Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0366.Seq
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical ... 38 0.007
AF036706-12|AAK39280.1| 343|Caenorhabditis elegans Hypothetical... 36 0.017
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 36 0.022
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 35 0.038
U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical pr... 33 0.12
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 32 0.36
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 31 0.62
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 31 0.62
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 31 0.82
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 31 0.82
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.82
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.82
Z49911-2|CAA90130.1| 681|Caenorhabditis elegans Hypothetical pr... 30 1.1
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF101315-5|AAM34816.1| 457|Caenorhabditis elegans Hypothetical ... 30 1.1
AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3... 30 1.1
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z81110-4|CAB03256.1| 381|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical p... 29 2.5
Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL132948-8|CAC51068.1| 230|Caenorhabditis elegans Hypothetical ... 29 3.3
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 29 3.3
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 29 3.3
AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical ... 29 3.3
Z82084-1|CAB04978.1| 398|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 28 4.4
U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical pr... 28 4.4
U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical pr... 28 4.4
U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical pr... 28 5.8
AL132949-23|CAB70113.2| 152|Caenorhabditis elegans Hypothetical... 27 7.7
AL132949-6|CAB70102.1| 152|Caenorhabditis elegans Hypothetical ... 27 7.7
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 27 7.7
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 27 7.7
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ... 27 7.7
>AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical
protein Y59H11AM.4 protein.
Length = 185
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = -3
Query: 275 ISAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 129
IS E+T ++E KEKK +A +K K R TA P N +++ E +N K
Sbjct: 91 ISKEKTGEKEKKEKKKEATQKK-QKSVRKTAKPKNEEKDAEAPVENDDK 138
>AF036706-12|AAK39280.1| 343|Caenorhabditis elegans Hypothetical
protein T07A9.8 protein.
Length = 343
Score = 36.3 bits (80), Expect = 0.017
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = -3
Query: 284 KNGISAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQ-KKGTASSRL 108
K I+ E+ Q EK+ K ++ T+ + +++K+R W+N+ +K A
Sbjct: 4 KRKITDEKDAQHVPAEKREKVENWLKKSTEKPTSSQSDAEKKKKRPWRNKVRKLAAKKAA 63
Query: 107 SPSRWVNPA*RSRIIQNRIPTRKSRNWKRKRNIKK 3
+ + NP I++ + + ++ KRKR KK
Sbjct: 64 ADKKSENPEEPPLILEPKSSSDENTKKKRKRGPKK 98
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 35.9 bits (79), Expect = 0.022
Identities = 28/132 (21%), Positives = 50/132 (37%)
Frame = -3
Query: 524 KTSSREQKNXDIPSRKTKDLTLEKEGYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXX 345
K+ E+K + K+ + + EG KSD + E +E E +ED +
Sbjct: 55 KSKKSEKKEEPKKEEEKKEKSKKSEGKKSD-KKEEKKEEKKEEKEDKKEEKKEEKKEDDK 113
Query: 344 XXXXXXXXXERRTHDKFSIGKNGISAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQ 165
+ + DK S K E+ ++ +K K + K K + + +
Sbjct: 114 KDEKKDEKKDEKEEDKKSEDKKEDEKEKDDDKKEDKKDDKKSDNKDDKDDEKKEEKKDDK 173
Query: 164 REKERVWKNQKK 129
EK+ K +KK
Sbjct: 174 EEKKEEKKEEKK 185
Score = 29.1 bits (62), Expect = 2.5
Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 2/134 (1%)
Frame = -3
Query: 524 KTSSREQKNXDIPSRKTKDLTLEKEGYKSDYDRNEY-EERGSEHQEDNDSDXXXXXXXXX 348
K+ +E+K + K +KE K D ++E +E+ E +ED S+
Sbjct: 82 KSDKKEEKKEEKKEEKEDKKEEKKEEKKEDDKKDEKKDEKKDEKEEDKKSEDKKEDEKEK 141
Query: 347 XXXXXXXXXXERRTHDKFSIGKNGISAERTKQREVK-EKKSKANMRKTTKGKRTTADPPN 171
++++ +K ++ + E K EKK + K + K +
Sbjct: 142 DDDKKEDKKDDKKSDNKDDKDDEKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEKKEEEK 201
Query: 170 IQREKERVWKNQKK 129
+ +KE +++KK
Sbjct: 202 KEEKKEEKKEDEKK 215
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 35.1 bits (77), Expect = 0.038
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Frame = -3
Query: 458 EKEGYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXXXXXXXXXXXERRTHDKFSIGKN 279
+K+G K + ++ + E++ + +ED+ D E + DK K+
Sbjct: 81 KKDGDKKEEEKKDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKD 140
Query: 278 GISAERTKQREVKEKKSK--ANMRKTTKGKRTTADPPNIQREKERVWKNQKK 129
E+ +++ K KKSK + +K+ K KR D + +K+ K K
Sbjct: 141 EKKDEKKDEKKEKSKKSKKSSKSKKSKKSKREKKDEEKKEDDKKEDDKKDDK 192
>U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical
protein T26A5.5a protein.
