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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0362.Seq
         (339 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51998-5|AAL00856.2|  648|Caenorhabditis elegans Hypothetical pr...    36   0.006
U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical pr...    32   0.091
AC024785-3|AAF60597.2|  456|Caenorhabditis elegans Hypothetical ...    31   0.28 
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    29   1.1  
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr...    28   1.5  
AF125443-1|AAD12801.1|  783|Caenorhabditis elegans Hypothetical ...    28   1.5  
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ...    28   2.0  
Z81585-4|CAB04687.1|  345|Caenorhabditis elegans Hypothetical pr...    27   4.5  
Z81455-6|CAN86597.1|  695|Caenorhabditis elegans Hypothetical pr...    27   4.5  
Z81455-5|CAJ90505.1|  611|Caenorhabditis elegans Hypothetical pr...    27   4.5  
Z81455-4|CAJ76928.1|  680|Caenorhabditis elegans Hypothetical pr...    27   4.5  
Z81455-2|CAD54123.1|  745|Caenorhabditis elegans Hypothetical pr...    27   4.5  
Z81455-1|CAB03807.2|  792|Caenorhabditis elegans Hypothetical pr...    27   4.5  
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-...    27   4.5  
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-...    27   4.5  
AL032637-27|CAN86620.1|  695|Caenorhabditis elegans Hypothetical...    27   4.5  
AL032637-26|CAJ90512.1|  611|Caenorhabditis elegans Hypothetical...    27   4.5  
AL032637-25|CAJ76956.1|  680|Caenorhabditis elegans Hypothetical...    27   4.5  
AL032637-24|CAD54171.1|  745|Caenorhabditis elegans Hypothetical...    27   4.5  
AL032637-23|CAA21625.2|  792|Caenorhabditis elegans Hypothetical...    27   4.5  
AL032637-1|CAD54169.1|  555|Caenorhabditis elegans Hypothetical ...    27   4.5  
AL032626-23|CAE17974.1|   88|Caenorhabditis elegans Hypothetical...    26   6.0  
Z22179-5|CAA80162.2|  786|Caenorhabditis elegans Hypothetical pr...    26   7.9  
AF016432-7|AAB65382.1|  342|Caenorhabditis elegans Seven tm rece...    26   7.9  
AC006633-6|AAK68378.4|  578|Caenorhabditis elegans Hypothetical ...    26   7.9  

>U51998-5|AAL00856.2|  648|Caenorhabditis elegans Hypothetical
           protein C12D12.1b protein.
          Length = 648

 Score = 36.3 bits (80), Expect = 0.006
 Identities = 29/112 (25%), Positives = 37/112 (33%), Gaps = 2/112 (1%)
 Frame = +1

Query: 7   VYXPPAVPAQLMQAQTA*DLVHPAXVALMDTVPTVVMEVXH-PPAVPVTLIQTQTARDPV 183
           V  PP  P       T    + P     + T PT V    + PPA P T   T       
Sbjct: 458 VLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTIGT 517

Query: 184 HPVVAALMDTAPTXRDGSVSSTGSPVTLIQ-TXTAXXPVHXAVASLMDTVST 336
            P   A + T  T      SST +P   +  T     P    V +   T +T
Sbjct: 518 SPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTT 569



 Score = 27.1 bits (57), Expect = 3.4
 Identities = 28/109 (25%), Positives = 34/109 (31%), Gaps = 3/109 (2%)
 Frame = +1

Query: 19  PAVPAQLMQAQTA*DLVHPAXVALMDTVPTVVMEVXHPPAVP---VTLIQTQTARDPVHP 189
           P  PA L    TA   V+P       T P         P VP    T   T T+      
Sbjct: 519 PTAPANLTTPTTA--PVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTT 576

Query: 190 VVAALMDTAPTXRDGSVSSTGSPVTLIQTXTAXXPVHXAVASLMDTVST 336
                  T PT    +  ST +P T   T  A  P      +   T+ T
Sbjct: 577 TTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTIPT 625


>U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical
           protein C12D12.1a protein.
          Length = 769

 Score = 32.3 bits (70), Expect = 0.091
 Identities = 24/87 (27%), Positives = 30/87 (34%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   VYXPPAVPAQLMQAQTA*DLVHPAXVALMDTVPTVVMEVXH-PPAVPVTLIQTQTARDPV 183
           V  PP  P       T    + P     + T PT V    + PPA P T   T T    +
Sbjct: 458 VLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTT--ATPTTVGTM 515

Query: 184 HPVVAALMDTAPTXRDGSVSSTGSPVT 264
            P         PT      + T +PVT
Sbjct: 516 TPSTGTTTVPVPTTTGSPTTQTTAPVT 542



 Score = 27.1 bits (57), Expect = 3.4
 Identities = 28/109 (25%), Positives = 34/109 (31%), Gaps = 3/109 (2%)
 Frame = +1

Query: 19  PAVPAQLMQAQTA*DLVHPAXVALMDTVPTVVMEVXHPPAVP---VTLIQTQTARDPVHP 189
           P  PA L    TA   V+P       T P         P VP    T   T T+      
Sbjct: 640 PTAPANLTTPTTA--PVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTT 697

