Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0366.Seq
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56660.1 68414.m06516 expressed protein 36 0.021
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 34 0.083
At5g53800.1 68418.m06685 expressed protein 32 0.33
At3g20550.1 68416.m02601 forkhead-associated domain-containing p... 32 0.33
At2g22795.1 68415.m02704 expressed protein 32 0.33
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 31 0.77
At3g28110.1 68416.m03508 hypothetical protein 31 0.77
At1g31460.1 68414.m03852 expressed protein 31 0.77
At3g25840.1 68416.m03219 protein kinase family protein contains ... 29 1.8
At1g48970.1 68414.m05489 eukaryotic translation initiation facto... 29 2.4
At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing ... 29 3.1
At4g33390.1 68417.m04746 hypothetical protein contains Pfam prof... 29 3.1
At3g29075.1 68416.m03637 glycine-rich protein 29 3.1
At5g48610.1 68418.m06012 expressed protein ; expression supporte... 28 4.1
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 28 4.1
At3g53040.1 68416.m05846 late embryogenesis abundant protein, pu... 28 4.1
At3g28770.1 68416.m03591 expressed protein 28 4.1
At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative simila... 28 4.1
At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related simil... 28 4.1
At5g55920.1 68418.m06975 nucleolar protein, putative similar to ... 28 5.4
At2g16140.1 68415.m01850 expressed protein contains similarity t... 28 5.4
At1g69070.1 68414.m07903 expressed protein 28 5.4
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 28 5.4
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 28 5.4
At2g30840.1 68415.m03760 2-oxoglutarate-dependent dioxygenase, p... 27 7.2
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 27 7.2
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 27 7.2
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 27 9.5
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 35.9 bits (79), Expect = 0.021
Identities = 26/124 (20%), Positives = 51/124 (41%)
Frame = -3
Query: 524 KTSSREQKNXDIPSRKTKDLTLEKEGYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXX 345
K E+++ +K ++L EKEG K + + E E + D +
Sbjct: 107 KVEEHEKEHKKGKEKKHEELEEEKEGKKKKNKKEKDESGPEEKNKKADKEKKHEDVSQEK 166
Query: 344 XXXXXXXXXERRTHDKFSIGKNGISAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQ 165
+ + +K G + K+++ KE+ SK+N K KGK+ + +++
Sbjct: 167 EELEEEDGKKNKKKEKDESGTEEKKKKPKKEKKQKEE-SKSNEDKKVKGKKEKGEKGDLE 225
Query: 164 REKE 153
+E E
Sbjct: 226 KEDE 229
Score = 27.1 bits (57), Expect = 9.5
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Frame = -3
Query: 548 SGCRAKI*KTSSREQKNXDIPSRKTKDLTLEKE-GYKSDYDRNEYEERGSEHQE-DNDSD 375
SG K K +++ + S + K + +KE G K D ++ + EE+ EH E D +
Sbjct: 185 SGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLEKED-EEKKKEHDETDQEMK 243
Query: 374 XXXXXXXXXXXXXXXXXXXERRTHDKFSIGKNGISAERTKQREVKEKKSKANM-RKTTKG 198
+++ DK K+ S E+ + +++K KK K K +G
Sbjct: 244 EKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDE-STEK-EDKKLKGKKGKGEKPEKEDEG 301
Query: 197 KRT 189
K+T
Sbjct: 302 KKT 304
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 33.9 bits (74), Expect = 0.083
Identities = 31/137 (22%), Positives = 60/137 (43%)
Frame = -3
Query: 539 RAKI*KTSSREQKNXDIPSRKTKDLTLEKEGYKSDYDRNEYEERGSEHQEDNDSDXXXXX 360
+ ++ + S + + D + K E+E + D DR +R SE ++ +DS+
Sbjct: 51 KKRVKSSDSEDDYDRDDDEEREKRKEKERERRRRDKDR---VKRRSERRKSSDSEDDVEE 107
Query: 359 XXXXXXXXXXXXXXERRTHDKFSIGKNGISAERTKQREVKEKKSKANMRKTTKGKRTTAD 180
R H++ GK +R + RE +E+K K R+ + +R +
Sbjct: 108 EDERDKRRVNEKERGHREHER-DRGK-----DRKRDREREERKDKEREREKDRERR---E 158
Query: 179 PPNIQREKERVWKNQKK 129
+REKERV + +++
Sbjct: 159 REREEREKERVKERERR 175
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 291 HWQERY*CRANETKRGERKEVEGEYEKDYER 199
