Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0384.Seq
         (627 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.2  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   4.3  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   4.3  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 358 TKYSYYVLCHXCYXGIKY 411
           T  +Y V+C  C  G+KY
Sbjct: 348 TDTTYRVVCDACSMGVKY 365


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 99  SNHDCVIQSVIHLYSCFYIFPLKRNPI 179
           S +D + Q V  L  C Y F    NPI
Sbjct: 288 STYDDINQWVYPLTGCLYYFSTTINPI 314


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 1   VTPYNNYYV 27
           + PYNNYY+
Sbjct: 139 IEPYNNYYI 147


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 1   VTPYNNYYV 27
           + PYNNYY+
Sbjct: 139 IEPYNNYYI 147


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,482
Number of Sequences: 438
Number of extensions: 2250
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)