Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0367.Seq
(299 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 32 0.067
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.067
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 29 0.82
U28409-4|AAC46590.2| 394|Caenorhabditis elegans Saposin-like pr... 27 1.9
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 27 1.9
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 27 2.5
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 27 2.5
U00066-7|AAY86272.1| 80|Caenorhabditis elegans Hypothetical pr... 27 2.5
AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical... 27 2.5
Z79758-8|CAI79179.1| 695|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z79758-7|CAD98730.1| 763|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z79758-6|CAD98729.1| 673|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z79758-5|CAB54321.1| 687|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z79758-4|CAB02133.2| 790|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z79758-3|CAB02134.1| 689|Caenorhabditis elegans Hypothetical pr... 27 3.3
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z78417-9|CAI70407.1| 700|Caenorhabditis elegans Hypothetical pr... 26 4.4
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 32.3 bits (70), Expect = 0.067
Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 TAPTVVMEVYHPPAVPVTLIQTQTAKD-PEHLAVAALMDTVPTVVMEVYHPPAVPVTLIQ 190
TAP V PP +L+ T T P V TVPT P VT+
Sbjct: 553 TAPPVTTPTSQPPVTTTSLLTTLTTPTVPVTTTVVPSSATVPTT-------PPTTVTVAA 605
Query: 191 TQTAQDPVHLAVAALMDTVPT 253
T T++ PV L T PT
Sbjct: 606 TTTSKAPVVTTSPTLAPTSPT 626
Score = 26.6 bits (56), Expect = 3.3
Identities = 21/80 (26%), Positives = 25/80 (31%)
Frame = +2
Query: 14 TAPTVVMEVYHPPAVPVTLIQTQTAKDPEHLAVAALMDTVPTVVMEVYHPPAVPVTLIQT 193
T+PT V P V T T T+ T PT + P T T
Sbjct: 670 TSPTTAPTV---PPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVT 726
Query: 194 QTAQDPVHLAVAALMDTVPT 253
Q A P T+PT
Sbjct: 727 QPASQPATQPATTPTTTIPT 746
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 32.3 bits (70), Expect = 0.067
Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 TAPTVVMEVYHPPAVPVTLIQTQTAKD-PEHLAVAALMDTVPTVVMEVYHPPAVPVTLIQ 190
TAP V PP +L+ T T P V TVPT P VT+
Sbjct: 609 TAPPVTTPTSQPPVTTTSLLTTLTTPTVPVTTTVVPSSATVPTT-------PPTTVTVAA 661
Query: 191 TQTAQDPVHLAVAALMDTVPT 253
T T++ PV L T PT
Sbjct: 662 TTTSKAPVVTTSPTLAPTSPT 682
Score = 26.6 bits (56), Expect = 3.3
Identities = 21/80 (26%), Positives = 25/80 (31%)
Frame = +2
Query: 14 TAPTVVMEVYHPPAVPVTLIQTQTAKDPEHLAVAALMDTVPTVVMEVYHPPAVPVTLIQT 193
T+PT V P V T T T+ T PT + P T T
Sbjct: 726 TSPTTAPTV---PPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVT 782
Query: 194 QTAQDPVHLAVAALMDTVPT 253
Q A P T+PT
Sbjct: 783 QPASQPATQPATTPTTTIPT 802
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 28.7 bits (61), Expect = 0.82
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +2
Query: 23 TVVMEVYHPPAVPVTLIQTQTAKDPEHLAVAALMDTVPTVVMEVYHPPAVPVTLIQTQTA 202
T V +V PP PV ++ T+++P VA +M PP PV + TA
Sbjct: 483 TTVAQVM-PPNPPVVIVDPATSEEPNDTTVAQVM------------PPNPPVVISGPATA 529
Query: 203 QDPVHLAVAALMDTVP 250
+DP ++ T P
Sbjct: 530 KDPSTTTSDPVVQTNP 545
Score = 28.7 bits (61), Expect = 0.82
Identities = 23/78 (29%), Positives = 33/78 (42%)
Frame = +2
Query: 23 TVVMEVYHPPAVPVTLIQTQTAKDPEHLAVAALMDTVPTVVMEVYHPPAVPVTLIQTQTA 202
T V +V PP PV + TAKDP ++ T P PV ++ T+
Sbjct: 509 TTVAQVM-PPNPPVVISGPATAKDPSTTTSDPVVQTNP------------PVVIVDPATS 555
Query: 203 QDPVHLAVAALMDTVPTA 256
++P+ A AL D A
Sbjct: 556 EEPLSTASTALPDETTDA 573
>U28409-4|AAC46590.2| 394|Caenorhabditis elegans Saposin-like
protein family protein11 protein.
