Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0385.Seq
         (414 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   1.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   2.4  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   4.2  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   4.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   4.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   5.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   5.5  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   7.3  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   7.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   9.6  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 177 RSCGPGSKLFGFPLSYFAVK 118
           RS    SK  G+PL+Y A K
Sbjct: 132 RSSALASKATGYPLAYVAAK 151


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 123 QQSMRGEIQKAYCLVHRTSSAAATDIL 203
           + ++RGE Q  Y  + +  S  A D+L
Sbjct: 385 ENNLRGETQSNYREMEKRQSVPANDLL 411


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 85  LRCKRSLIRCPFNSKV*EGKSKKL 156
           +RC RSL   PFN  + E + K++
Sbjct: 108 VRCGRSLEGYPFNPCLTEAQYKEM 131


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 85  LRCKRSLIRCPFNSKV*EGKSKKL 156
           +RC RSL   PFN  + E + K++
Sbjct: 124 VRCGRSLEGYPFNPCLTEAQYKEM 147


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
 Frame = +2

Query: 32  LTQWVSVSSIEKVAAK----LPYVAKEA*YDVLLTAKYERGNPKSLLPGPQDL*CSGNRH 199
           L  + S+ SI  +AA+       VA     +V  TAK +   P   +  P D+    N+H
Sbjct: 667 LDPYSSLLSITNLAAEHSGDYTCVAANPAAEVRYTAKLQVKVPPRWIVEPTDVSVERNKH 726

Query: 200 ISSYSASNG 226
           ++ +  + G
Sbjct: 727 VALHCQAQG 735


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 46   YPLRKGSCLHS 14
            YPLR G C H+
Sbjct: 1459 YPLRLGPCWHA 1469


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 294 LMEVEVDTSEFSSPLN 341
           +ME++VD ++   PLN
Sbjct: 861 MMELQVDIADSQQPLN 876


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 315 YRPQLPLEPSHLLKNA 268
           +R  LP+EP H + NA
Sbjct: 77  FRKPLPIEPWHGVLNA 92


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 315 YRPQLPLEPSHLLKNA 268
           +R  LP+EP H + NA
Sbjct: 77  FRKPLPIEPWHGVLNA 92


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +1

Query: 16  CVSKIPYAVGISELNRESCREVALRCKRSLIRC 114
           C S         EL+R +C   +   K  L+RC
Sbjct: 118 CASNGKIYANHCELHRAACHSGSSLTKSRLMRC 150


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,294
Number of Sequences: 438
Number of extensions: 1800
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)