Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0362.Seq
(339 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05080-1|AAA28420.1| 873|Drosophila melanogaster calphotin prot... 33 0.072
AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P... 30 0.67
BT011193-1|AAR88554.1| 155|Drosophila melanogaster LP01645p pro... 29 1.5
AY070893-1|AAL48515.1| 195|Drosophila melanogaster LP01670p pro... 29 1.5
DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr... 27 4.7
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p... 27 4.7
AY071028-1|AAL48650.1| 663|Drosophila melanogaster RE11035p pro... 27 4.7
AY058786-1|AAL14015.1| 557|Drosophila melanogaster SD08412p pro... 27 4.7
AE014134-1055|AAN10582.1| 557|Drosophila melanogaster CG31642-P... 27 4.7
AE014134-629|AAF51091.1| 663|Drosophila melanogaster CG8852-PA ... 27 4.7
AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB... 27 4.7
AY069546-1|AAL39691.1| 429|Drosophila melanogaster LD27370p pro... 27 8.2
AE014296-2693|AAF49495.2| 199|Drosophila melanogaster CG13062-P... 27 8.2
AE014296-2473|AAF49667.2| 429|Drosophila melanogaster CG6854-PA... 27 8.2
>L05080-1|AAA28420.1| 873|Drosophila melanogaster calphotin
protein.
Length = 873
Score = 33.5 bits (73), Expect = 0.072
Identities = 32/94 (34%), Positives = 36/94 (38%)
Frame = +1
Query: 16 PPAVPAQLMQAQTA*DLVHPAXVALMDTVPTVVMEVXHPPAVPVTLIQTQTARDPVHPVV 195
P AV A + A V PA VA PT V V PP + T T P P+
Sbjct: 20 PSAVAAPVQVVSPAAVAVAPAVVAPAPAAPTAVTPVAPPPTLASVQPATVTVPAPA-PIA 78
Query: 196 AALMDTAPTXRDGSVSSTGSPVTLIQTXTAXXPV 297
AA AP V+S PV T A PV
Sbjct: 79 AA--SVAP------VASVAPPVVAAPTPPAASPV 104
>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
protein.
Length = 3539
Score = 30.3 bits (65), Expect = 0.67
Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Frame = +1
Query: 16 PPAVPAQLMQAQTA*DLVHPAXVALMD-TVPTVVMEVXHPPA-----VPVTLIQTQTARD 177
PPAV ++ A A + P A M VP V V PP +PV I
Sbjct: 1249 PPAVAPAILNAAPAPPALQPPIFASMPVAVPVVPAPVPPPPVAAAAPLPVAAIVPLPVAA 1308
Query: 178 PVHPVVAALMDTAPTXR 228
P P VA + PT R
Sbjct: 1309 PAPPPVATALVHPPTRR 1325
>BT011193-1|AAR88554.1| 155|Drosophila melanogaster LP01645p
protein.
Length = 155
Score = 29.1 bits (62), Expect = 1.5
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +1
Query: 70 HPAXVALMDTVP--TVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPTXRDGSVS 243
+P MD++P T E PPAV T T+ + + T+P D S
Sbjct: 9 NPMMFVPMDSIPACTPPTESSRPPAVMPMATSTATSAGSHPRASTSRLSTSPMRTDTSPR 68
Query: 244 STGSPVTL 267
GSP+ L
Sbjct: 69 EPGSPLLL 76
>AY070893-1|AAL48515.1| 195|Drosophila melanogaster LP01670p
protein.
Length = 195
Score = 29.1 bits (62), Expect = 1.5
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +1
Query: 70 HPAXVALMDTVP--TVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPTXRDGSVS 243
+P MD++P T E PPAV T T+ + + T+P D S
Sbjct: 9 NPMMFVPMDSIPACTPPTESSRPPAVMPMATSTATSAGSHPRASTSRLSTSPMRTDTSPR 68
Query: 244 STGSPVTL 267
GSP+ L
Sbjct: 69 EPGSPLLL 76
>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
protein.
Length = 2176
Score = 27.5 bits (58), Expect = 4.7
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Frame = +1
Query: 16 PPAVPAQLMQAQTA*DLVHPAXV----ALMDTVPTVVME--VXHPPAVPVTLIQTQTARD 177
PPA PA + A T P+ L T+P V + PP +P T TQ+A+
Sbjct: 903 PPATPAPVPPATTTPPPSPPSLATETPTLPPTLPPVTLPPVTQPPPTIPPTPPSTQSAQT 962
Query: 178 PVHPVVAALMDTAP 219
P A + T P
Sbjct: 963 LPPPTSAINVYTTP 976
>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
protein.