Length = 394
Score = 27.5 bits (58), Expect = 1.9
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +2
Query: 20 PTVVMEVYHPPAVPVTLIQTQTAKD-PEHLAVAALMDTVPTVVMEVYHPPAVPVTLIQTQ 196
P + V P +P+TL + + P L + DT+P + P VP+T +
Sbjct: 196 PLTLPTVKIPDIIPITLPTIKIPEIVPTKLPTVEVPDTIPKTLPTTKIPDIVPIT---SP 252
Query: 197 TAQDPVHLAVAALMDTVP 250
T + P + + D +P
Sbjct: 253 TVKIPQIIPTIKIPDIIP 270
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 27.5 bits (58), Expect = 1.9
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 17 APTVVMEVYHPPAVPVTLIQTQTAKDPEHLAVAALMDTVPTVVME 151
+PTV E Y P + Q K+P HL + +P V +E
Sbjct: 1433 SPTVPSEGYEIPIERRVTVPVQKPKEPAHLTENTPVPRIPGVTVE 1477
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
protein C46C2.1b protein.
Length = 1677
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +2
Query: 50 PAVPVTLIQTQTAKDPEH------LAVAALMDTVPTVVMEVYHPPAVPVTLIQTQTA 202
P+VPVT+I A P L+ + VPT ++ V P +PV + T A
Sbjct: 788 PSVPVTMIANIPAMSPTSAQPQPVLSPTSAAVPVPTTMIHVPKPSEIPVQNVATTAA 844
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
protein C46C2.1a protein.
Length = 1838
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +2
Query: 50 PAVPVTLIQTQTAKDPEH------LAVAALMDTVPTVVMEVYHPPAVPVTLIQTQTA 202
P+VPVT+I A P L+ + VPT ++ V P +PV + T A
Sbjct: 788 PSVPVTMIANIPAMSPTSAQPQPVLSPTSAAVPVPTTMIHVPKPSEIPVQNVATTAA 844
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 27.1 bits (57), Expect = 2.5
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +2
Query: 110 VAALMDTVPTVVMEVYHPPAVPVTLIQTQTAQDPVHLAVAALMDT 244
+A T+ TV M PP P T T T P + L T
Sbjct: 1135 IAYRESTIDTVSMACVRPPTTPTTTTSTTTTTTPKLTTTSTLPST 1179
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +2
Query: 14 TAPTVVMEVYHPPAVPVTLIQTQTAKDPEHLAVAALMDT 130
T TV M PP P T T T P+ + L T
Sbjct: 1141 TIDTVSMACVRPPTTPTTTTSTTTTTTPKLTTTSTLPST 1179
>U00066-7|AAY86272.1| 80|Caenorhabditis elegans Hypothetical
protein R12B2.8 protein.
Length = 80
Score = 27.1 bits (57), Expect = 2.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 280 PVDDTLPSRCWNCIHKCCYRQMYWI 206
P DT S C ++CCYR YW+
Sbjct: 33 PELDTFFSFGTCCDNECCYRLRYWV 57
>AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical
protein Y37D8A.26 protein.
Length = 88
Score = 27.1 bits (57), Expect = 2.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 181 CYWNCRWMIHFHHDCWNC 128
C+W CR + HH C NC
Sbjct: 62 CFW-CRCFMDVHHRCPNC 78
Score = 25.8 bits (54), Expect = 5.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 67 CYWNCRWMIHFHHHCWSC 14
C+W CR + HH C +C
Sbjct: 62 CFW-CRCFMDVHHRCPNC 78
>Z79758-8|CAI79179.1| 695|Caenorhabditis elegans Hypothetical
protein W10D5.3g protein.
