Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0370.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   6.2  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   6.2  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   6.2  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   6.2  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 12/41 (29%), Positives = 15/41 (36%)
 Frame = -3

Query: 425 GTPGEXXLCRDGQXVY*HYPXHXMRWCHHQAAGXVAQLALP 303
           GTP    L  DG  V  HY     R   H+       + +P
Sbjct: 188 GTPDSITLFGDGTSVNFHYLSPQSRGLFHRGWSMSGTMLVP 228


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 12/41 (29%), Positives = 15/41 (36%)
 Frame = -3

Query: 425 GTPGEXXLCRDGQXVY*HYPXHXMRWCHHQAAGXVAQLALP 303
           GTP    L  DG  V  HY     R   H+       + +P
Sbjct: 188 GTPDSITLFGDGTSVNFHYLSPQSRGLFHRGWSMSGTMLVP 228


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 12/41 (29%), Positives = 15/41 (36%)
 Frame = -3

Query: 425 GTPGEXXLCRDGQXVY*HYPXHXMRWCHHQAAGXVAQLALP 303
           GTP    L  DG  V  HY     R   H+       + +P
Sbjct: 188 GTPDSITLFGDGTSVNFHYLSPQSRGLFHRGWSMSGTMLVP 228


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 12/41 (29%), Positives = 15/41 (36%)
 Frame = -3

Query: 425 GTPGEXXLCRDGQXVY*HYPXHXMRWCHHQAAGXVAQLALP 303
           GTP    L  DG  V  HY     R   H+       + +P
Sbjct: 188 GTPDSITLFGDGTSVNFHYLSPQSRGLFHRGWSMSGTMLVP 228


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,538
Number of Sequences: 336
Number of extensions: 1719
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)