Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0362.Seq
         (339 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146745-1|AAO12105.1|  153|Anopheles gambiae odorant-binding pr...    22   7.3  
AJ697725-1|CAG26918.1|  153|Anopheles gambiae putative odorant-b...    22   7.3  
AF437886-1|AAL84181.1|  153|Anopheles gambiae odorant binding pr...    22   7.3  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    21   9.6  

>AY146745-1|AAO12105.1|  153|Anopheles gambiae odorant-binding
          protein AgamOBP3 protein.
          Length = 153

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = -1

Query: 42 HQLCWNCRWXI 10
          H  CW+ RW +
Sbjct: 3  HDSCWSSRWRV 13


>AJ697725-1|CAG26918.1|  153|Anopheles gambiae putative
          odorant-binding protein OBPjj15 protein.
          Length = 153

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = -1

Query: 42 HQLCWNCRWXI 10
          H  CW+ RW +
Sbjct: 3  HDSCWSSRWRV 13


>AF437886-1|AAL84181.1|  153|Anopheles gambiae odorant binding
          protein protein.
          Length = 153

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = -1

Query: 42 HQLCWNCRWXI 10
          H  CW+ RW +
Sbjct: 3  HDSCWSSRWRV 13


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 216 SCIHKCCYHRMYW 178
           S +HK  +H MYW
Sbjct: 353 SGLHKSPHHDMYW 365


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 267,126
Number of Sequences: 2352
Number of extensions: 4487
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 24206952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)