Length = 695
Score = 26.6 bits (56), Expect = 3.3
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 268 TLPSRCWNCIHKCCYRQMYWILRCLSLNQCYWNC 167
T PSRC +C H C+ + +++ ++ + W C
Sbjct: 311 TTPSRCQDCTHLQCFDLLSYLM--MNEKKPTWQC 342
>Z79758-7|CAD98730.1| 763|Caenorhabditis elegans Hypothetical
protein W10D5.3f protein.
Length = 763
Score = 26.6 bits (56), Expect = 3.3
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 268 TLPSRCWNCIHKCCYRQMYWILRCLSLNQCYWNC 167
T PSRC +C H C+ + +++ ++ + W C
Sbjct: 378 TTPSRCQDCTHLQCFDLLSYLM--MNEKKPTWQC 409
>Z79758-6|CAD98729.1| 673|Caenorhabditis elegans Hypothetical
protein W10D5.3e protein.
Length = 673
Score = 26.6 bits (56), Expect = 3.3
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 268 TLPSRCWNCIHKCCYRQMYWILRCLSLNQCYWNC 167
T PSRC +C H C+ + +++ ++ + W C
Sbjct: 378 TTPSRCQDCTHLQCFDLLSYLM--MNEKKPTWQC 409
>Z79758-5|CAB54321.1| 687|Caenorhabditis elegans Hypothetical
protein W10D5.3d protein.
Length = 687
Score = 26.6 bits (56), Expect = 3.3
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 268 TLPSRCWNCIHKCCYRQMYWILRCLSLNQCYWNC 167
T PSRC +C H C+ + +++ ++ + W C
Sbjct: 376 TTPSRCQDCTHLQCFDLLSYLM--MNEKKPTWQC 407
>Z79758-4|CAB02133.2| 790|Caenorhabditis elegans Hypothetical
protein W10D5.3c protein.
Length = 790
Score = 26.6 bits (56), Expect = 3.3
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 268 TLPSRCWNCIHKCCYRQMYWILRCLSLNQCYWNC 167
T PSRC +C H C+ + +++ ++ + W C
Sbjct: 433 TTPSRCQDCTHLQCFDLLSYLM--MNEKKPTWQC 464
>Z79758-3|CAB02134.1| 689|Caenorhabditis elegans Hypothetical
protein W10D5.3a protein.
Length = 689
Score = 26.6 bits (56), Expect = 3.3
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 268 TLPSRCWNCIHKCCYRQMYWILRCLSLNQCYWNC 167
T PSRC +C H C+ + +++ ++ + W C
Sbjct: 378 TTPSRCQDCTHLQCFDLLSYLM--MNEKKPTWQC 409
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 26.6 bits (56), Expect = 3.3
Identities = 21/80 (26%), Positives = 25/80 (31%)
Frame = +2
Query: 14 TAPTVVMEVYHPPAVPVTLIQTQTAKDPEHLAVAALMDTVPTVVMEVYHPPAVPVTLIQT 193
T+PT V P V T T T+ T PT + P T T
Sbjct: 549 TSPTTAPTV---PPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVT 605
Query: 194 QTAQDPVHLAVAALMDTVPT 253
Q A P T+PT
Sbjct: 606 QPASQPATQPATTPTTTIPT 625
>Z78417-9|CAI70407.1| 700|Caenorhabditis elegans Hypothetical
protein C35C5.11 protein.
Length = 700
Score = 26.2 bits (55), Expect = 4.4
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2
Query: 115 CYRQMFWILRCLSLNQCYWNCRWMIHFHH 29
C + W+ R SL+ +W R I +H
Sbjct: 502 CLSLIIWVFRWFSLSHHHWTARLFIPSYH 530
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2
Query: 229 CYRQMYWILRCLSLNQCYWNCRWMIHFHH 143
C + W+ R SL+ +W R I +H
Sbjct: 502 CLSLIIWVFRWFSLSHHHWTARLFIPSYH 530
Score = 25.4 bits (53), Expect = 7.6
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 127 IHKCCYRQMFWILRCLSLNQCYWNCRWMIHFHHHCWS 17
IH ++Q+ I+ CLSL W RW HHH W+
Sbjct: 489 IHFTSFQQVAVII-CLSL--IIWVFRWFSLSHHH-WT 521
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,200,896
Number of Sequences: 27780
Number of extensions: 124521
Number of successful extensions: 443
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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