Length = 1076
Score = 33.5 bits (73), Expect = 0.12
Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = -3
Query: 449 GYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXXXXXXXXXXXERRTHDKFSIGKNGIS 270
G + D + EY+ E QE+ + D RR+ + S KN S
Sbjct: 606 GQRDDQEEEEYDAEEPEDQEEEEED-------EYQAEEYTPTPVTRRSSSRRSGAKNDES 658
Query: 269 AERTKQREVKEKKSKA---NMRKTTKGKRTTADPPNIQREKERV 147
E + +++ KEK K R+ +K K+ ++E+ER+
Sbjct: 659 EEVSVKKDKKEKMEKVEKDEKRRNSKSKKDKISKEKKKKERERI 702
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 31.9 bits (69), Expect = 0.36
Identities = 25/110 (22%), Positives = 47/110 (42%)
Frame = -3
Query: 458 EKEGYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXXXXXXXXXXXERRTHDKFSIGKN 279
+K+G K + ++ + E++ + +ED+ D E + DK K+
Sbjct: 81 KKDGDKKEEEKKDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKD 140
Query: 278 GISAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 129
E+ K++ K KKS + +K+ K KR D + +K+ K K
Sbjct: 141 EKKDEK-KEKSKKSKKS-SKSKKSKKSKREKKDEDKKEDDKKEDDKKDDK 188
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 31.1 bits (67), Expect = 0.62
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = -3
Query: 260 TKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRWVNPA 81
+K + KEKKSK + +K K + +++ + ER K ++ + R PS P
Sbjct: 116 SKAEKSKEKKSKKDKKKKKKKRSSSSSDESSDERVER--KRRRSPSPKRRRRPSE--KPR 171
Query: 80 *RSRIIQNRIPTRKSRNWKRKRNIKK 3
RSR + P R+ + R + +
Sbjct: 172 KRSRSPRRERPRSPKRSREESRKLSR 197
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 31.1 bits (67), Expect = 0.62
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = -3
Query: 260 TKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRWVNPA 81
+K + KEKKSK + +K K + +++ + ER K ++ + R PS P
Sbjct: 116 SKAEKSKEKKSKKDKKKKKKKRSSSSSDESSDERVER--KRRRSPSPKRRRRPSE--KPR 171
Query: 80 *RSRIIQNRIPTRKSRNWKRKRNIKK 3
RSR + P R+ + R + +
Sbjct: 172 KRSRSPRRERPRSPKRSREESRKLSR 197
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 30.7 bits (66), Expect = 0.82
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 260 TKQREVKEKKSKANMRKTTKGKRTTADP 177
TK +EVKEKK K + K +GK+ P
Sbjct: 1287 TKSKEVKEKKEKKKVEKKDEGKKKPGRP 1314
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 30.7 bits (66), Expect = 0.82
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 260 TKQREVKEKKSKANMRKTTKGKRTTADP 177
TK +EVKEKK K + K +GK+ P
Sbjct: 1302 TKSKEVKEKKEKKKVEKKDEGKKKPGRP 1329
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.7 bits (66), Expect = 0.82
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 260 TKQREVKEKKSKANMRKTTKGKRTTADP 177
TK +EVKEKK K + K +GK+ P
Sbjct: 17113 TKSKEVKEKKEKKKVEKKDEGKKKPGRP 17140
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.7 bits (66), Expect = 0.82
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 260 TKQREVKEKKSKANMRKTTKGKRTTADP 177
TK +EVKEKK K + K +GK+ P
Sbjct: 17128 TKSKEVKEKKEKKKVEKKDEGKKKPGRP 17155
>Z49911-2|CAA90130.1| 681|Caenorhabditis elegans Hypothetical
protein M28.2 protein.
