Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0371.Seq
         (618 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5BVT5 Cluster: SJCHGC07766 protein; n=1; Schistosoma j...    34   3.1  
UniRef50_UPI00015B454A Cluster: PREDICTED: similar to conserved ...    33   5.5  
UniRef50_UPI00006CB1B4 Cluster: SET domain containing protein; n...    33   5.5  
UniRef50_A3ZYQ2 Cluster: Putative uncharacterized protein; n=1; ...    33   5.5  

>UniRef50_Q5BVT5 Cluster: SJCHGC07766 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC07766 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 155

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +1

Query: 217 FLYFPSQVSFLLLIFC*CIVPMLALHFFSSILFPLGCKSVKNIICDLQQCA-CFIQNFIC 393
           FLY+ S V F+LL +C     +L L++ S++  P+      N++  L  C+  FI  F C
Sbjct: 38  FLYYCSTV-FILLFYCFYTTVLLFLYYCSTVFIPMFYCFYTNVLLFLYYCSTVFILLFYC 96


>UniRef50_UPI00015B454A Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 229

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 325 CKSVKNIICDLQQCACFIQNFICNPYHLQPY*SCFLCC 438
           C  + +  CDL  C+C    F+C  +    Y SCF  C
Sbjct: 64  CMLLNSCKCDLSTCSCCKDCFLCLSFLFDEYCSCFNLC 101


>UniRef50_UPI00006CB1B4 Cluster: SET domain containing protein; n=1;
           Tetrahymena thermophila SB210|Rep: SET domain containing
           protein - Tetrahymena thermophila SB210
          Length = 869

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 322 GCKSVKNIICDLQQCACFIQNFICNPYH 405
           GCK +K   C  ++CACF+    C+P H
Sbjct: 566 GCKCIKGQ-CKTKKCACFLMGMECDPEH 592


>UniRef50_A3ZYQ2 Cluster: Putative uncharacterized protein; n=1;
           Blastopirellula marina DSM 3645|Rep: Putative
           uncharacterized protein - Blastopirellula marina DSM
           3645
          Length = 389

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = -2

Query: 614 TLWPAKKTFPI-IXHQNATXNKLKEQAWQTLVNDFNCLFVV 495
           TL  A++T P  I + N+  N+L+ + W+   N F+CLF V
Sbjct: 277 TLDAAQRTPPFDISYINSQINRLRTEPWRRWANGFSCLFFV 317


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,759,361
Number of Sequences: 1657284
Number of extensions: 8659628
Number of successful extensions: 18057
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18051
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)