Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0372.Seq
         (449 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   125   3e-29
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   125   3e-29
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   125   3e-29
AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   125   3e-29
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   125   3e-29
AE014134-1970|AAF53017.1|  874|Drosophila melanogaster CG6700-PA...    29   3.8  

>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  125 bits (301), Expect = 3e-29
 Identities = 53/72 (73%), Positives = 63/72 (87%)
 Frame = -3

Query: 258 EAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHG 79
           +AQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ +E+LR++ RL  DGC V+YRPEHG
Sbjct: 145 KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHG 204

Query: 78  PLDAWRKVQAEI 43
           P+ AW K Q ++
Sbjct: 205 PIAAWEKAQRDV 216



 Score =  101 bits (241), Expect = 6e-22
 Identities = 48/50 (96%), Positives = 49/50 (98%)
 Frame = -1

Query: 404 VIRINKMLSCAGADRLQTGMRGAFGKPQGXVARVRIGQPIMSVRSSDRWK 255
           VIRINKMLSCAGADRLQTGMRGAFGKPQG VARVRIGQPIMSVRSSDR+K
Sbjct: 96  VIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYK 145



 Score = 35.5 bits (78), Expect = 0.033
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -3

Query: 447 KDQFHIRIRLHPFH 406
           KDQFHIR+RLHPFH
Sbjct: 82  KDQFHIRMRLHPFH 95


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  125 bits (301), Expect = 3e-29
 Identities = 53/72 (73%), Positives = 63/72 (87%)
 Frame = -3

Query: 258 EAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHG 79
           +AQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ +E+LR++ RL  DGC V+YRPEHG
Sbjct: 124 KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHG 183

Query: 78  PLDAWRKVQAEI 43
           P+ AW K Q ++
Sbjct: 184 PIAAWEKAQRDV 195



 Score = 94.3 bits (224), Expect = 7e-20
 Identities = 44/46 (95%), Positives = 45/46 (97%)
 Frame = -1

Query: 392 NKMLSCAGADRLQTGMRGAFGKPQGXVARVRIGQPIMSVRSSDRWK 255
           NKMLSCAGADRLQTGMRGAFGKPQG VARVRIGQPIMSVRSSDR+K
Sbjct: 79  NKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYK 124


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  125 bits (301), Expect = 3e-29
 Identities = 53/72 (73%), Positives = 63/72 (87%)
 Frame = -3

Query: 258 EAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHG 79
           +AQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ +E+LR++ RL  DGC V+YRPEHG
Sbjct: 145 KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHG 204

Query: 78  PLDAWRKVQAEI 43
           P+ AW K Q ++
Sbjct: 205 PIAAWEKAQRDV 216



 Score =  101 bits (241), Expect = 6e-22
 Identities = 48/50 (96%), Positives = 49/50 (98%)
 Frame = -1

Query: 404 VIRINKMLSCAGADRLQTGMRGAFGKPQGXVARVRIGQPIMSVRSSDRWK 255
           VIRINKMLSCAGADRLQTGMRGAFGKPQG VARVRIGQPIMSVRSSDR+K
Sbjct: 96  VIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYK 145



 Score = 35.5 bits (78), Expect = 0.033
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -3

Query: 447 KDQFHIRIRLHPFH 406
           KDQFHIR+RLHPFH
Sbjct: 82  KDQFHIRMRLHPFH 95


>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  125 bits (301), Expect = 3e-29
 Identities = 53/72 (73%), Positives = 63/72 (87%)
 Frame = -3

Query: 258 EAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHG 79
           +AQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ +E+LR++ RL  DGC V+YRPEHG
Sbjct: 158 KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHG 217

Query: 78  PLDAWRKVQAEI 43
           P+ AW K Q ++
Sbjct: 218 PIAAWEKAQRDV 229



 Score =  101 bits (241), Expect = 6e-22
 Identities = 48/50 (96%), Positives = 49/50 (98%)
 Frame = -1

Query: 404 VIRINKMLSCAGADRLQTGMRGAFGKPQGXVARVRIGQPIMSVRSSDRWK 255
           VIRINKMLSCAGADRLQTGMRGAFGKPQG VARVRIGQPIMSVRSSDR+K
Sbjct: 109 VIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYK 158



 Score = 35.5 bits (78), Expect = 0.033
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -3

Query: 447 KDQFHIRIRLHPFH 406
           KDQFHIR+RLHPFH
Sbjct: 95  KDQFHIRMRLHPFH 108


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  125 bits (301), Expect = 3e-29
 Identities = 53/72 (73%), Positives = 63/72 (87%)
 Frame = -3

Query: 258 EAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHG 79
           +AQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ +E+LR++ RL  DGC V+YRPEHG
Sbjct: 164 KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHG 223

Query: 78  PLDAWRKVQAEI 43
           P+ AW K Q ++
Sbjct: 224 PIAAWEKAQRDV 235



 Score =  101 bits (241), Expect = 6e-22
 Identities = 48/50 (96%), Positives = 49/50 (98%)
 Frame = -1

Query: 404 VIRINKMLSCAGADRLQTGMRGAFGKPQGXVARVRIGQPIMSVRSSDRWK 255
           VIRINKMLSCAGADRLQTGMRGAFGKPQG VARVRIGQPIMSVRSSDR+K
Sbjct: 115 VIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYK 164



 Score = 35.5 bits (78), Expect = 0.033
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -3

Query: 447 KDQFHIRIRLHPFH 406
           KDQFHIR+RLHPFH
Sbjct: 101 KDQFHIRMRLHPFH 114


>AE014134-1970|AAF53017.1|  874|Drosophila melanogaster CG6700-PA
           protein.
          Length = 874

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -1

Query: 275 RSSDRWKHRSSRLCAVPSSSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASLM 114
           RS  R +   SR C+  S +S    R   ++SG ++S+N + L + + R    M
Sbjct: 463 RSRSRSRSPRSRSCSRSSDASSPPARKIIRKSGSNESLNFIPLTANLSRKQQKM 516


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,909,995
Number of Sequences: 53049
Number of extensions: 458048
Number of successful extensions: 1209
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)