Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0378.Seq
         (352 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2693|AAF49495.2|  199|Drosophila melanogaster CG13062-P...    29   1.3  
AE013599-1306|ABC66067.1|  161|Drosophila melanogaster CG34054-P...    28   2.9  
L05080-1|AAA28420.1|  873|Drosophila melanogaster calphotin prot...    27   5.1  
AY094820-1|AAM11173.1|  609|Drosophila melanogaster LD34893p pro...    27   5.1  
AE013599-2637|AAF57737.2|  609|Drosophila melanogaster CG10915-P...    27   5.1  
AY071028-1|AAL48650.1|  663|Drosophila melanogaster RE11035p pro...    27   6.7  
AE014134-629|AAF51091.1|  663|Drosophila melanogaster CG8852-PA ...    27   6.7  
DQ138716-1|ABA86322.1|  166|Drosophila melanogaster CG15696 prot...    27   8.9  
BT029150-1|ABJ17084.1|  179|Drosophila melanogaster RT01055p pro...    27   8.9  
BT004862-1|AAO45218.1|  359|Drosophila melanogaster RE24410p pro...    27   8.9  
AE014297-2876|AAF55814.1|  179|Drosophila melanogaster CG15696-P...    27   8.9  
AE014296-3293|AAF49056.2|  359|Drosophila melanogaster CG7017-PA...    27   8.9  

>AE014296-2693|AAF49495.2|  199|Drosophila melanogaster CG13062-PA
           protein.
          Length = 199

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +1

Query: 16  PEHLAVAALMDTVPTVVMEVYHPPAV----PVTLVQTQTAQDPVHL 141
           P H+    L+   PTVV  V HPP +    P  +++     DP HL
Sbjct: 145 PHHIIKPVLL---PTVVKTVVHPPIIKAYHPAPIIKAYHPYDPFHL 187



 Score = 29.1 bits (62), Expect = 1.7
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
 Frame = +1

Query: 76  YHPPAVPVTLVQTQTAQDPVHLVVAALMDTVPTVVMKVYHPPAV----PVTLIRIQTA*D 243
           YH PA       T     P H++   L+   PTVV  V HPP +    P  +I+     D
Sbjct: 127 YHLPAAVSHQSSTVVHSVPHHIIKPVLL---PTVVKTVVHPPIIKAYHPAPIIKAYHPYD 183

Query: 244 P 246
           P
Sbjct: 184 P 184


>AE013599-1306|ABC66067.1|  161|Drosophila melanogaster CG34054-PA
           protein.
          Length = 161

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = -2

Query: 237 RCLNSNQCYWNCRWMIHFHHDCWNCIHKCCYHQMYWILRCLSLNQ 103
           RC   NQ  +N  W +     C    ++CCY+    I  C  L+Q
Sbjct: 100 RCFLRNQMKYNTCWPVPPRATC----YRCCYYYDSHITECSKLHQ 140


>L05080-1|AAA28420.1|  873|Drosophila melanogaster calphotin
           protein.
          Length = 873

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
 Frame = +1

Query: 28  AVAALMDTVPTVVMEVYHPPAVPVTLVQTQTAQDPVHLV---VAALMDTVPTVVMKVYHP 198
           AV A     PT V  V  PP +      T T   P  +    VA +    P VV     P
Sbjct: 40  AVVAPAPAAPTAVTPVAPPPTLASVQPATVTVPAPAPIAAASVAPVASVAPPVVAAPTPP 99

Query: 199 PAVPVT 216
            A PV+
Sbjct: 100 AASPVS 105


>AY094820-1|AAM11173.1|  609|Drosophila melanogaster LD34893p
           protein.
          Length = 609

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +1

Query: 28  AVAALMDTVPTVVMEVYHPPA-VPVTLVQTQTAQDPVHLVVAALMDTVPTVVMKVYHPPA 204
           AVAA ++T  TV + +  PP+  P  +  T T Q       AAL            HP  
Sbjct: 486 AVAASVETAATVTVPMVAPPSPSPAKMQPTATIQRAPGGKYAALAAAAALDQTTTPHPHP 545

