Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0387.Seq
         (410 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122240-1|AAM52752.1|  124|Drosophila melanogaster SD02058p pro...    27   7.3  
AY051795-1|AAK93219.1|  541|Drosophila melanogaster LD31064p pro...    27   7.3  
AL033125-6|CAA21829.1|  510|Drosophila melanogaster EG:EG0007.7 ...    27   7.3  
AE014298-602|AAF45923.3|  541|Drosophila melanogaster CG6121-PA ...    27   7.3  
AE014296-3146|AAO41235.1|  124|Drosophila melanogaster CG33062-P...    27   7.3  
AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-P...    27   7.3  
AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-P...    27   7.3  
AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-P...    27   7.3  
AE014298-3060|AAF50875.1|  223|Drosophila melanogaster CG11229-P...    27   9.7  
AE014297-1896|AAF55096.2| 1010|Drosophila melanogaster CG7362-PA...    27   9.7  

>AY122240-1|AAM52752.1|  124|Drosophila melanogaster SD02058p
          protein.
          Length = 124

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 93 DVVKRRPVNCNTTHYRANWV 34
          D +K RP NC T H  A WV
Sbjct: 2  DQLKLRPCNCLTAHPLAEWV 21


>AY051795-1|AAK93219.1|  541|Drosophila melanogaster LD31064p
           protein.
          Length = 541

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +3

Query: 117 PNLIALQHIPLSPAGVIAKRPAPIALPNSCA 209
           P   AL  IP +P G     P P  +PNS A
Sbjct: 119 PGSGALAAIPQTPTGASGSVPPPAGIPNSVA 149


>AL033125-6|CAA21829.1|  510|Drosophila melanogaster EG:EG0007.7
           protein.
          Length = 510

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +3

Query: 117 PNLIALQHIPLSPAGVIAKRPAPIALPNSCA 209
           P   AL  IP +P G     P P  +PNS A
Sbjct: 87  PGSGALAAIPQTPTGASGSVPPPAGIPNSVA 117


>AE014298-602|AAF45923.3|  541|Drosophila melanogaster CG6121-PA
           protein.
          Length = 541

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +3

Query: 117 PNLIALQHIPLSPAGVIAKRPAPIALPNSCA 209
           P   AL  IP +P G     P P  +PNS A
Sbjct: 119 PGSGALAAIPQTPTGASGSVPPPAGIPNSVA 149


>AE014296-3146|AAO41235.1|  124|Drosophila melanogaster CG33062-PA
          protein.
          Length = 124

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 93 DVVKRRPVNCNTTHYRANWV 34
          D +K RP NC T H  A WV
Sbjct: 2  DQLKLRPCNCLTAHPLAEWV 21


>AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-PB,
           isoform B protein.
          Length = 1257

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +3

Query: 99  GKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 209
           G   A  +L++  H PL   GVI K   P  LP+S A
Sbjct: 27  GSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 63


>AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-PC,
           isoform C protein.
          Length = 1294

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +3

Query: 99  GKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 209
           G   A  +L++  H PL   GVI K   P  LP+S A
Sbjct: 64  GSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 100


>AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-PD,
           isoform D protein.
          Length = 1272

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +3

Query: 99  GKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 209
           G   A  +L++  H PL   GVI K   P  LP+S A
Sbjct: 42  GSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 78


>AE014298-3060|AAF50875.1|  223|Drosophila melanogaster CG11229-PA
           protein.
          Length = 223

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -3

Query: 135 ARRLSWVTPGFSRHD-VVKRRPVNCNTTHYRANWVPGPPS 19
           A R SW       H  ++    VN + T  R+ W PGPP+
Sbjct: 170 AGRCSWSPSALWSHILIIFSIVVNASATASRSFWFPGPPA 209


>AE014297-1896|AAF55096.2| 1010|Drosophila melanogaster CG7362-PA
           protein.
          Length = 1010

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +3

Query: 81  VLQRRDGKTLALPNL---IALQHIPLSPAGVIAKRPAPIALPNSCAA*MANGKL 233
           +++  DG  +AL N+   IAL+ +PL+   ++AK    +  P  CA  M N  +
Sbjct: 335 IIRESDGIMVALGNMGNEIALEAVPLAQKSIVAK-CNKVGKPVICANQMMNSMI 387


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,772,534
Number of Sequences: 53049
Number of extensions: 380681
Number of successful extensions: 916
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)