Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0363.Seq
(618 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 170 1e-43
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 66 4e-12
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 62 5e-11
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 59 4e-10
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 58 1e-09
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 58 1e-09
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 57 2e-09
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 55 9e-09
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 54 2e-08
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 48 1e-06
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 44 2e-05
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 42 5e-05
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 42 9e-05
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 40 4e-04
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 38 9e-04
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 36 0.004
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 36 0.006
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 34 0.019
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 30 0.23
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 29 0.54
SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 28 0.94
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 28 1.2
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 28 1.2
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 27 2.2
SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5 |Schizosacch... 27 2.2
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 26 3.8
SPAC4G9.16c |rpl901|rpl9-1|60S ribosomal protein L9|Schizosaccha... 26 5.0
SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|ch... 25 6.6
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 25 6.6
SPAC22F3.12c |rgs1||regulator of G-protein signaling Rgs1|Schizo... 25 8.8
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 170 bits (414), Expect = 1e-43
Identities = 80/116 (68%), Positives = 92/116 (79%), Gaps = 1/116 (0%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYI 182
GKTTFVKRHLTGEFEKKY+ATLGVEVHPL FHTN G I FNVWDTAGQEK GGLRDGYYI
Sbjct: 21 GKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEKLGGLRDGYYI 80
Query: 183 QGQCAIIMFDVTSRVTYKNVPN-WHEIWSVYVKVSLLSCAETKWILKTEKLRRKLL 347
QGQC IIMFDVTSR+TYKNVP+ W ++ V + ++ C K +K K++ K +
Sbjct: 81 QGQCGIIMFDVTSRITYKNVPHWWRDLVRVCENIPIVLCG-NKVDVKERKVKAKAI 135
Score = 159 bits (386), Expect = 3e-40
Identities = 72/82 (87%), Positives = 76/82 (92%)
Frame = +2
Query: 257 DLVRVCEGIPIVLCGNKVDIKDRKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLAR 436
DLVRVCE IPIVLCGNKVD+K+RKVKAK I FHRKKNLQYYDISAKSNYNFEKPFLWLAR
Sbjct: 106 DLVRVCENIPIVLCGNKVDVKERKVKAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLAR 165
Query: 437 KLIGDGNLEFVAMPALLPPEVQ 502
KL+G+ NLEFVA PAL PPEVQ
Sbjct: 166 KLVGNPNLEFVASPALAPPEVQ 187
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 66.1 bits (154), Expect = 4e-12
Identities = 28/85 (32%), Positives = 46/85 (54%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYI 182
GKT+ + R + +F+ Y AT+G++ + +R +WDTAGQE+F L Y
Sbjct: 23 GKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 82
Query: 183 QGQCAIIMFDVTSRVTYKNVPNWHE 257
AII++D+T+ ++ N W E
Sbjct: 83 DSSVAIIVYDITNHNSFVNTEKWIE 107
Score = 32.3 bits (70), Expect = 0.058
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 275 EGIPIVLCGNKVDIKDRKVKAKTIVFHRKKNLQ--YYDISAKSNYNFEKPFLWLARKLIG 448
+ + IVL GNK D+ D++ + + K L+ + + SAK+ +N + F +A+ L G
Sbjct: 115 DDVIIVLVGNKTDLADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQMLPG 174
Query: 449 DGNLE 463
N+E
Sbjct: 175 MENVE 179
