Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0363.Seq
(618 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 4.2
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 4.2
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 4.2
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 4.2
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 5.5
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 7.3
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 9.6
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 9.6
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 9.6
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 21 9.6
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 21 9.6
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 9.6
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 21 9.6
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 4.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 510 QWQNQIEKDLQDA 548
+W+N+ E D QDA
Sbjct: 345 EWENENESDYQDA 357
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.2 bits (45), Expect = 4.2
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +2
Query: 323 RKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLA 433
+K A+ +V + + A N +PF WLA
Sbjct: 193 KKANARAVVLFTRAEDARGILEAARRSNLSQPFQWLA 229
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 4.2
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +3
Query: 9 TTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 152
T F RH + +++ L +T +G +++ +W G+EK
Sbjct: 984 TPFEHRHFISGIDSNLHVYAPLKIS-LDVNTPKGNMQWKIWPMKGEEK 1030
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.2 bits (45), Expect = 4.2
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +2
Query: 323 RKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLA 433
+K A+ +V + + A N +PF WLA
Sbjct: 283 KKANARAVVLFTRAEDARGILEAARRSNLSQPFQWLA 319
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 508 DPLNFWWQKGRHGNKLKVTVTN 443
D L+ W Q +H N +KV N
Sbjct: 117 DSLSCWLQMTKHHNFIKVCSVN 138
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.4 bits (43), Expect = 7.3
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = +3
Query: 483 FCHQKFNGSQWQNQIEKDL 539
FC+ + N + W+N + +L
Sbjct: 538 FCYFRRNAATWKNAVRHNL 556
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +3
Query: 198 IIMFDVTSRVTYKNVPNWHEIWSVYVK 278
++ F S V Y+ VP+ ++WS ++
Sbjct: 387 VLGFGYESNVKYQVVPSALQMWSTSLR 413
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 175 YPSLRPPNFSC 143
YP +R P+F C
Sbjct: 112 YPGMRAPSFRC 122
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +3
Query: 198 IIMFDVTSRVTYKNVPNWHEIWSVYVK 278
++ F S V Y+ VP+ ++WS ++
Sbjct: 387 VLGFGYESNVKYQVVPSALQMWSTSLR 413
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 21.0 bits (42), Expect = 9.6
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 472 HACPSATRSSMDLNGRTKLKKIFKMHKNTALPEGR 576
H P RSS +K+IF +N A+ E R
Sbjct: 140 HQLPLKQRSSEFCGKNIGMKRIFTSSQNIAVIEYR 174
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +3
Query: 198 IIMFDVTSRVTYKNVPNWHEIWSVYVK 278
++ F S V Y+ VP+ ++WS ++
Sbjct: 13 VLGFGYESNVKYQVVPSALQMWSTSLR 39
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.0 bits (42), Expect = 9.6
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -2
Query: 227 NSRGYVEHDDSTLSLNIVSVSKTTKLLLSGCV 132
+S+ V DD+ ++S++K T ++SG V
Sbjct: 401 DSQLLVISDDNIHIKGVISLNKLTSYVISGIV 432
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 175 YPSLRPPNFSC 143
YP +R P+F C
Sbjct: 112 YPGMRAPSFRC 122
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,472
Number of Sequences: 438
Number of extensions: 4200
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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