Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0387.Seq
         (410 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding pr...    24   1.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   3.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    22   7.6  

>AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP17 protein.
          Length = 155

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 234 TICHSPFRLRNCWEGRSVRASSLLRQL 154
           T+C   F L  CW+    + +  LR++
Sbjct: 121 TLCDKAFWLHKCWKQSDPKVNMALRRI 147


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 104 NPGVTQLNRLAAHPPFASWRNS 169
           +PG     +L+ HPP AS R+S
Sbjct: 835 HPGAQTQPQLSQHPPGASGRSS 856


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 144  PLSPAGVIAKRPAPIAL 194
            P SPAGV+  +  P+A+
Sbjct: 1340 PSSPAGVLVAKVPPVAV 1356


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 432,490
Number of Sequences: 2352
Number of extensions: 9057
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)