Length = 2165
Score = 27.5 bits (58), Expect = 4.7
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Frame = +1
Query: 16 PPAVPAQLMQAQTA*DLVHPAXV----ALMDTVPTVVME--VXHPPAVPVTLIQTQTARD 177
PPA PA + A T P+ L T+P V + PP +P T TQ+A+
Sbjct: 892 PPATPAPVPPATTTPPPSPPSLATETPTLPPTLPPVTLPPVTQPPPTIPPTPPSTQSAQT 951
Query: 178 PVHPVVAALMDTAP 219
P A + T P
Sbjct: 952 LPPPTSAINVYTTP 965
>AY071028-1|AAL48650.1| 663|Drosophila melanogaster RE11035p
protein.
Length = 663
Score = 27.5 bits (58), Expect = 4.7
Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -1
Query: 180 WIPRC-LSLNQCYWNCRWMXHFHH 112
W P+ +S++ W+C+WM +F H
Sbjct: 388 WNPQLRISIDDNPWSCQWMLNFSH 411
>AY058786-1|AAL14015.1| 557|Drosophila melanogaster SD08412p
protein.
Length = 557
Score = 27.5 bits (58), Expect = 4.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 142 PVTLIQTQTARDPVHPVVAALMD-TAPTXRDGSVSSTGSPVTLIQTXT 282
P T+++ QTAR P+ AL A + R G S+ S V QT T
Sbjct: 291 PTTMVRRQTARRTGEPIGIALQSAVASSSRSGKAGSS-SGVAKAQTKT 337
>AE014134-1055|AAN10582.1| 557|Drosophila melanogaster CG31642-PA
protein.
Length = 557
Score = 27.5 bits (58), Expect = 4.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 142 PVTLIQTQTARDPVHPVVAALMD-TAPTXRDGSVSSTGSPVTLIQTXT 282
P T+++ QTAR P+ AL A + R G S+ S V QT T
Sbjct: 291 PTTMVRRQTARRTGEPIGIALQSAVASSSRSGKAGSS-SGVAKAQTKT 337
>AE014134-629|AAF51091.1| 663|Drosophila melanogaster CG8852-PA
protein.
Length = 663
Score = 27.5 bits (58), Expect = 4.7
Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -1
Query: 180 WIPRC-LSLNQCYWNCRWMXHFHH 112
W P+ +S++ W+C+WM +F H
Sbjct: 388 WNPQLRISIDDNPWSCQWMLNFSH 411
>AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB
protein.
Length = 1984
Score = 27.5 bits (58), Expect = 4.7
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Frame = +1
Query: 16 PPAVPAQLMQAQTA*DLVHPAXV----ALMDTVPTVVME--VXHPPAVPVTLIQTQTARD 177
PPA PA + A T P+ L T+P V + PP +P T TQ+A+
Sbjct: 696 PPATPAPVPPATTTPPPSPPSLATETPTLPPTLPPVTLPPVTQPPPTIPPTPPSTQSAQT 755
Query: 178 PVHPVVAALMDTAP 219
P A + T P
Sbjct: 756 LPPPTSAINVYTTP 769
>AY069546-1|AAL39691.1| 429|Drosophila melanogaster LD27370p
protein.
Length = 429
Score = 26.6 bits (56), Expect = 8.2
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Frame = +1
Query: 31 AQLMQAQT-A*DLVH--PAXVALMDTVPTVVMEVXHPPAV---PVTLIQTQTARDPVHPV 192
AQLM+ + A DL P + V + + PPA P ++ T +A+ P
Sbjct: 212 AQLMELEKEAEDLSRKPPPPQQMTSPVAPSLQVLVEPPAAHCSPPPMVTTTSAQVQ-QPG 270
Query: 193 VAALMDTAPTXRDGSVSSTGSPV 261
AA++ A T SVSS G+P+
Sbjct: 271 SAAVLAPATTTSASSVSSNGAPM 293
>AE014296-2693|AAF49495.2| 199|Drosophila melanogaster CG13062-PA
protein.
Length = 199
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Frame = +1
Query: 100 VPTVVMEVXHPPAV----PVTLIQTQTARDPVH 186
+PTVV V HPP + P +I+ DP H
Sbjct: 154 LPTVVKTVVHPPIIKAYHPAPIIKAYHPYDPFH 186
>AE014296-2473|AAF49667.2| 429|Drosophila melanogaster CG6854-PA,
isoform A protein.
Length = 429
Score = 26.6 bits (56), Expect = 8.2
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Frame = +1
Query: 31 AQLMQAQT-A*DLVH--PAXVALMDTVPTVVMEVXHPPAV---PVTLIQTQTARDPVHPV 192
AQLM+ + A DL P + V + + PPA P ++ T +A+ P
Sbjct: 212 AQLMELEKEAEDLSRKPPPPQQMTSPVAPSLQVLVEPPAAHCSPPPMVTTTSAQVQ-QPG 270
Query: 193 VAALMDTAPTXRDGSVSSTGSPV 261
AA++ A T SVSS G+P+
Sbjct: 271 SAAVLAPATTTSASSVSSNGAPM 293
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,277,577
Number of Sequences: 53049
Number of extensions: 184688
Number of successful extensions: 553
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 777358641
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -