6 ENQYITQINRYPMHSPYGAYESVEQAMSCNRWTSKYVKSLSGIWK 50
>UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7;
Trichocomaceae|Rep: C6 finger domain protein, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 1148
Score = 33.9 bits (74), Expect = 1.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 75 PVNCNTTHYRANWVPGPPSRSTVS 4
PV N +R W+PGPP+RS +S
Sbjct: 619 PVTDNPPDFRKEWIPGPPTRSVLS 642
>UniRef50_Q2GPD0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 403
Score = 33.9 bits (74), Expect = 1.3
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 85 YNVVTGKPW-RYPT*SPCSTSPFRQLA**RRGPHRSPFPTVAQPEW 219
YN++ P +PT P +T+P + R PHR P P+ +P+W
Sbjct: 279 YNILRAPPTVNHPTTKPATTTPLAMV---RLTPHRDPPPSSLRPKW 321
>UniRef50_O52847 Cluster: Beta-galactosidase; n=3; Bacillus
megaterium|Rep: Beta-galactosidase - Bacillus megaterium
Length = 1034
Score = 33.9 bits (74), Expect = 1.3
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 104 NPGVTQLNRLAAHPPFASWRNSEEA-RTDRPSQ-QLRSLNGEW 226
NP + QLNR AH ++ EEA + DR S +SLNG W
Sbjct: 23 NPEIFQLNRSKAHALLMPYQTVEEALKNDRKSSVYYQSLNGSW 65
>UniRef50_Q9K9C6 Cluster: Beta-galactosidase; n=6; Firmicutes|Rep:
Beta-galactosidase - Bacillus halodurans
Length = 1014
Score = 33.9 bits (74), Expect = 1.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 113 VTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQ 229
V +NRL AH + EEA+ + P SLNG W+
Sbjct: 15 VFAVNRLPAHSDHVYYETVEEAKKEPPMSMRHSLNGHWK 53
>UniRef50_Q61343 Cluster: Beta-D-galactosidase fusion protein;
n=1; Mus musculus|Rep: Beta-D-galactosidase fusion
protein - Mus musculus (Mouse)
Length = 121
Score = 33.5 bits (73), Expect = 1.7
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -3
Query: 42 NWVPGPPSRSTVSI 1
+WVPGPPSRSTVSI
Sbjct: 18 SWVPGPPSRSTVSI 31
>UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio
cholerae|Rep: Beta-galactosidase - Vibrio cholerae
Length = 56
Score = 33.5 bits (73), Expect = 1.7
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 101 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQ 229
+NP + + + H P S+R +EAR D + +SLNG+W+
Sbjct: 14 QNPHIVKWHCRTPHVPLHSYRTEQEARLDVGGNR-QSLNGQWR 55
>UniRef50_A7LU08 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 1046
Score = 33.1 bits (72), Expect = 2.3
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 101 ENPGVTQLNRLAAHPPFASWRNSEEARTDRP--SQQLRSLNGEWQIV 235
ENP + N+ H F + +E+A D+P S SLNG W+ +
Sbjct: 31 ENPAKYEWNKERPHADFRLYEQAEDAVNDKPRKSSWQHSLNGVWKFI 77
>UniRef50_A5FCG4 Cluster: Beta-galactosidase precursor; n=1;
Flavobacterium johnsoniae UW101|Rep: Beta-galactosidase
precursor - Flavobacterium johnsoniae UW101
Length = 1108
Score = 32.7 bits (71), Expect = 3.0
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +2
Query: 101 ENPGVTQLNRLAAHPPFASWRNSEEA-RTDRPSQQLRSLNGEWQI-VSVNI 247
E+P +T +NR + S+ + E+A + DR +++ LNG+W +VN+
Sbjct: 58 EDPTITSINRQPSRATAYSYSSVEDALKGDRTKSRIQMLNGDWDFKYAVNL 108
>UniRef50_A7CVC4 Cluster: Beta-galactosidase; n=1; Opitutaceae
bacterium TAV2|Rep: Beta-galactosidase - Opitutaceae
bacterium TAV2
Length = 1130
Score = 32.3 bits (70), Expect = 4.0
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 101 ENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR--SLNGEWQ 229
E P +T LN+L F + + +EAR + + R SLNG WQ
Sbjct: 11 EAPELTSLNKLPPRATFHGFGSVKEARAGKSEKSTRHHSLNGTWQ 55
>UniRef50_Q2UM73 Cluster: Predicted protein; n=7;
Trichocomaceae|Rep: Predicted protein - Aspergillus
oryzae
Length = 167
Score = 32.3 bits (70), Expect = 4.0
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 143 PPFASWRNSEEARTDRPSQQLRSLNGE 223
PP +S RN E R ++P+ LR+L+GE
Sbjct: 56 PPSSSSRNDESQREEKPAPHLRNLSGE 82
>UniRef50_Q4TB01 Cluster: Chromosome 14 SCAF7218, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 14 SCAF7218, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 970
Score = 31.9 bits (69), Expect = 5.2
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = -3
Query: 216 FRLRNCWEGRSVRASSLLRQLAKGGCAARRLSWVTPGFSRHDVVKRRPVNC 64
F L GRS RA +LLR+ G +R S V G R DVVK + + C
Sbjct: 438 FILEEIRSGRSPRADALLRRTETRGTTSRLSSAVAEGPGR-DVVKLQTMRC 487
>UniRef50_A6G4K3 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 531
Score = 31.9 bits (69), Expect = 5.2
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 75 AVVLQRRDGKTLALPNLIALQHIPLSPAGVIAKRPAPIAL 194
AVV G L LP+L+ PL P G++A++ PIAL
Sbjct: 58 AVVRCTVSGPNLQLPHLVDELATPLPPTGLLARKMDPIAL 97
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 31.9 bits (69), Expect = 5.2
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 75 AVVLQRRDGKTLALPNLIALQHIPLSPAGVIAKRPAP 185
A L+RR+GK P L L+ +PL P G K+ P
Sbjct: 57 AAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKKAPP 93
>UniRef50_Q1II16 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Acidobacteria bacterium Ellin345|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Acidobacteria bacterium (strain Ellin345)
Length = 1049
Score = 31.5 bits (68), Expect = 6.9
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 101 ENPGVTQLNRLAAHPPFASWRNSEEA--RTDRPSQQLRSLNGEWQ 229
ENP V +NR A F + + A R ++PS ++SLNG W+
Sbjct: 26 ENPRVFGINREAPRATFTPFPDEASALKRREQPSVFMQSLNGMWK 70
>UniRef50_Q15NH4 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Pseudoalteromonas atlantica T6c|Rep: Glycoside
hydrolase family 2, TIM barrel - Pseudoalteromonas
atlantica (strain T6c / BAA-1087)
Length = 1045
Score = 31.1 bits (67), Expect = 9.1
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 101 ENPGVTQLNRLAAHPPFASWRNSEEARTDRP--SQQLRSLNGEW 226
+NP V +N+ A F + + + D P SQ SLNGEW
Sbjct: 13 QNPEVFAINKEPARSSFYGFSDDPQGYVDSPFMSQDYLSLNGEW 56
>UniRef50_A1ZRL9 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 284
Score = 31.1 bits (67), Expect = 9.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 186 SVRASSLLRQLAKGGCAARRLSWVTPGFSRHD 91
++ A R+LAK AA L WVTP F +D
Sbjct: 59 AINAGMAYRRLAKPDSAALALGWVTPDFKLYD 90
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,572,932
Number of Sequences: 1657284
Number of extensions: 8442529
Number of successful extensions: 20634
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 20220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20628
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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