H ++R R + +R ERK+ E E EKD ER
Sbjct: 126 HERDRGKDRKRDREREERKDKEREREKDRER 156
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 263 RTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 129
+ K+RE +EK+ K R+ K KR +D ++ KE+ K +K
Sbjct: 136 KRKEREEEEKERKRRRREKDKKKRNKSDKDGDKKRKEKKKKKSEK 180
>At3g20550.1 68416.m02601 forkhead-associated domain-containing
protein / FHA domain-containing protein weak similarity
to SP|Q28147 Nuclear inhibitor of protein phosphatase-1
(NIPP-1) (Protein phosphatase 1, regulatory inhibitor
subunit 8) {Bos taurus}; contains Pfam profile PF00498:
FHA domain
Length = 314
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -3
Query: 266 ERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREK-ERVWKNQKKGTASSRLSPSR 96
E + REV +K+ ++ T K +RT D R + ER + SSR SP R
Sbjct: 60 EGERDREVGDKRRRSGREDTEKRRRTRTDDERYSRGRHERSTSPSDRSHRSSRRSPER 117
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 31.9 bits (69), Expect = 0.33
Identities = 25/132 (18%), Positives = 51/132 (38%)
Frame = -3
Query: 524 KTSSREQKNXDIPSRKTKDLTLEKEGYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXX 345
+T E+ + ++ ++ +EKE S + E E E +E + +
Sbjct: 526 ETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKI 585
Query: 344 XXXXXXXXXERRTHDKFSIGKNGISAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQ 165
E + + I K E Q E KEK+++ ++ + + +
Sbjct: 586 EKEESAPQEETKEKENEKIEKE----ESASQEETKEKETETKEKEESSSNESQENVNTES 641
Query: 164 REKERVWKNQKK 129
+KE+V +N+KK
Sbjct: 642 EKKEQVEENEKK 653
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 30.7 bits (66), Expect = 0.77
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -3
Query: 302 DKFSIGKNGISAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQK 132
DK K+ E+ K +E KEKK K K K K ++EKER K +K
Sbjct: 67 DKEKAAKDKKEKEK-KDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERKEKERK 122
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -3
Query: 257 KQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRWVNP 84
K+++ KE+K K K K K+ ++EKER K +K S + R ++P
Sbjct: 86 KEKKDKERKEKEKKDKLEKEKKDKERKEKERKEKERKAKEKKDKEESEAAARYRILSP 143
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 266 ERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSR-LSP 102
++ K+R+ KEKK K K K ++ ++ KE+ K + + A R LSP
Sbjct: 88 KKDKERKEKEKKDKLEKEKKDKERKEKERKEKERKAKEKKDKEESEAAARYRILSP 143
>At3g28110.1 68416.m03508 hypothetical protein
Length = 354
Score = 30.7 bits (66), Expect = 0.77
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 509 EQKNXDIPSRKTKDLTLEKEGYKSDYDRNEYEERGSEHQEDND 381
E N D +D+ +++E + D NEYE+ +E ED D
Sbjct: 120 EVTNVDAAHNFYEDINVDEEDDIDEGDENEYEDEDNEEDEDMD 162
>At1g31460.1 68414.m03852 expressed protein
Length = 301
Score = 30.7 bits (66), Expect = 0.77
Identities = 23/87 (26%), Positives = 41/87 (47%)
Frame = -3
Query: 266 ERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRWVN 87
++TK++ KEK+ + ++ A PP+ E E+ K + K + +LSPS+ +
Sbjct: 155 QQTKKKLPKEKRRIVS--PSSSSSIDLATPPSTDSEPEKKSKPKSKSSWFDKLSPSKLIG 212
Query: 86 PA*RSRIIQNRIPTRKSRNWKRKRNIK 6
RS P + + N K +N K
Sbjct: 213 SIWRSS------PKKSTTNKKNLKNCK 233
>At3g25840.1 68416.m03219 protein kinase family protein contains
Pfam profile: PF00069 eukaryotic protein kinase domain
Length = 935
Score = 29.5 bits (63), Expect = 1.8
Identities = 27/141 (19%), Positives = 55/141 (39%)
Frame = -3
Query: 518 SSREQKNXDIPSRKTKDLTLEKEGYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXXXX 339
S+ Q N ++K E+E +S + +E+ +RG H D+ D
Sbjct: 175 SNSRQSNEGRARSRSKSHDRERETSRSRFAEDEFSDRGRHH--DSSRDYHHDRVDSVRTE 232
Query: 338 XXXXXXXERRTHDKFSIGKNGISAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQRE 159
+D+ + + +R+K+R++ +++ R + KR D +RE
Sbjct: 233 ERYHRRGRYEENDR-QYSREVLERDRSKERDM-DREGSIRDRDSEGSKRRDKDSDR-RRE 289
Query: 158 KERVWKNQKKGTASSRLSPSR 96
+ER + + + R R
