Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0365.Seq
         (648 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021313-1|AAX33461.1|  833|Drosophila melanogaster RE12810p pro...    28   9.5  
AY061148-1|AAL28696.1|  533|Drosophila melanogaster LD12257p pro...    28   9.5  
AF118379-1|AAD27816.1|  819|Drosophila melanogaster gamma-tubuli...    28   9.5  
AE014298-2870|AAF48971.2|  852|Drosophila melanogaster CG3917-PB...    28   9.5  
AE014298-2869|AAN09502.1|  819|Drosophila melanogaster CG3917-PC...    28   9.5  
AE014298-2868|AAN09501.1|  926|Drosophila melanogaster CG3917-PA...    28   9.5  

>BT021313-1|AAX33461.1|  833|Drosophila melanogaster RE12810p
           protein.
          Length = 833

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
 Frame = +2

Query: 113 T*QIRWLCSYNIKFISL*RYQTLWIQ-----HVIQHLTQLW 220
           T +++W CS  +  IS+ +YQ L+ Q     HV + L ++W
Sbjct: 676 TYEVKWPCSLVLNHISISKYQMLFRQLFYCKHVERQLCKIW 716


>AY061148-1|AAL28696.1|  533|Drosophila melanogaster LD12257p
           protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
 Frame = +2

Query: 113 T*QIRWLCSYNIKFISL*RYQTLWIQ-----HVIQHLTQLW 220
           T +++W CS  +  IS+ +YQ L+ Q     HV + L ++W
Sbjct: 283 TYEVKWPCSLVLNHISISKYQMLFRQLFYCKHVERQLCKIW 323


>AF118379-1|AAD27816.1|  819|Drosophila melanogaster gamma-tubulin
           ring protein Dgrip84 protein.
          Length = 819

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
 Frame = +2

Query: 113 T*QIRWLCSYNIKFISL*RYQTLWIQ-----HVIQHLTQLW 220
           T +++W CS  +  IS+ +YQ L+ Q     HV + L ++W
Sbjct: 602 TYEVKWPCSLVLNHISISKYQMLFRQLFYCKHVERQLCKIW 642


>AE014298-2870|AAF48971.2|  852|Drosophila melanogaster CG3917-PB,
           isoform B protein.
          Length = 852

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
 Frame = +2

Query: 113 T*QIRWLCSYNIKFISL*RYQTLWIQ-----HVIQHLTQLW 220
           T +++W CS  +  IS+ +YQ L+ Q     HV + L ++W
Sbjct: 602 TYEVKWPCSLVLNHISISKYQMLFRQLFYCKHVERQLCKIW 642


>AE014298-2869|AAN09502.1|  819|Drosophila melanogaster CG3917-PC,
           isoform C protein.
          Length = 819

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
 Frame = +2

Query: 113 T*QIRWLCSYNIKFISL*RYQTLWIQ-----HVIQHLTQLW 220
           T +++W CS  +  IS+ +YQ L+ Q     HV + L ++W
Sbjct: 602 TYEVKWPCSLVLNHISISKYQMLFRQLFYCKHVERQLCKIW 642


>AE014298-2868|AAN09501.1|  926|Drosophila melanogaster CG3917-PA,
           isoform A protein.
          Length = 926

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
 Frame = +2

Query: 113 T*QIRWLCSYNIKFISL*RYQTLWIQ-----HVIQHLTQLW 220
           T +++W CS  +  IS+ +YQ L+ Q     HV + L ++W
Sbjct: 676 TYEVKWPCSLVLNHISISKYQMLFRQLFYCKHVERQLCKIW 716


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,473,960
Number of Sequences: 53049
Number of extensions: 339043
Number of successful extensions: 408
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)