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 62.5 bits (145), Expect = 5e-11
Identities = 26/83 (31%), Positives = 44/83 (53%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYI 182
GK+ + R + + Y++T+GV+ F ++ +WDTAGQE+F + YY
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYR 79
Query: 183 QGQCAIIMFDVTSRVTYKNVPNW 251
II++DVT + ++ NV W
Sbjct: 80 GAHGIIIVYDVTDQDSFNNVKQW 102
Score = 39.1 bits (87), Expect = 5e-04
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +2
Query: 275 EGIPIVLCGNKVDIKDRKVKAKTIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKL 442
EG+ +L GNK D+ D+KV ++ F N+ + + SAK + N E+ FL ++R++
Sbjct: 112 EGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 59.3 bits (137), Expect = 4e-10
Identities = 23/85 (27%), Positives = 47/85 (55%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYI 182
GKT+ + +++ +F K Y AT+G + + + +WDTAGQE+F L +Y
Sbjct: 20 GKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFYR 79
Query: 183 QGQCAIIMFDVTSRVTYKNVPNWHE 257
C ++++DV + +++ + +W +
Sbjct: 80 GADCCVLVYDVNNSKSFETLDSWRD 104
Score = 37.1 bits (82), Expect = 0.002
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = +2
Query: 275 EGIPIVLCGNKVDIKDRK---VKAKTIVF-HRKKNLQYYDISAKSNYNFEKPFLWLAR 436
E P +L GNKVD++++K K+K + F + + Y++ SAK N ++ F +A+
Sbjct: 116 ETFPFILLGNKVDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAK 173
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/83 (31%), Positives = 44/83 (53%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYI 182
GK+ + R EF + +T+GVE + I+ +WDTAGQE++ + YY
Sbjct: 22 GKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYR 81
Query: 183 QGQCAIIMFDVTSRVTYKNVPNW 251
A+I++D+T + ++ NV W
Sbjct: 82 GAVGALIVYDITKQSSFDNVGRW 104
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 57.6 bits (133), Expect = 1e-09
Identities = 24/85 (28%), Positives = 46/85 (54%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYI 182
GKT + + + +F ++Y AT+G + + + +WDTAGQE+F L +Y
Sbjct: 20 GKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMAFYR 79
Query: 183 QGQCAIIMFDVTSRVTYKNVPNWHE 257
C +I+++V + ++ +V NW +
Sbjct: 80 GADCCVIVYNVNNSKSFDSVENWRQ 104
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 56.8 bits (131), Expect = 2e-09
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYI 182
GK+ + R F ++ T+G++ + I+ +WDTAGQE+F + YY
Sbjct: 21 GKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYR 80
Query: 183 QGQCAIIMFDVTSRVTYKNVPNW 251
++++DVT + ++ NV W
Sbjct: 81 GAMGILLLYDVTDKKSFDNVRTW 103
Score = 30.3 bits (65), Expect = 0.23
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +2
Query: 275 EGIPIVLCGNKVDIKDRKVKA--KTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 442
E + +L GNK D +D++ + + + +++ + SAK+N N ++ F LAR++
Sbjct: 113 ENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 54.8 bits (126), Expect = 9e-09
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVE--VHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGY 176
GK++ V R + +F+ +T+G L N ++ +WDTAGQE++ L Y
Sbjct: 26 GKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTS-VKLEIWDTAGQERYKSLAPMY 84
Query: 177 YIQGQCAIIMFDVTSRVTYKNVPNW 251
Y CAI+++D+T + + +W
Sbjct: 85 YRNANCAIVVYDITQAASLEKAKSW 109
Score = 38.3 bits (85), Expect = 9e-04
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Frame = +2
Query: 275 EGIPIVLCGNKVDI-KDRKV--KAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 442
EGI I L GNK+D+ ++R+ KA + + NL +++ SAK+ N + F +A+KL
Sbjct: 119 EGIVIALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 54.0 bits (124), Expect = 2e-08
Identities = 23/87 (26%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGP----IRFNVWDTAGQEKFGGLRD 170
GK+ ++R + +++ + T+G++ + G I+ +WDTAGQEKF +
Sbjct: 21 GKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRSVAR 80
Query: 171 GYYIQGQCAIIMFDVTSRVTYKNVPNW 251
YY A++++DVT++ +++ + +W