Length = 681
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 311 RTHDKFSIGKNGISAERTKQREVKEKKSKANMRKTTKGKRTTADP 177
RTH K ++GKNG +++T EK K K K+ A+P
Sbjct: 635 RTHSKNTVGKNG-KSDKTGTSGSMEKAGSKEKDKKKKKKKDKANP 678
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 30.3 bits (65), Expect = 1.1
Identities = 33/170 (19%), Positives = 63/170 (37%), Gaps = 4/170 (2%)
Frame = -3
Query: 503 KNXDIPSRKTKDLTLEKEGYKSDYDRNEYEERGSEH-QEDNDSDXXXXXXXXXXXXXXXX 327
K + + K+ ++E K+D ++ + EE+ + ++ + D
Sbjct: 65 KGEEKKEEEKKEEEKKEEEKKADDEKKKTEEKDDKKSKKTEEKDKLSVKKTQETKSERKD 124
Query: 326 XXXERRTHDKFSIGKNGISAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERV 147
ER+ DK K E K+ EVK+KK M G++ + K+
Sbjct: 125 KKDERKEDDKKEENKEKSKDEEKKKDEVKDKKEDEKMDDKKPGEKEEKKEEFKKEMKKEE 184
Query: 146 WKNQKKGTASSRLSPSR---WVNPA*RSRIIQNRIPTRKSRNWKRKRNIK 6
K +KK +P + + +++N I T S ++K K
Sbjct: 185 KKEEKKEEPKKNDAPKKEGETKGEVKKDALVENPIVTEMSDRDEKKEEKK 234
>AF101315-5|AAM34816.1| 457|Caenorhabditis elegans Hypothetical
protein T22H9.1 protein.
Length = 457
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = -3
Query: 482 RKTKDLTLEKEGYKSDYDRNEYEERGSEHQEDNDSD 375
+K K+ +E+EG + + +R+E E GSE +ED++ +
Sbjct: 187 KKPKNQNVEEEGSEDELERSEGSE-GSEEEEDDEDE 221
>AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3
protein.
Length = 689
Score = 30.3 bits (65), Expect = 1.1
Identities = 33/136 (24%), Positives = 50/136 (36%), Gaps = 2/136 (1%)
Frame = -3
Query: 524 KTSSREQKNXDIPSRKTKDLTLEKEGYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXX 345
K REQ + +D L+K+ K D++ E GSE ++ DS
Sbjct: 456 KAEGREQDDDSDDESTDEDYDLDKDMKKQKNDKDSSEGSGSEPDDEYDSGSEKDASGTGE 515
Query: 344 XXXXXXXXXERRTHDKFSIGKNGISAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQ 165
++ K E+ +RE KEK K K KGK+ T DP +
Sbjct: 516 SDPDEENIEPKKKESK----------EKKNKREKKEKPVKEKAVK--KGKK-TKDPNEPK 562
Query: 164 REKER--VWKNQKKGT 123
R +W N + +
Sbjct: 563 RATTAYIIWFNANRNS 578
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/84 (27%), Positives = 36/84 (42%)
Frame = -3
Query: 254 QREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRWVNPA*R 75
+R+ KEK K M T K K+ D ++EKER+ K +K + R
Sbjct: 235 ERKEKEKVEKNKMEMTEKIKKKDEDE-KAKKEKERIDKEEKIKKEVEEAEKKKKEEKEKR 293
Query: 74 SRIIQNRIPTRKSRNWKRKRNIKK 3
+ ++ + S N + RN KK
Sbjct: 294 RKEVKKNREEQLSINPEMSRNDKK 317
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = -3
Query: 509 EQKNXDIPSRKTKDLTLEKEGYKSDYDRNEYEERGSEHQEDNDSD 375
E + + SR + +K D D EY+++ S+ +E+N+++
Sbjct: 587 EMRERLLKSRAQRGAEEKKRNQSDDDDEKEYDDKDSDEEEENEAE 631
>Z81110-4|CAB03256.1| 381|Caenorhabditis elegans Hypothetical
protein T01D3.5 protein.
