Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0371.Seq
         (618 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023683-1|AAY85083.1|  205|Drosophila melanogaster IP04215p pro...    28   8.8  
AY089306-1|AAL90044.1|  279|Drosophila melanogaster AT10995p pro...    28   8.8  
AE014298-520|AAN09093.1|  205|Drosophila melanogaster CG12535-PB...    28   8.8  
AE014297-2074|AAF55218.2|  279|Drosophila melanogaster CG5623-PA...    28   8.8  

>BT023683-1|AAY85083.1|  205|Drosophila melanogaster IP04215p
           protein.
          Length = 205

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +1

Query: 481 WSSWETTN-RQLKSFTRVCQACSFNLLXVAFWXLIIGNVF 597
           W+    TN  QLK   + C  C      + FW +++ +VF
Sbjct: 31  WTFCPMTNWNQLKPVLQSCNLCRVESFPIVFWLVVLLSVF 70


>AY089306-1|AAL90044.1|  279|Drosophila melanogaster AT10995p
           protein.
          Length = 279

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 307 ILFPLGCKSVKNIICDLQQCACFIQNFICNPYHLQ 411
           I+FP     ++   C   QC C+  +  C   HLQ
Sbjct: 244 IVFPYSTSILRQCCCPTGQCRCYATHTACCEDHLQ 278


>AE014298-520|AAN09093.1|  205|Drosophila melanogaster CG12535-PB,
           isoform B protein.
          Length = 205

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +1

Query: 481 WSSWETTN-RQLKSFTRVCQACSFNLLXVAFWXLIIGNVF 597
           W+    TN  QLK   + C  C      + FW +++ +VF
Sbjct: 31  WTFCPMTNWNQLKPVLQSCNLCRVESFPIVFWLVVLLSVF 70


>AE014297-2074|AAF55218.2|  279|Drosophila melanogaster CG5623-PA
           protein.
          Length = 279

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 307 ILFPLGCKSVKNIICDLQQCACFIQNFICNPYHLQ 411
           I+FP     ++   C   QC C+  +  C   HLQ
Sbjct: 244 IVFPYSTSILRQCCCPTGQCRCYATHTACCEDHLQ 278


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,856,853
Number of Sequences: 53049
Number of extensions: 396254
Number of successful extensions: 777
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)