Query: 205 VPVTL 219
           VP+ +
Sbjct: 546 VPIAV 550


>AE013599-2637|AAF57737.2|  609|Drosophila melanogaster CG10915-PA
           protein.
          Length = 609

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +1

Query: 28  AVAALMDTVPTVVMEVYHPPA-VPVTLVQTQTAQDPVHLVVAALMDTVPTVVMKVYHPPA 204
           AVAA ++T  TV + +  PP+  P  +  T T Q       AAL            HP  
Sbjct: 486 AVAASVETAATVTVPMVAPPSPSPAKMQPTATIQRAPGGKYAALAAAAALDQTTTPHPHP 545

Query: 205 VPVTL 219
           VP+ +
Sbjct: 546 VPIAV 550


>AY071028-1|AAL48650.1|  663|Drosophila melanogaster RE11035p
           protein.
          Length = 663

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 117 LSLNQCYWNCRWMIHFHH 64
           +S++   W+C+WM++F H
Sbjct: 394 ISIDDNPWSCQWMLNFSH 411


>AE014134-629|AAF51091.1|  663|Drosophila melanogaster CG8852-PA
           protein.
          Length = 663

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 117 LSLNQCYWNCRWMIHFHH 64
           +S++   W+C+WM++F H
Sbjct: 394 ISIDDNPWSCQWMLNFSH 411


>DQ138716-1|ABA86322.1|  166|Drosophila melanogaster CG15696
           protein.
          Length = 166

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = +1

Query: 76  YHPPAVPVTLVQTQTAQDPVHLVVAALMDTVPTVVMKVYHPPAVPVTL 219
           +HP A P + V  ++   P      A +     +    YHPP +P  L
Sbjct: 29  FHPYAHPASYVSKESGGSPPASAAEAQIPVYDWLQYTRYHPPKLPRAL 76


>BT029150-1|ABJ17084.1|  179|Drosophila melanogaster RT01055p
           protein.
          Length = 179

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = +1

Query: 76  YHPPAVPVTLVQTQTAQDPVHLVVAALMDTVPTVVMKVYHPPAVPVTL 219
           +HP A P + V  ++   P      A +     +    YHPP +P  L
Sbjct: 36  FHPYAHPASYVSKESGGSPPASAAEAQIPVYDWLQYTRYHPPKLPRAL 83


>BT004862-1|AAO45218.1|  359|Drosophila melanogaster RE24410p
           protein.
          Length = 359

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 347 CLSXNQCYXNCRWSIHFHHDSWNCLHESCYR 255
           C S  Q   NC   + FH  S +C++E  YR
Sbjct: 126 CKSHKQIKANCPNELIFHPVSRSCVYEKQYR 156


>AE014297-2876|AAF55814.1|  179|Drosophila melanogaster CG15696-PA
           protein.
          Length = 179

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = +1

Query: 76  YHPPAVPVTLVQTQTAQDPVHLVVAALMDTVPTVVMKVYHPPAVPVTL 219
           +HP A P + V  ++   P      A +     +    YHPP +P  L
Sbjct: 36  FHPYAHPASYVSKESGGSPPASAAEAQIPVYDWLQYTRYHPPKLPRAL 83


>AE014296-3293|AAF49056.2|  359|Drosophila melanogaster CG7017-PA
           protein.
          Length = 359

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 347 CLSXNQCYXNCRWSIHFHHDSWNCLHESCYR 255
           C S  Q   NC   + FH  S +C++E  YR
Sbjct: 126 CKSHKQIKANCPNELIFHPVSRSCVYEKQYR 156


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,475,605
Number of Sequences: 53049
Number of extensions: 251192
Number of successful extensions: 805
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)