Length = 381
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 494 DIPSRKTKDLTLEKEGYKSDYDRNEYEERGSEH 396
D PSRK +D+ +E +++D E+EE+ H
Sbjct: 135 DTPSRKKRDVLVETHS-NNEHDEKEHEEKQHSH 166
>Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical
protein K10C8.3b protein.
Length = 141
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = -3
Query: 275 ISAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSR 96
+SA + +++ K K ++ ++ +R+ PN ++EK R + G++S + +
Sbjct: 10 LSASESSRKKSKSVKRCSSCKRPNSTRRSKTPDPNSEKEKVR----NRSGSSSKKEKKNS 65
Query: 95 WVNP 84
VNP
Sbjct: 66 LVNP 69
>Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical
protein F56G4.4 protein.
Length = 470
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Frame = -3
Query: 524 KTSSREQKNXDIPSRKTKDLTLEKEGYK-------SDYDRNEYEERGSEHQEDND 381
+ + +EQ D P+ K K LT E++ + D +R E EER E +ED D
Sbjct: 268 EANRKEQNYVDKPNNKFKKLTKEEKKAQWEERRRQKDTERAEDEERRREAEEDED 322
>AL132948-8|CAC51068.1| 230|Caenorhabditis elegans Hypothetical
protein Y39B6A.9 protein.
Length = 230
Score = 28.7 bits (61), Expect = 3.3
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Frame = -3
Query: 458 EKEGYKSD-YDRNEYEERGSEHQEDN----DSDXXXXXXXXXXXXXXXXXXXERRTHDKF 294
+K Y SD Y+ ++++ + S H EDN D ++ HDK+
Sbjct: 127 QKGYYGSDGYEHDDHKSKYSSHNEDNGFKKGYDGAGAGHDDKYTSYDKEDAGHKKHHDKY 186
Query: 293 SIGKNGISAERTKQREVKEKKSKANMRKTTKGKR 192
IGK G + + ++ E+ K +K + G R
Sbjct: 187 DIGKYG-AKQGGYAKQGHEEGWKNEAQKNSYGSR 219
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -3
Query: 272 SAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASS 114
S+E E +E+KSK +KT K+ T+ + + E+ER K KK S
Sbjct: 126 SSEDEDSDEEREQKSKKKSKKT---KKQTSSESSEESEEERKVKKSKKNKEKS 175
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -3
Query: 272 SAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 99
S+E +++ E K KKSK N K+ K + T++ + E E+ K KKG S S
Sbjct: 155 SSEESEE-ERKVKKSKKNKEKSVKKRAETSEESD---EDEKPSKKSKKGLKKKAKSES 208
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -3
Query: 272 SAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASS 114
S+E E +E+KSK +KT K+ T+ + + E+ER K KK S
Sbjct: 126 SSEDEDSDEEREQKSKKKSKKT---KKQTSSESSEESEEERKVKKSKKNKEKS 175
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -3
Query: 272 SAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 99
S+E +++ E K KKSK N K+ K + T++ + E E+ K KKG S S
Sbjct: 155 SSEESEE-ERKVKKSKKNKEKSVKKRAETSEESD---EDEKPSKKSKKGLKKKAKSES 208
>AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical
protein Y52D5A.1 protein.