Sbjct: 81 NYYRGAAGAVLVYDVTNKDSFEELSSW 107
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 48.0 bits (109), Expect = 1e-06
Identities = 21/84 (25%), Positives = 39/84 (46%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYI 182
GKT+ + ++ G F+++ TLGV I F++WD GQ +F +
Sbjct: 22 GKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPMVCN 81
Query: 183 QGQCAIIMFDVTSRVTYKNVPNWH 254
+ MFD++ + T ++ W+
Sbjct: 82 DAVAILFMFDLSRKSTLNSIKEWY 105
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 44.0 bits (99), Expect = 2e-05
Identities = 25/80 (31%), Positives = 40/80 (50%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYI 182
GKT + + T +F YV T+ + + + P ++DTAGQE + LR Y
Sbjct: 15 GKTCLLISYTTNKFPSDYVPTV-FDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYP 73
Query: 183 QGQCAIIMFDVTSRVTYKNV 242
Q ++ F VTS +++NV
Sbjct: 74 QTDVFLVCFSVTSPASFENV 93
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 42.3 bits (95), Expect = 5e-05
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVE-VHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYY 179
GKT+ + G F + Y T+ +H + N I ++WDTAGQE++ LR Y
Sbjct: 25 GKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNS--IELSLWDTAGQEEYDQLRSLSY 82
Query: 180 IQGQCAIIMFDVTSRVTYKNV 242
+I F V SR + +NV
Sbjct: 83 SDTHVIMICFAVDSRDSLENV 103
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 41.5 bits (93), Expect = 9e-05
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVE-VHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYY 179
GKT + +G F ++YV T+ + + + N I +WDTAGQE++ LR Y
Sbjct: 26 GKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEYDRLRPLSY 85
Query: 180 IQGQCAIIMFDVTSRVTYKNV-PNWH 254
++ F + + NV W+
Sbjct: 86 PNSNVILLCFSIDCPASLNNVTEKWY 111
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 39.5 bits (88), Expect = 4e-04
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYI 182
GKT+ + G F +YV T+ E + + ++ +WDTAGQE++ LR Y
Sbjct: 20 GKTSLLSVFTLGYFPTEYVPTV-FENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYA 78
Query: 183 QGQCAIIMFDVTSRVTYKNV-PNWHE 257
+ ++ F + S + +NV W E
Sbjct: 79 KAHIILVGFAIDSPDSLENVSTKWIE 104
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 38.3 bits (85), Expect = 9e-04
Identities = 19/85 (22%), Positives = 43/85 (50%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYI 182
GK+ + + F +Y T+ G + +V DTAGQE++ +R+ Y
Sbjct: 20 GKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGAL-LDVLDTAGQEEYSAMREQYMR 78
Query: 183 QGQCAIIMFDVTSRVTYKNVPNWHE 257
G+ ++++++TSR ++ + +++
Sbjct: 79 TGEGFLLVYNITSRSSFDEISTFYQ 103
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 36.3 bits (80), Expect = 0.004
Identities = 25/80 (31%), Positives = 35/80 (43%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYI 182
GKT + G F + YV T+ E + + I +WDTAGQE + LR Y
Sbjct: 18 GKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHIELALWDTAGQEDYDRLRPLSYP 76
Query: 183 QGQCAIIMFDVTSRVTYKNV 242
+I F V + + NV
Sbjct: 77 DSHVVLICFSVDAPESLDNV 96
Score = 25.0 bits (52), Expect = 8.8
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +2
Query: 257 DLVRVCEGIPIVLCGNKVDIKD 322
+++ C +PI+L G KVD+++
Sbjct: 103 EVLHFCSNLPILLVGCKVDLRN 124
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 35.5 bits (78), Expect = 0.006
Identities = 25/80 (31%), Positives = 35/80 (43%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYI 182
GKT + G F + YV T+ E + + + +WDTAGQE + LR Y
Sbjct: 18 GKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHVELALWDTAGQEDYDRLRPLSYP 76
Query: 183 QGQCAIIMFDVTSRVTYKNV 242
+I F V S + NV
Sbjct: 77 DSHVILICFAVDSPDSLDNV 96
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 33.9 bits (74), Expect = 0.019
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYI 182
GKTT + + GE + T+G V + + I F VWD GQ+K L Y+
Sbjct: 29 GKTTILYKLKLGEIVTT-IPTIGFNVETVEYRN----ISFTVWDVGGQDKIRPLWRHYFQ 83
