Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0375.Seq
         (536 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06994-1|CAA30052.1|  325|Homo sapiens protein ( Human mRNA for ...    50   5e-06
M16597-1|AAA35730.1|  227|Homo sapiens protein ( Human cytochrom...    50   5e-06
J04444-1|AAA52135.1|  325|Homo sapiens protein ( Human cytochrom...    50   5e-06
DQ300360-1|ABB96244.1|  325|Homo sapiens cytochrome c-1 protein.       50   5e-06
CR541674-1|CAG46475.1|  325|Homo sapiens CYC1 protein.                 50   5e-06
BT019798-1|AAV38601.1|  325|Homo sapiens cytochrome c-1 protein.       50   5e-06
BC024650-1|AAH24650.1|  315|Homo sapiens Unknown (protein for IM...    50   5e-06
BC020566-1|AAH20566.1|  325|Homo sapiens cytochrome c-1 protein.       50   5e-06
BC015616-1|AAH15616.1|  325|Homo sapiens cytochrome c-1 protein.       50   5e-06
BC001006-1|AAH01006.1|  325|Homo sapiens cytochrome c-1 protein.       50   5e-06

>X06994-1|CAA30052.1|  325|Homo sapiens protein ( Human mRNA for
           cytochrome c1. ).
          Length = 325

 Score = 50.0 bits (114), Expect = 5e-06
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 471 QMTIKAIGMFSMLAAVVYYYKRHKWSTLKSRKLAYKP 361
           +M +K + M ++L  +VY  KRHKWS LKSRKLAY+P
Sbjct: 287 RMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKLAYRP 323


>M16597-1|AAA35730.1|  227|Homo sapiens protein ( Human cytochrome
           c1 mRNA, partial cds. ).
          Length = 227

 Score = 50.0 bits (114), Expect = 5e-06
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 471 QMTIKAIGMFSMLAAVVYYYKRHKWSTLKSRKLAYKP 361
           +M +K + M ++L  +VY  KRHKWS LKSRKLAY+P
Sbjct: 189 RMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKLAYRP 225


>J04444-1|AAA52135.1|  325|Homo sapiens protein ( Human cytochrome
           c-1 gene, complete cds. ).
          Length = 325

 Score = 50.0 bits (114), Expect = 5e-06
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 471 QMTIKAIGMFSMLAAVVYYYKRHKWSTLKSRKLAYKP 361
           +M +K + M ++L  +VY  KRHKWS LKSRKLAY+P
Sbjct: 287 RMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKLAYRP 323


>DQ300360-1|ABB96244.1|  325|Homo sapiens cytochrome c-1 protein.
          Length = 325

 Score = 50.0 bits (114), Expect = 5e-06
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 471 QMTIKAIGMFSMLAAVVYYYKRHKWSTLKSRKLAYKP 361
           +M +K + M ++L  +VY  KRHKWS LKSRKLAY+P
Sbjct: 287 RMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKLAYRP 323


>CR541674-1|CAG46475.1|  325|Homo sapiens CYC1 protein.
          Length = 325

 Score = 50.0 bits (114), Expect = 5e-06
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 471 QMTIKAIGMFSMLAAVVYYYKRHKWSTLKSRKLAYKP 361
           +M +K + M ++L  +VY  KRHKWS LKSRKLAY+P
Sbjct: 287 RMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKLAYRP 323


>BT019798-1|AAV38601.1|  325|Homo sapiens cytochrome c-1 protein.
          Length = 325

 Score = 50.0 bits (114), Expect = 5e-06
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 471 QMTIKAIGMFSMLAAVVYYYKRHKWSTLKSRKLAYKP 361
           +M +K + M ++L  +VY  KRHKWS LKSRKLAY+P
Sbjct: 287 RMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKLAYRP 323


>BC024650-1|AAH24650.1|  315|Homo sapiens Unknown (protein for
           IMAGE:4470223) protein.
          Length = 315

 Score = 50.0 bits (114), Expect = 5e-06
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 471 QMTIKAIGMFSMLAAVVYYYKRHKWSTLKSRKLAYKP 361
           +M +K + M ++L  +VY  KRHKWS LKSRKLAY+P
Sbjct: 277 RMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKLAYRP 313


>BC020566-1|AAH20566.1|  325|Homo sapiens cytochrome c-1 protein.
          Length = 325

 Score = 50.0 bits (114), Expect = 5e-06
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 471 QMTIKAIGMFSMLAAVVYYYKRHKWSTLKSRKLAYKP 361
           +M +K + M ++L  +VY  KRHKWS LKSRKLAY+P
Sbjct: 287 RMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKLAYRP 323


>BC015616-1|AAH15616.1|  325|Homo sapiens cytochrome c-1 protein.
          Length = 325

 Score = 50.0 bits (114), Expect = 5e-06
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 471 QMTIKAIGMFSMLAAVVYYYKRHKWSTLKSRKLAYKP 361
           +M +K + M ++L  +VY  KRHKWS LKSRKLAY+P
Sbjct: 287 RMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKLAYRP 323


>BC001006-1|AAH01006.1|  325|Homo sapiens cytochrome c-1 protein.
          Length = 325

 Score = 50.0 bits (114), Expect = 5e-06
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 471 QMTIKAIGMFSMLAAVVYYYKRHKWSTLKSRKLAYKP 361
           +M +K + M ++L  +VY  KRHKWS LKSRKLAY+P
Sbjct: 287 RMGLKMLMMMALLVPLVYTIKRHKWSVLKSRKLAYRP 323


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,065,806
Number of Sequences: 237096
Number of extensions: 1363910
Number of successful extensions: 2123
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2113
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)