Length = 914
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 446 ILLFLKSNPSSFEMEYXYFFAPVSSSFRSXPDIH*F 553
I +FLK N S F++ Y F +S+S P I+ F
Sbjct: 59 IYIFLKMNNSIFDLPVIYIFLKMSNSIFKLPVIYIF 94
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 446 ILLFLKSNPSSFEMEYXYFFAPVSSSFRSXPDIH*F 553
I +FLK N S F++ Y F +S+S P I+ F
Sbjct: 155 IYIFLKMNNSIFDLPVIYIFLKMSNSIFDLPVIYIF 190
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 446 ILLFLKSNPSSFEMEYXYFFAPVSSSFRSXPDIH*F 553
I +FLK N S F++ Y F +S+S P I+ F
Sbjct: 267 IYIFLKMNNSIFDLPVIYIFLKMSNSIFDLPVIYIF 302
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 446 ILLFLKSNPSSFEMEYXYFFAPVSSSFRSXPDIH*F 553
I +FLK N S F++ Y F +S+S P I+ F
Sbjct: 315 IYIFLKMNNSIFDLPVIYIFLKMSNSIFDLPVIYIF 350
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 446 ILLFLKSNPSSFEMEYXYFFAPVSSSFRSXPDIH*F 553
I +FLK N S F++ Y F +S+S P I+ F
Sbjct: 525 IYIFLKMNNSIFDLPVIYIFLKMSNSIFDLPVIYIF 560
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 446 ILLFLKSNPSSFEMEYXYFFAPVSSSFRSXPDIH*F 553
I +FLK N S F++ Y F +S+S P I+ F
Sbjct: 557 IYIFLKMNNSIFDLPVIYIFLEMSNSIFDLPVIYIF 592
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 446 ILLFLKSNPSSFEMEYXYFFAPVSSSFRSXPDIH*F 553
I +FLK N S F++ Y F +++S P I+ F
Sbjct: 27 IYIFLKMNNSIFDLPVIYIFLKMNNSIFDLPVIYIF 62
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 446 ILLFLKSNPSSFEMEYXYFFAPVSSSFRSXPDIH*F 553
I +FLK N S F++ Y F +++S P I+ F
Sbjct: 43 IYIFLKMNNSIFDLPVIYIFLKMNNSIFDLPVIYIF 78
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 446 ILLFLKSNPSSFEMEYXYFFAPVSSSFRSXPDIH*F 553
I +FLK N S F++ Y F +++S P I+ F
Sbjct: 299 IYIFLKMNNSIFDLPVIYIFLKMNNSIFDLPVIYIF 334
>Z82084-1|CAB04978.1| 398|Caenorhabditis elegans Hypothetical
protein ZK1053.1 protein.
Length = 398
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Frame = +2
Query: 338 RIFRIRNLCCMSRRCRYPPGVQIRVLH----IHYDRN-----QTCILLFLKSNPSSFEME 490
++F+ LC ++ C PPG Q++ + Y N Q+ + L L +N F
Sbjct: 326 KLFKWWVLCSLTENCMNPPGSQVKCIFERNWCKYQANCFRYDQSVLNLLLLNN---FSEI 382
Query: 491 YXYFFAPVSSSF 526
+ Y+ A +SSSF
Sbjct: 383 HKYYSAKLSSSF 394
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 28.3 bits (60), Expect = 4.4
Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 6/138 (4%)
Frame = -3
Query: 512 REQKNXDIPSRKTKDLTLEKEGYKSDYDRNEYEERGSEHQED---NDSDXXXXXXXXXXX 342
RE+K D + KD +KE +++ ++NE E++ E +ED D
Sbjct: 49 RERKLQDEFAELKKDEEKDKE--EAEKEKNEKEKKEEEKKEDGHEKKEDKKEDKKENEND 106
Query: 341 XXXXXXXXERRTHDKFSIGKNGISAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQR 162
+++ K + + + + E K+K+ K + + K T D ++
Sbjct: 107 EKKEKSKDDKKEESKEDKKEKTKTEDNEGKNEEKKKEKKEEKKDEKEKKEKTEDDKEKEK 166
Query: 161 EK---ERVWKNQKKGTAS 117
EK E+V ++ KK S
Sbjct: 167 EKTKEEKVKEDPKKDDKS 184
>U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical
protein C32E12.1 protein.