Sbjct: 290 REREKRREIESDRERRKEKER 310
>At1g48970.1 68414.m05489 eukaryotic translation initiation factor
2B family protein / eIF-2B family protein similar to
guanine nucleotide exchange factor, eIF-2B, delta
subunit [Mus musculus] GI:529428; contains Pfam profile
PF01008: Initiation factor 2 subunit family
Length = 756
Score = 29.1 bits (62), Expect = 2.4
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = -3
Query: 269 AERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRWV 90
+E + KEK+ KA KTTK +R +E +R K KG S R S
Sbjct: 275 SESATTKPQKEKEPKALKDKTTKAERRAI------QEAQRAAKAAAKGEGSRRADESGRA 328
Query: 89 NP---A*RSRIIQNRIPTRKSRNWKRKRNIKK 3
NP A + + + R+P S + K ++K
Sbjct: 329 NPGKAAIKPQPKKERLPVTSSVSEKTAVAVEK 360
>At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing
protein
Length = 527
Score = 28.7 bits (61), Expect = 3.1
Identities = 26/99 (26%), Positives = 39/99 (39%)
Frame = -3
Query: 458 EKEGYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXXXXXXXXXXXERRTHDKFSIGKN 279
E+E ++S D++ ++ E D +SD ERR +K S +
Sbjct: 76 ERERHRSSRDKDRERDKVREGSRDKESDRERSSKERDRSDRDKPRDRERREREKRSSSR- 134
Query: 278 GISAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQR 162
S K+ EV E+ S+ R K ADP QR
Sbjct: 135 --SRREEKEPEVVERGSR---RHRDKKDEPEADPERDQR 168
>At4g33390.1 68417.m04746 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 779
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -3
Query: 302 DKFSIGKNGISAERTKQREVKEKKSK--ANMRKTTKGKRTTADPPNIQREKE 153
+K GK G+ E K REV EKK K ++ K+ +G + ++ E E
Sbjct: 697 EKAKEGKLGVEQELRKWREVSEKKRKNGSSHGKSIQGSKEKEAETSVSNETE 748
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -3
Query: 458 EKEGYKSDYDRNEYEERGSEHQEDNDSD 375
+KE YK +D ++Y+E+ + ++ ND D
Sbjct: 189 KKEQYKEHHDDDDYDEKKKKKKDYNDDD 216
>At5g48610.1 68418.m06012 expressed protein ; expression supported
by MPSS
Length = 470
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -3
Query: 257 KQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKG 126
++RE KEKKSK + K ++ D Q++KE K ++KG
Sbjct: 25 EKREGKEKKSKDRSKDKQKERKEKKDKHKDQKDKE---KGKEKG 65
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = -3
Query: 311 RTHDKFSIGKNGISAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQK 132
R K K G E T Q+E E K RK ++ K+ + Q+E K ++
Sbjct: 732 RKRKKSESKKEGGEGEET-QKEANESTKKERKRKKSESKKQSDGEEETQKEPSESTKKER 790
Query: 131 K 129
K
Sbjct: 791 K 791
>At3g53040.1 68416.m05846 late embryogenesis abundant protein,
putative / LEA protein, putative similar to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 479
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -3
Query: 524 KTSSREQKNXDIPS---RKTKDLTLEKEGYKSDYDRNEYEERGSEHQEDND 381
KT+ + ++ + S R+TKD T EK G DY + +E + +E D
Sbjct: 214 KTAEKAKETAEYTSDKARETKDKTAEKVGEYKDYTAEKAKETADKAREAKD 264
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 28.3 bits (60), Expect = 4.1
Identities = 25/123 (20%), Positives = 48/123 (39%)
Frame = -3
Query: 518 SSREQKNXDIPSRKTKDLTLEKEGYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXXXX 339
+S +QK D +K K + K + D+ EY + QEDN +
Sbjct: 935 TSSKQKGKD--KKKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKE---TTKSENSKL 989
Query: 338 XXXXXXXERRTHDKFSIGKNGISAERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQRE 159
+ + + S KN E +++ ++++K +K+ KR D + +
Sbjct: 990 KEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSK 1049
Query: 158 KER 150
KE+
Sbjct: 1050 KEK 1052
>At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative similar
to RNA helicase GB:A57514 GI:897915 from [Rattus
norvegicus]; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 989
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 266 ERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 129
ER +R ++K R +GK D +REKE+ K QKK
Sbjct: 63 ERDSKRRGEDKGRGRRERDRDRGKYLKRDRERREREKEKGRKKQKK 108