Query: 183 QGQCAIIMFDVTSR 224
Q I + D R
Sbjct: 84 NTQGIIFVVDSNDR 97
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 30.3 bits (65), Expect = 0.23
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYI 182
GKTT + + + + T+G V + + I+FNVWD GQ+K L Y+
Sbjct: 33 GKTTILYKLKLNQ-SVVTIPTVGFNVETVTYKN----IKFNVWDVGGQDKIRPLWRHYFT 87
Query: 183 QGQCAIIMFD 212
+ I + D
Sbjct: 88 GTKGLIFVVD 97
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 29.1 bits (62), Expect = 0.54
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +3
Query: 108 GPIRFNVWDTAGQEKF-----GGLRDGYYIQGQCAIIMFDVTSR 224
G + N+WD GQE F RD + Q I +FDV SR
Sbjct: 49 GNLVLNLWDCGGQEAFMENYLSAQRDHIFRNVQVLIYVFDVESR 92
>SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 106
Score = 28.3 bits (60), Expect = 0.94
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 363 FFLWKTIVFALTFLSLISTLFPHKTIGIPS-HTRTKSH 253
F LW V+ ++ +SL ++ FPH + + S H T H
Sbjct: 11 FNLWSHGVYKISSISLSNSFFPHSFMFVKSLHLMTSQH 48
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 27.9 bits (59), Expect = 1.2
Identities = 19/70 (27%), Positives = 29/70 (41%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYI 182
GKTT +K L E + T G ++ L +RF +WD GQ+ Y+
Sbjct: 28 GKTTILKC-LLNEDVNEVSPTFGFQIRTLEVEG----LRFTIWDIGGQKTLRNFWKNYFE 82
Query: 183 QGQCAIIMFD 212
+ I + D
Sbjct: 83 STEAIIWVVD 92
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 218 GYVEHDDSTLSLNIVSVSKTTKLLLSGCVPHIKTNWPA-VRMEY*RMYFDTQS 63
G ++ D T + I+S + T + GC P+ KTNW +Y R+ D +S
Sbjct: 393 GEPQNVDETRASEILSQDELTVDVDLGCGPYAKTNWTCDFSYDYVRINADYRS 445
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/80 (18%), Positives = 39/80 (48%)
Frame = +3
Query: 3 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYI 182
GK++ +++ F + Y T+ + + + + DTAGQ+++ L + I
Sbjct: 18 GKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQ-EFATEIIDTAGQDEYSILNSKHSI 76
Query: 183 QGQCAIIMFDVTSRVTYKNV 242
++++ +TS+ +++ V
Sbjct: 77 GIHGYVLVYSITSKSSFEMV 96
>SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/49 (24%), Positives = 28/49 (57%)
Frame = +3
Query: 180 IQGQCAIIMFDVTSRVTYKNVPNWHEIWSVYVKVSLLSCAETKWILKTE 326
I+ A + ++TS+ TY N+ ++ + +VYV ++ + +T +L +
Sbjct: 383 IRNSTATRIIEMTSKSTYMNIADFEWLLTVYVDLANIPGIDTGTLLNNQ 431
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 501 NGSQWQNQIEKDLQDAQKYCSS 566
NGS N I K L DA+K+C++
Sbjct: 7 NGSNDNNNIIKKLVDAEKHCNA 28
>SPAC4G9.16c |rpl901|rpl9-1|60S ribosomal protein
L9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 25.8 bits (54), Expect = 5.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 299 GNKVDIKDRKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPFLW 427
G VDIK R V K+NL++ DI K N K +W
Sbjct: 16 GVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQGNTIKFIVW 58
>SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 168 DGYYIQGQCAIIMFDVTSRVTYKNVP 245
D Y G+C+ M +++ V YKN P
Sbjct: 53 DSRYADGRCSAAMRSLSNYVLYKNNP 78
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 25.4 bits (53), Expect = 6.6
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 365 NLQYYDISAKSNYNFEKPFLWL 430
N+ Y +I++K NY+ + + WL
Sbjct: 244 NMPYIEITSKHNYDIDFKYKWL 265
>SPAC22F3.12c |rgs1||regulator of G-protein signaling
Rgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 25.0 bits (52), Expect = 8.8
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -1
Query: 120 NELARGSYG--ILEDVLRHPESQRIFSRTLQSN 28
NE+ +GS ILE +LR P Q F L+ N
Sbjct: 333 NEVEKGSTNKEILETILRKPNLQTYFFEFLKKN 365
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,690,480
Number of Sequences: 5004
Number of extensions: 56327
Number of successful extensions: 212
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 271646730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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