Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0370.Seq
         (499 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008430-1|AAH08430.1|  205|Homo sapiens family with sequence si...    40   0.004
AF223467-1|AAF64142.1|  205|Homo sapiens NPD008 protein protein.       37   0.034
AF151906-1|AAD34143.1|  181|Homo sapiens CGI-148 protein protein.      37   0.034
BC011952-1|AAH11952.1|  276|Homo sapiens family with sequence si...    33   0.42 
AB074181-1|BAE45741.1|  164|Homo sapiens putative protein produc...    33   0.42 

>BC008430-1|AAH08430.1|  205|Homo sapiens family with sequence
           similarity 18, member B protein.
          Length = 205

 Score = 40.3 bits (90), Expect = 0.004
 Identities = 19/30 (63%), Positives = 19/30 (63%)
 Frame = +2

Query: 392 HPYIVXFHLVXRCSAIIVYXLCGWLXDSFI 481
           HP    FHL  R SAIIVY LCG L  SFI
Sbjct: 33  HPVASFFHLFFRVSAIIVYLLCGLLSSSFI 62


>AF223467-1|AAF64142.1|  205|Homo sapiens NPD008 protein protein.
          Length = 205

 Score = 37.1 bits (82), Expect = 0.034
 Identities = 18/30 (60%), Positives = 18/30 (60%)
 Frame = +2

Query: 392 HPYIVXFHLVXRCSAIIVYXLCGWLXDSFI 481
           HP    FHL  R SAIIVY LC  L  SFI
Sbjct: 33  HPVASFFHLFFRVSAIIVYLLCELLSSSFI 62


>AF151906-1|AAD34143.1|  181|Homo sapiens CGI-148 protein protein.
          Length = 181

 Score = 37.1 bits (82), Expect = 0.034
 Identities = 18/30 (60%), Positives = 18/30 (60%)
 Frame = +2

Query: 392 HPYIVXFHLVXRCSAIIVYXLCGWLXDSFI 481
           HP    FHL  R SAIIVY LC  L  SFI
Sbjct: 33  HPVASFFHLFFRVSAIIVYLLCELLSSSFI 62


>BC011952-1|AAH11952.1|  276|Homo sapiens family with sequence
           similarity 18, member B2 protein.
          Length = 276

 Score = 33.5 bits (73), Expect = 0.42
 Identities = 17/30 (56%), Positives = 17/30 (56%)
 Frame = +2

Query: 392 HPYIVXFHLVXRCSAIIVYXLCGWLXDSFI 481
           HP    FHL  R SAIIV  LC  L  SFI
Sbjct: 33  HPVASFFHLFFRVSAIIVCLLCELLSSSFI 62


>AB074181-1|BAE45741.1|  164|Homo sapiens putative protein product
           of Nbla10383 protein.
          Length = 164

 Score = 33.5 bits (73), Expect = 0.42
 Identities = 17/30 (56%), Positives = 17/30 (56%)
 Frame = +2

Query: 392 HPYIVXFHLVXRCSAIIVYXLCGWLXDSFI 481
           HP    FHL  R SAIIV  LC  L  SFI
Sbjct: 33  HPVASFFHLFFRVSAIIVCLLCELLSSSFI 62


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,107,694
Number of Sequences: 237096
Number of extensions: 885832
Number of successful extensions: 880
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)