Length = 552
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -3
Query: 266 ERTKQREVKEKKSKANMRKTTKGKRTTA---DPPNIQREKERVWKNQKKGTASS 114
+++K ++ K+KKSK K K K + P +++ + E+ K KG S
Sbjct: 78 KKSKDKKPKDKKSKEKKPKAAKSKEVKSKDVKPKDVKSKDEKKKKKNSKGKKPS 131
>U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical
protein C46A5.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 284 KNGISAERTKQREVKEKKSKANMRKTTKGK-RTTADPPNIQREKERVWKNQK 132
KNG+S R K+++ K+ KSK ++ K + A PN Q + + KN K
Sbjct: 46 KNGLSCCRKKKKKSKKSKSKVTKKQPKKKVIKPLAPVPNEQLGEVVLVKNVK 97
>U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical
protein W09C3.2 protein.
Length = 460
Score = 27.9 bits (59), Expect = 5.8
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = -3
Query: 263 RTKQREVK-EKKSKANMRKTTKGKRTTADPPNIQREK--ERVWKNQKKGTASSRLSPSRW 93
+ K R+V +K K+ K +K K T D + + EK E + K KK SSR
Sbjct: 60 KKKLRKVNGDKIKKSKKSKKSKRKEVTVDKEDNEDEKKDENLEKKLKKDDGSSR----EK 115
Query: 92 VNPA*RSRIIQNRIPTRKSRNWKRKRNIK 6
V +SR I I R ++ ++K + K
Sbjct: 116 VEDQEQSRKIDRSIKDRNPKSLEQKSHQK 144
>AL132949-23|CAB70113.2| 152|Caenorhabditis elegans Hypothetical
protein Y53F4B.26 protein.
Length = 152
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = -3
Query: 314 RRTHDK-FSIGKNGISAERTKQREV-KEKKSKANM---RKTTKGKRTTADPPNIQREKER 150
RRT + S N + + RE +E +S+ M RK K + + + K+R
Sbjct: 45 RRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKR 104
Query: 149 VWKNQKKGTASSRLSPSRWVNP 84
VW +K+ + S NP
Sbjct: 105 VWMKKKRNEVAKTHDTSSVANP 126
>AL132949-6|CAB70102.1| 152|Caenorhabditis elegans Hypothetical
protein Y53F4B.7 protein.
Length = 152
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = -3
Query: 314 RRTHDK-FSIGKNGISAERTKQREV-KEKKSKANM---RKTTKGKRTTADPPNIQREKER 150
RRT + S N + + RE +E +S+ M RK K + + + K+R
Sbjct: 45 RRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKR 104
Query: 149 VWKNQKKGTASSRLSPSRWVNP 84
VW +K+ + S NP
Sbjct: 105 VWMKKKRNEVAKTHDTSSVANP 126
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = -3
Query: 314 RRTHDK-FSIGKNGISAERTKQREV-KEKKSKANM---RKTTKGKRTTADPPNIQREKER 150
RRT + S N + + RE +E +S+ M RK K + + + K+R
Sbjct: 45 RRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKR 104
Query: 149 VWKNQKKGTASSRLSPSRWVNP 84
VW +K+ + S NP
Sbjct: 105 VWMKKKRNEVAKTHDTSSVANP 126
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = -3
Query: 314 RRTHDK-FSIGKNGISAERTKQREV-KEKKSKANM---RKTTKGKRTTADPPNIQREKER 150
RRT + S N + + RE +E +S+ M RK K + + + K+R
Sbjct: 45 RRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKR 104
Query: 149 VWKNQKKGTASSRLSPSRWVNP 84
VW +K+ + S NP
Sbjct: 105 VWMKKKRNEVAKTHDTSSVANP 126
>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
protein F59H6.5 protein.
Length = 1486
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = -3
Query: 314 RRTHDK-FSIGKNGISAERTKQREV-KEKKSKANM---RKTTKGKRTTADPPNIQREKER 150
RRT + S N + + RE +E +S+ M RK K + + + K+R
Sbjct: 45 RRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKR 104
Query: 149 VWKNQKKGTASSRLSPSRWVNP 84
VW +K+ + S NP
Sbjct: 105 VWMKKKRNEVAKTHDTSSVANP 126
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,752,755
Number of Sequences: 27780
Number of extensions: 144934
Number of successful extensions: 945
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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