Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0378.Seq
(352 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 27 0.049
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 27 0.049
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 22 2.4
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 22 2.4
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 22 2.4
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 22 2.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 3.2
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 20 7.4
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 20 7.4
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 20 7.4
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 27.5 bits (58), Expect = 0.049
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -2
Query: 174 CWNCIHKCCYHQMYWILRCLS-LNQCYW 94
C NCIH + ++W+ C S +N C +
Sbjct: 35 CRNCIHPTVFSVLFWLGYCNSAINPCIY 62
Score = 25.8 bits (54), Expect = 0.15
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 60 CWNCIHKCCYRQMFWILRC 4
C NCIH + +FW+ C
Sbjct: 35 CRNCIHPTVFSVLFWLGYC 53
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 27.5 bits (58), Expect = 0.049
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -2
Query: 174 CWNCIHKCCYHQMYWILRCLS-LNQCYW 94
C NCIH + ++W+ C S +N C +
Sbjct: 483 CRNCIHPTVFSVLFWLGYCNSAINPCIY 510
Score = 25.8 bits (54), Expect = 0.15
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 60 CWNCIHKCCYRQMFWILRC 4
C NCIH + +FW+ C
Sbjct: 483 CRNCIHPTVFSVLFWLGYC 501
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 21.8 bits (44), Expect = 2.4
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -3
Query: 275 LHESCYRGFPGSYAV*IRISVTGTAGG*YTFITTVGTVSISAATT 141
++E+ Y Y+ IR+ V T +TTV + + S TT
Sbjct: 93 INETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSEADSDVTT 137
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 21.8 bits (44), Expect = 2.4
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -3
Query: 275 LHESCYRGFPGSYAV*IRISVTGTAGG*YTFITTVGTVSISAATT 141
++E+ Y Y+ IR+ V T +TTV + + S TT
Sbjct: 141 INETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSEADSDVTT 185
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 21.8 bits (44), Expect = 2.4
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -3
Query: 275 LHESCYRGFPGSYAV*IRISVTGTAGG*YTFITTVGTVSISAATT 141
++E+ Y Y+ IR+ V T +TTV + + S TT
Sbjct: 141 INETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSEADSDVTT 185
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 21.8 bits (44), Expect = 2.4
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -3
Query: 275 LHESCYRGFPGSYAV*IRISVTGTAGG*YTFITTVGTVSISAATT 141
++E+ Y Y+ IR+ V T +TTV + + S TT
Sbjct: 141 INETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSEADSDVTT 185
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 3.2
Identities = 11/38 (28%), Positives = 13/38 (34%)
Frame = -2
Query: 204 CRWMIHFHHDCWNCIHKCCYHQMYWILRCLSLNQCYWN 91
CR+ H C C C +M C N WN
Sbjct: 737 CRYEAHCFALCHCCDFDACDCEMTCPAGCKCYNDRTWN 774
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 20.2 bits (40), Expect = 7.4
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -2
Query: 150 CYHQMYWIL 124
C++ MYWI+
Sbjct: 418 CFNLMYWII 426
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 20.2 bits (40), Expect = 7.4
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -2
Query: 150 CYHQMYWIL 124
C++ MYWI+
Sbjct: 418 CFNLMYWII 426
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 20.2 bits (40), Expect = 7.4
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -2
Query: 150 CYHQMYWIL 124
C++ MYWI+
Sbjct: 356 CFNLMYWII 364
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,258
Number of Sequences: 438
Number of extensions: 1341
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8060325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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