Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0386.Seq
(403 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59357-1|CAA42007.1| 128|Homo sapiens Epstein-Barr virus small ... 58 1e-08
D17652-1|BAA04545.1| 128|Homo sapiens HBp15/L22 protein. 58 1e-08
CR456873-1|CAG33154.1| 128|Homo sapiens RPL22 protein. 58 1e-08
BC066314-1|AAH66314.1| 128|Homo sapiens ribosomal protein L22 p... 58 1e-08
BC058887-1|AAH58887.1| 128|Homo sapiens ribosomal protein L22 p... 58 1e-08
BC035566-1|AAH35566.1| 128|Homo sapiens ribosomal protein L22 p... 58 1e-08
AL031847-9|CAI19448.1| 128|Homo sapiens ribosomal protein L22 p... 58 1e-08
AF136171-1|AAP97261.1| 128|Homo sapiens heparin-binding protein... 58 1e-08
BC107708-1|AAI07709.1| 122|Homo sapiens RPL22L1 protein protein. 52 5e-07
BC062731-1|AAH62731.1| 132|Homo sapiens RPL22L1 protein protein. 52 5e-07
AB061849-1|BAB79487.1| 39|Homo sapiens ribosomal protein L22 p... 41 0.001
>X59357-1|CAA42007.1| 128|Homo sapiens Epstein-Barr virus small RNA
associated protein protein.
Length = 128
Score = 58.0 bits (134), Expect = 1e-08
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +2
Query: 149 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGK 250
LKFT+DCTHP ED I+D NFE++L+E +KV GK
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGK 52
>D17652-1|BAA04545.1| 128|Homo sapiens HBp15/L22 protein.
Length = 128
Score = 58.0 bits (134), Expect = 1e-08
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +2
Query: 149 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGK 250
LKFT+DCTHP ED I+D NFE++L+E +KV GK
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGK 52
>CR456873-1|CAG33154.1| 128|Homo sapiens RPL22 protein.
Length = 128
Score = 58.0 bits (134), Expect = 1e-08
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +2
Query: 149 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGK 250
LKFT+DCTHP ED I+D NFE++L+E +KV GK
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGK 52
>BC066314-1|AAH66314.1| 128|Homo sapiens ribosomal protein L22
protein.
Length = 128
Score = 58.0 bits (134), Expect = 1e-08
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +2
Query: 149 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGK 250
LKFT+DCTHP ED I+D NFE++L+E +KV GK
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGK 52
>BC058887-1|AAH58887.1| 128|Homo sapiens ribosomal protein L22
protein.
Length = 128
Score = 58.0 bits (134), Expect = 1e-08
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +2
Query: 149 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGK 250
LKFT+DCTHP ED I+D NFE++L+E +KV GK
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGK 52
>BC035566-1|AAH35566.1| 128|Homo sapiens ribosomal protein L22
protein.
Length = 128
Score = 58.0 bits (134), Expect = 1e-08
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +2
Query: 149 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGK 250
LKFT+DCTHP ED I+D NFE++L+E +KV GK
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGK 52
>AL031847-9|CAI19448.1| 128|Homo sapiens ribosomal protein L22
protein.
Length = 128
Score = 58.0 bits (134), Expect = 1e-08
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +2
Query: 149 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGK 250
LKFT+DCTHP ED I+D NFE++L+E +KV GK
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGK 52
>AF136171-1|AAP97261.1| 128|Homo sapiens heparin-binding protein
HBp15 protein.
Length = 128
Score = 58.0 bits (134), Expect = 1e-08
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +2
Query: 149 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGK 250
LKFT+DCTHP ED I+D NFE++L+E +KV GK
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGK 52
>BC107708-1|AAI07709.1| 122|Homo sapiens RPL22L1 protein protein.
Length = 122
Score = 52.4 bits (120), Expect = 5e-07
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +2
Query: 152 KFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKT 253
+F +D THP ED I D GNFE++L+E VKV GKT
Sbjct: 15 RFNLDLTHPVEDGIFDSGNFEQFLREKVKVNGKT 48
>BC062731-1|AAH62731.1| 132|Homo sapiens RPL22L1 protein protein.
Length = 132
Score = 52.4 bits (120), Expect = 5e-07
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +2
Query: 152 KFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKT 253
+F +D THP ED I D GNFE++L+E VKV GKT
Sbjct: 25 RFNLDLTHPVEDGIFDSGNFEQFLREKVKVNGKT 58
>AB061849-1|BAB79487.1| 39|Homo sapiens ribosomal protein L22
protein.
Length = 39
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 149 LKFTIDCTHPAEDSILDVGNF 211
LKFT+DCTHP ED I+D NF
Sbjct: 19 LKFTLDCTHPVEDGIMDAANF 39
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,027,079
Number of Sequences: 237096
Number of extensions: 931666
Number of successful extensions: 1758
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1758
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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