Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0385.Seq
         (414 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1231|AAS65293.1| 1006|Drosophila melanogaster CG12075-P...    28   5.6  
AE014298-1230|AAF46414.3| 1006|Drosophila melanogaster CG12075-P...    28   5.6  

>AE014298-1231|AAS65293.1| 1006|Drosophila melanogaster CG12075-PB,
           isoform B protein.
          Length = 1006

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 174 TSSAAATDILALIQLLMEPGYKCP 245
           TSS    DI+A + LL  P  KCP
Sbjct: 78  TSSVQTDDIVACVLLLYNPATKCP 101


>AE014298-1230|AAF46414.3| 1006|Drosophila melanogaster CG12075-PA,
           isoform A protein.
          Length = 1006

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 174 TSSAAATDILALIQLLMEPGYKCP 245
           TSS    DI+A + LL  P  KCP
Sbjct: 78  TSSVQTDDIVACVLLLYNPATKCP 101


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,056,693
Number of Sequences: 53049
Number of extensions: 323239
Number of successful extensions: 708
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)