Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0382.Seq
         (508 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014558-1|AAH14558.1|  627|Homo sapiens fem-1 homolog b (C. ele...    30   4.0  
BC010122-1|AAH10122.1|  627|Homo sapiens fem-1 homolog b (C. ele...    30   4.0  
AF204883-1|AAF69303.1|  627|Homo sapiens FEM1 beta protein.            30   4.0  
AF178632-1|AAF05314.1|  627|Homo sapiens FEM-1-like death recept...    30   4.0  
AB007856-1|BAA23692.2|  627|Homo sapiens KIAA0396 protein.             30   4.0  
AJ566387-1|CAD97467.1|  251|Homo sapiens keratin associated prot...    29   7.1  
AB076358-1|BAD01545.1|  251|Homo sapiens keratin associated prot...    29   7.1  

>BC014558-1|AAH14558.1|  627|Homo sapiens fem-1 homolog b (C.
           elegans) protein.
          Length = 627

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 264 DQPKINKQCSVTMHLNTQTRVRLSQGHLFMKSNADV 371
           DQ KINKQ    +HL+ +TR   +  HL + SN  V
Sbjct: 463 DQCKINKQIYNLIHLDPRTREGFTLLHLAVNSNTPV 498


>BC010122-1|AAH10122.1|  627|Homo sapiens fem-1 homolog b (C.
           elegans) protein.
          Length = 627

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 264 DQPKINKQCSVTMHLNTQTRVRLSQGHLFMKSNADV 371
           DQ KINKQ    +HL+ +TR   +  HL + SN  V
Sbjct: 463 DQCKINKQIYNLIHLDPRTREGFTLLHLAVNSNTPV 498


>AF204883-1|AAF69303.1|  627|Homo sapiens FEM1 beta protein.
          Length = 627

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 264 DQPKINKQCSVTMHLNTQTRVRLSQGHLFMKSNADV 371
           DQ KINKQ    +HL+ +TR   +  HL + SN  V
Sbjct: 463 DQCKINKQIYNLIHLDPRTREGFTLLHLAVNSNTPV 498


>AF178632-1|AAF05314.1|  627|Homo sapiens FEM-1-like death receptor
           binding protein protein.
          Length = 627

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 264 DQPKINKQCSVTMHLNTQTRVRLSQGHLFMKSNADV 371
           DQ KINKQ    +HL+ +TR   +  HL + SN  V
Sbjct: 463 DQCKINKQIYNLIHLDPRTREGFTLLHLAVNSNTPV 498


>AB007856-1|BAA23692.2|  627|Homo sapiens KIAA0396 protein.
          Length = 627

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 264 DQPKINKQCSVTMHLNTQTRVRLSQGHLFMKSNADV 371
           DQ KINKQ    +HL+ +TR   +  HL + SN  V
Sbjct: 463 DQCKINKQIYNLIHLDPRTREGFTLLHLAVNSNTPV 498


>AJ566387-1|CAD97467.1|  251|Homo sapiens keratin associated protein
           KAP10.10 protein.
          Length = 251

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -2

Query: 243 CY*ISNCE*LSCIAVLCVIVTCLPLN**FKPTVFVVLCTK 124
           C   S C+   C+ V CV V C+P+    KP  FV  C++
Sbjct: 84  CCTSSPCQQACCVPVCCVPVCCVPVC--NKPVCFVPTCSE 121


>AB076358-1|BAD01545.1|  251|Homo sapiens keratin associated protein
           protein.
          Length = 251

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -2

Query: 243 CY*ISNCE*LSCIAVLCVIVTCLPLN**FKPTVFVVLCTK 124
           C   S C+   C+ V CV V C+P+    KP  FV  C++
Sbjct: 84  CCTSSPCQQACCVPVCCVPVCCVPVC--NKPVCFVPTCSE 121


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,224,301
Number of Sequences: 237096
Number of extensions: 1190073
Number of successful extensions: 1477
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1477
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)