Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0379.Seq
         (597 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   3.2  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   5.7  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   7.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   7.5  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +1

Query: 79  YSCFCT*KCPKHTFCSKCES-SSNL 150
           Y+C C  +CPK   C   +S SSN+
Sbjct: 750 YACDCKMECPKQCTCYHDQSWSSNV 774


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 103 CPKHTFCSKCESSSNLR 153
           CP  T CS+C  ++N R
Sbjct: 36  CPGKTTCSQCIQTTNCR 52


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 63   LFTICILLFLYM 98
            LF IC+LLFL M
Sbjct: 1752 LFNICLLLFLVM 1763


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 73  YVYSCFCT*KCPKH 114
           Y Y   C  KCP+H
Sbjct: 255 YAYGATCVRKCPEH 268


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 520,057
Number of Sequences: 2352
Number of extensions: 9328
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)