Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0363.Seq
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    26   0.29 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.38 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   1.6  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   4.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   4.7  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   8.3  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   8.3  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 486 RRAGMATNSRLPSPINFLASHRKGF 412
           +RAG  T S +  P+  +  HR GF
Sbjct: 183 KRAGPRTESAVYEPVRIMGVHRPGF 207


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -3

Query: 343 SFRLNFSVFNIHFV 302
           SFR+NF++FN++ V
Sbjct: 112 SFRMNFAIFNLYMV 125


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 471 PCLPFCHQKFNGSQWQN 521
           P +  CHQ F+ S W N
Sbjct: 133 PSVSSCHQGFSSSTWCN 149


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 187 DNVLSSCST*PLELRTKMYL 246
           D  L+S    P+++RTK+YL
Sbjct: 107 DETLNSKPLKPVKIRTKVYL 126


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 187 DNVLSSCST*PLELRTKMYL 246
           D  L+S    P+++RTK+YL
Sbjct: 103 DETLNSKPLKPVKIRTKVYL 122


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 151 FSCPAVSHTLKRIGPRF 101
           F CP V+ T+    PR+
Sbjct: 170 FECPKVNETVAATHPRY 186


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -1

Query: 159 HQTSLVRLCPTH*NELARGSYGILEDVLRHPESQR 55
           HQT +    P   N     SY  +   + HPE+++
Sbjct: 47  HQTVIYHNNPRDPNRARSVSYSTVIQSVPHPETEK 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,954
Number of Sequences: 336
Number of extensions: 3284
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)