Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0386.Seq
(403 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42587-1|AAB17433.1| 299|Drosophila melanogaster ribosomal prot... 55 4e-08
BT025837-1|ABF85737.1| 299|Drosophila melanogaster IP11377p pro... 55 4e-08
AY118961-1|AAM50821.1| 299|Drosophila melanogaster LD40873p pro... 55 4e-08
AL132792-4|CAB60023.1| 299|Drosophila melanogaster EG:BACR19J1.... 55 4e-08
AF080131-1|AAD19341.1| 312|Drosophila melanogaster ribosomal pr... 55 4e-08
AE014298-104|AAF45546.1| 299|Drosophila melanogaster CG7434-PA ... 55 4e-08
AY089455-1|AAL90193.1| 312|Drosophila melanogaster AT26853p pro... 46 2e-05
AE013599-3561|AAF46972.1| 312|Drosophila melanogaster CG9871-PA... 46 2e-05
AE013599-1487|AAF58510.2| 246|Drosophila melanogaster CG13154-P... 30 1.0
BT023938-1|ABB36442.1| 1103|Drosophila melanogaster RE04201p pro... 27 7.1
AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p pro... 27 7.1
AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-P... 27 7.1
AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-P... 27 7.1
>U42587-1|AAB17433.1| 299|Drosophila melanogaster ribosomal protein
Rpl22 protein.
Length = 299
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2
Query: 146 NLKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGK 250
+L+FTIDCT+ AEDSI+DV +FEKY+K +KV GK
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGK 224
>BT025837-1|ABF85737.1| 299|Drosophila melanogaster IP11377p
protein.
Length = 299
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2
Query: 146 NLKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGK 250
+L+FTIDCT+ AEDSI+DV +FEKY+K +KV GK
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGK 224
>AY118961-1|AAM50821.1| 299|Drosophila melanogaster LD40873p
protein.
Length = 299
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2
Query: 146 NLKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGK 250
+L+FTIDCT+ AEDSI+DV +FEKY+K +KV GK
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGK 224
>AL132792-4|CAB60023.1| 299|Drosophila melanogaster
EG:BACR19J1.4,FBgn0015288;RpL22 protein.
Length = 299
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2
Query: 146 NLKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGK 250
+L+FTIDCT+ AEDSI+DV +FEKY+K +KV GK
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGK 224
>AF080131-1|AAD19341.1| 312|Drosophila melanogaster ribosomal
protein L22 protein.
Length = 312
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2
Query: 146 NLKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGK 250
+L+FTIDCT+ AEDSI+DV +FEKY+K +KV GK
Sbjct: 203 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGK 237
>AE014298-104|AAF45546.1| 299|Drosophila melanogaster CG7434-PA
protein.
Length = 299
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2
Query: 146 NLKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGK 250
+L+FTIDCT+ AEDSI+DV +FEKY+K +KV GK
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGK 224
>AY089455-1|AAL90193.1| 312|Drosophila melanogaster AT26853p
protein.
Length = 312
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +2
Query: 152 KFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGK 250
+F IDC AED ILD+ +FE+YLK H+K++ K
Sbjct: 193 RFVIDCACVAEDMILDLADFEQYLKTHIKIKNK 225
>AE013599-3561|AAF46972.1| 312|Drosophila melanogaster CG9871-PA
protein.
Length = 312
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +2
Query: 152 KFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGK 250
+F IDC AED ILD+ +FE+YLK H+K++ K
Sbjct: 193 RFVIDCACVAEDMILDLADFEQYLKTHIKIKNK 225
>AE013599-1487|AAF58510.2| 246|Drosophila melanogaster CG13154-PA
protein.
Length = 246
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 8 LLYTCSFATMAVTKKPVAKKAQLH 79
+L+ C+F V K P A++AQLH
Sbjct: 12 VLFLCAFCCSVVAKPPTARRAQLH 35
>BT023938-1|ABB36442.1| 1103|Drosophila melanogaster RE04201p
protein.
Length = 1103
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 361 GNVLLNT-SGTSLKKECLR**RLSSYPWR 278
G+ LNT GT L+ ECL+ R SSY +R
Sbjct: 207 GHGFLNTYKGTELQTECLQLRRASSYQFR 235
>AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p
protein.
Length = 1413
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 361 GNVLLNT-SGTSLKKECLR**RLSSYPWR 278
G+ LNT GT L+ ECL+ R SSY +R
Sbjct: 517 GHGFLNTYKGTELQTECLQLRRASSYQFR 545
>AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-PA,
isoform A protein.
Length = 1413
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 361 GNVLLNT-SGTSLKKECLR**RLSSYPWR 278
G+ LNT GT L+ ECL+ R SSY +R
Sbjct: 517 GHGFLNTYKGTELQTECLQLRRASSYQFR 545
>AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-PB,
isoform B protein.
Length = 1700
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 361 GNVLLNT-SGTSLKKECLR**RLSSYPWR 278
G+ LNT GT L+ ECL+ R SSY +R
Sbjct: 804 GHGFLNTYKGTELQTECLQLRRASSYQFR 832
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,513,028
Number of Sequences: 53049
Number of extensions: 294879
Number of successful extensions: 649
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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