Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0371.Seq
         (618 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065962-1|BAC06174.1|  326|Homo sapiens seven transmembrane hel...    30   5.7  
BC014526-1|AAH14526.1|  492|Homo sapiens ANKH protein protein.         29   9.9  
BC009835-1|AAH09835.1|  492|Homo sapiens ankylosis, progressive ...    29   9.9  
AY358503-1|AAQ88867.1|  492|Homo sapiens ANKH protein.                 29   9.9  
AK222631-1|BAD96351.1|  487|Homo sapiens ankylosis, progressive ...    29   9.9  
AF274753-1|AAF88039.1|  492|Homo sapiens progressive ankylosis-l...    29   9.9  
AB046801-1|BAB13407.1|  545|Homo sapiens KIAA1581 protein protein.     29   9.9  

>AB065962-1|BAC06174.1|  326|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 326

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +1

Query: 211 SPFLYFPSQVSFLLLIFC*CIVPMLALHFFS---SILFPLGCKSVKNIICDLQQCACFI 378
           SP  YF   +SFL + +   + P + ++F +   SI F LGC +   + C      CF+
Sbjct: 69  SPMYYFLGVLSFLDVCYSTVVTPKMLVNFLAKNKSISF-LGCATQMFLACTFGTTECFL 126


>BC014526-1|AAH14526.1|  492|Homo sapiens ANKH protein protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 469 SKLRWSSWETTNRQLKSFTRVCQACSFNLLXVAFW 573
           +KL  +S   T   +K FT VC A S  L  V FW
Sbjct: 310 NKLVSTSNTVTAAHIKKFTFVCMALSLTLCFVMFW 344


>BC009835-1|AAH09835.1|  492|Homo sapiens ankylosis, progressive
           homolog (mouse) protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 469 SKLRWSSWETTNRQLKSFTRVCQACSFNLLXVAFW 573
           +KL  +S   T   +K FT VC A S  L  V FW
Sbjct: 310 NKLVSTSNTVTAAHIKKFTFVCMALSLTLCFVMFW 344


>AY358503-1|AAQ88867.1|  492|Homo sapiens ANKH protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 469 SKLRWSSWETTNRQLKSFTRVCQACSFNLLXVAFW 573
           +KL  +S   T   +K FT VC A S  L  V FW
Sbjct: 310 NKLVSTSNTVTAAHIKKFTFVCMALSLTLCFVMFW 344


>AK222631-1|BAD96351.1|  487|Homo sapiens ankylosis, progressive
           homolog protein.
          Length = 487

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 469 SKLRWSSWETTNRQLKSFTRVCQACSFNLLXVAFW 573
           +KL  +S   T   +K FT VC A S  L  V FW
Sbjct: 310 NKLVSTSNTVTAAHIKKFTFVCMALSLTLCFVMFW 344


>AF274753-1|AAF88039.1|  492|Homo sapiens progressive ankylosis-like
           protein protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 469 SKLRWSSWETTNRQLKSFTRVCQACSFNLLXVAFW 573
           +KL  +S   T   +K FT VC A S  L  V FW
Sbjct: 310 NKLVSTSNTVTAAHIKKFTFVCMALSLTLCFVMFW 344


>AB046801-1|BAB13407.1|  545|Homo sapiens KIAA1581 protein protein.
          Length = 545

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 469 SKLRWSSWETTNRQLKSFTRVCQACSFNLLXVAFW 573
           +KL  +S   T   +K FT VC A S  L  V FW
Sbjct: 363 NKLVSTSNTVTAAHIKKFTFVCMALSLTLCFVMFW 397


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,642,954
Number of Sequences: 237096
Number of extensions: 1317460
Number of successful extensions: 2189
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2189
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)