Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0387.Seq
         (410 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   0.67 
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   2.0  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    22   2.7  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   4.7  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   4.7  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   4.7  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   6.2  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    20   8.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   8.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   8.2  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 0.67
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 144 PLSPAGVIAKRPAPIALPNSCA 209
           P  P GV  KR  P AL  +CA
Sbjct: 52  PCPPQGVDLKRVLPEALQTNCA 73


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 150 SPAGVIAKRPAPIALPNSCA 209
           +P G   KR  P AL N CA
Sbjct: 54  TPEGEELKRDIPEALQNECA 73


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 150 SPAGVIAKRPAPIALPNSCA 209
           +P+G   K+  P AL N CA
Sbjct: 52  TPSGEELKKDIPDALKNECA 71


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 150 SPAGVIAKRPAPIALPNSCA 209
           +P G   K+  P AL N CA
Sbjct: 53  TPEGEELKKDIPDALQNECA 72


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 150 SPAGVIAKRPAPIALPNSCA 209
           +P G   K+  P AL N CA
Sbjct: 54  TPEGEELKKDIPEALQNGCA 73


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 150 SPAGVIAKRPAPIALPNSCA 209
           +P G   K+  P AL N CA
Sbjct: 54  TPEGEELKKDIPEALQNGCA 73


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 144 PLSPAGVIAKRPAPIALPNSC 206
           P  P G   K  AP+ L  SC
Sbjct: 57  PCDPVGRRLKSLAPLVLRGSC 77


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +2

Query: 131 LAAHPPFASWRNSEEARTDRPSQQLRSLNG 220
           L+ HP   S  ++      +P  Q+R++ G
Sbjct: 256 LSLHPAETSMNDANRNDCAKPLTQIRNIRG 285


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -2

Query: 409 RWSPRSLIVDSCSKLEQHSTLSRSILLIYKGF 314
           R +P +++   C+KL   S    +   + KGF
Sbjct: 33  RGTPLAMLAAQCNKLSNKSPPPLADAAVGKGF 64


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 150 SPAGVIAKRPAPIALPNSCAA 212
           SPA V +   AP+ +P   AA
Sbjct: 43  SPASVASNASAPLHIPAKRAA 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,631
Number of Sequences: 336
Number of extensions: 2009
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)