>At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related similar
to U2 small nuclear ribonucleoprotein auxiliary factor
35 kD subunit related protein 1 (sp|Q15695)
Length = 757
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -3
Query: 521 TSSREQKNXDIPSRKTKDLTLEKEGYKSDYDRNEYEERGSEHQEDNDSD 375
T SR ++ + S K + + GY+SD DR+ ++R +D +SD
Sbjct: 656 TESRHHQHKE--SDKKRSVETSPVGYQSDKDRDRSKQRQRYKSDDPESD 702
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -3
Query: 524 KTSSREQKNXDIPSRKTKDLTLEKEGYKSDYDRNEYEERGSEHQEDN 384
K S E S K +D + +++ YKSD ++ +G E+N
Sbjct: 668 KKRSVETSPVGYQSDKDRDRSKQRQRYKSDDPESDQSRKGKRQSEEN 714
>At5g55920.1 68418.m06975 nucleolar protein, putative similar to
SP|P46087 Proliferating-cell nucleolar antigen p120
(Proliferation-associated nucleolar protein p120) {Homo
sapiens}, SP|P40991 Nucleolar protein NOP2
{Saccharomyces cerevisiae}; contains Pfam profile
PF01189: NOL1/NOP2/sun family
Length = 682
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -3
Query: 266 ERTKQREVKEKKSKANMRKTTKGKRTTADP--PNIQREKERVWKNQ 135
++ K++ K K+ K + +P P Q++K R WKN+
Sbjct: 617 KKNKEKLAKSKEDKRGKKDKKSKSENVEEPSKPRKQKKKRREWKNE 662
>At2g16140.1 68415.m01850 expressed protein contains similarity to
hypothetical proteins
Length = 311
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -3
Query: 266 ERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 129
E R + K +KA +KT T D N E + +W+ ++K
Sbjct: 210 EEAMSRPIGVKAAKAKAKKTVTKTTTVEDKGNAMLEIQSIWEIKQK 255
>At1g69070.1 68414.m07903 expressed protein
Length = 901
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 494 DIPSRKTKDLTLEKEGYKSDYDRNEYEERGSEHQEDNDSD 375
D P R D LE+E + + +E E+ SE +ED+D +
Sbjct: 337 DKPKRGWIDDVLEREDNVDNSESDEDEDSESEEEEDDDGE 376
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 290 WRTCRGSYVLHTFPLHRIFRIRNLCCMSRRCR 385
W TC YVL+ +P+ I+ L C ++ CR
Sbjct: 646 WTTCPYCYVLYEYPI--IYEESVLKCQTKSCR 675
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles PF01846:
FF domain, PF00397: WW domain
Length = 946
Score = 27.9 bits (59), Expect = 5.4
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 6/146 (4%)
Frame = -3
Query: 524 KTSSREQKNXDIPSRKTKDLTLEKEGYKSDYDRNEYE-----ERGSEHQEDNDSDXXXXX 360
K +E+K + RK K+ +++ D +R E E E+G E + +SD
Sbjct: 793 KAKEKERKRDEEKVRKEKERDEKEKRKDKDKERREKEREREKEKGKERSKREESDGETAM 852
Query: 359 XXXXXXXXXXXXXXER-RTHDKFSIGKNGISAERTKQREVKEKKSKANMRKTTKGKRTTA 183
+R R H + N + + R+ +++ K++ + K++
Sbjct: 853 DVSEGHKDEKRKGKDRDRKHRRRH--HNNSDEDVSSDRDDRDESKKSSRKHGNDRKKSRK 910
Query: 182 DPPNIQREKERVWKNQKKGTASSRLS 105
+ + E E K QKK SSR S
Sbjct: 911 HANSPESESENRHKRQKK--ESSRRS 934
>At2g30840.1 68415.m03760 2-oxoglutarate-dependent dioxygenase,
putative similar to 2A6 (GI:599622) and tomato ethylene
synthesis regulatory protein E8 (SP|P10967)
Length = 362
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 65 LSCFFKPDLPNEKDLDD 115
LSCF PD+P +DL D
Sbjct: 153 LSCFMAPDVPETEDLPD 169
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -3
Query: 269 AERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQ 135
AE K++ KEK+ + +RK +GK TA + +K +KNQ
Sbjct: 455 AEEAKRKR-KEKEKEKLLRKKLEGKLLTA-KQKTEAQKREAFKNQ 497
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -3
Query: 269 AERTKQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQ 135
AE K++ KEK+ + +RK +GK TA + +K +KNQ
Sbjct: 408 AEEAKRKR-KEKEKEKLLRKKLEGKLLTA-KQKTEAQKREAFKNQ 450
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 524 KTSSREQKNXDIPSRKTKDLTLEKEGYKSDYDRNEYEERGSE 399
K S E+ + + K+ + E+EG KS EY+E+ S+
Sbjct: 158 KLKSLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSK 199
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,296,377
Number of Sequences: 28952
Number of extensions: 134313
Number of successful extensions: 747
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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