Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0364.Seq
         (348 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          20   6.3  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           20   6.3  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +1

Query: 166 QKXELQRXQXVGRYXQPMKPLAPVFHSSLQDRSNYLWF 279
           Q  EL+R    G+Y    + +    + +L +R   +WF
Sbjct: 99  QLVELEREFHHGKYLSRPRRIQIAENLNLSERQIKIWF 136


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +1

Query: 166 QKXELQRXQXVGRYXQPMKPLAPVFHSSLQDRSNYLWF 279
           Q  EL+R    G+Y    + +    + +L +R   +WF
Sbjct: 90  QLVELEREFHHGKYLSRPRRIQIAENLNLSERQIKIWF 127


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,314
Number of Sequences: 336
Number of extensions: 689
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)