Query: 190 VVAALMDTAPTXRDGSVSSTGSPVTLIQTXTAXXPVHXAVASLMDTVST 336
                  T PT    +  ST +P T   T  A  P      +   T+ T
Sbjct: 698 TTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTIPT 746


>AC024785-3|AAF60597.2|  456|Caenorhabditis elegans Hypothetical
           protein Y46C8AL.2 protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 0.28
 Identities = 17/62 (27%), Positives = 24/62 (38%)
 Frame = +1

Query: 97  TVPTVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPTXRDGSVSSTGSPVTLIQT 276
           T PT +      P  P T+  T T   P  P       T PT    + ++  +P T+  T
Sbjct: 251 TTPTTMKSTPTTPTTPTTMKSTPTT--PTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKST 308

Query: 277 XT 282
            T
Sbjct: 309 PT 310



 Score = 30.7 bits (66), Expect = 0.28
 Identities = 17/62 (27%), Positives = 24/62 (38%)
 Frame = +1

Query: 97  TVPTVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPTXRDGSVSSTGSPVTLIQT 276
           T PT +      P  P T+  T T   P  P       T PT    + ++  +P T+  T
Sbjct: 365 TTPTTMKSTPTTPTTPTTMKSTPTT--PTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKST 422

Query: 277 XT 282
            T
Sbjct: 423 PT 424



 Score = 28.3 bits (60), Expect = 1.5
 Identities = 17/64 (26%), Positives = 22/64 (34%)
 Frame = +1

Query: 73  PAXVALMDTVPTVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPTXRDGSVSSTG 252
           P  +    T PT +      P  P T+  T T   P  P       T PT      S+  
Sbjct: 165 PTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTT--PTTPTTMKSTPTTPTTPTTMKSTPT 222

Query: 253 SPVT 264
           +P T
Sbjct: 223 TPTT 226



 Score = 27.5 bits (58), Expect = 2.6
 Identities = 17/64 (26%), Positives = 22/64 (34%)
 Frame = +1

Query: 73  PAXVALMDTVPTVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPTXRDGSVSSTG 252
           P  +    T PT +      P  P T+  T T   P  P       T PT      S+  
Sbjct: 279 PTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTT--PTTPTTMKSTPTTPTTPTTMKSTPT 336

Query: 253 SPVT 264
           +P T
Sbjct: 337 TPTT 340


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 9/105 (8%)
 Frame = +1

Query: 7   VYXPPAVPAQLMQAQTA*DLVHPAXVALMDTVPTVVMEVXH-PPAVPVTLI--------Q 159
           V  PP  P       T    + P     + T PT V    + PPA P T          Q
Sbjct: 458 VLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTSKQ 517

Query: 160 TQTARDPVHPVVAALMDTAPTXRDGSVSSTGSPVTLIQTXTAXXP 294
           T T    +  +  +++ + PT    +  ++ SP T     TA  P
Sbjct: 518 TNTISPHLSTITGSIVTSTPTM---APQTSASPTTTPTHTTASQP 559



 Score = 27.1 bits (57), Expect = 3.4
 Identities = 28/109 (25%), Positives = 34/109 (31%), Gaps = 3/109 (2%)
 Frame = +1

Query: 19   PAVPAQLMQAQTA*DLVHPAXVALMDTVPTVVMEVXHPPAVP---VTLIQTQTARDPVHP 189
            P  PA L    TA   V+P       T P         P VP    T   T T+      
Sbjct: 696  PTAPANLTTPTTA--PVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTT 753

Query: 190  VVAALMDTAPTXRDGSVSSTGSPVTLIQTXTAXXPVHXAVASLMDTVST 336
                   T PT    +  ST +P T   T  A  P      +   T+ T
Sbjct: 754  TTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTIPT 802


>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
            F40H6.5 protein.
          Length = 1288

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 15/50 (30%), Positives = 19/50 (38%)
 Frame = +1

Query: 97   TVPTVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPTXRDGSVSS 246
            T+ TV M    PP  P T   T T   P     + L  T+       VS+
Sbjct: 1141 TIDTVSMACVRPPTTPTTTTSTTTTTTPKLTTTSTLPSTSTAIATTDVST 1190


>AF125443-1|AAD12801.1|  783|Caenorhabditis elegans Hypothetical
           protein H32C10.3 protein.
          Length = 783

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -1

Query: 180 WIPRCLSLNQCYWNCRWMXHFHHDC-WNCIHKCYXRR 73
           WIP+  S + C    + +  F H C W  IHKC  R+
Sbjct: 547 WIPKTSSSHHCSQCDKCVDGFDHHCPW--IHKCVYRK 581


>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
            protein W05F2.7 protein.
          Length = 1424

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
 Frame = +1

Query: 73   PAXVALMDTVPTVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPTXR--DGSVSS 246
            P    +   +P+ +     PP +  T     T   P  P    +  +APT     GS+ S
Sbjct: 788  PLIFIIPTVIPSTMPTTPEPPTISSTFTPAATQASPATPTPQHVAQSAPTNSIIGGSLDS 847

Query: 247  -TGSPV--TLIQTXTAXXP 294
             T  P+   LI +  A  P
Sbjct: 848  FTNPPIIAALISSSAASPP 866


>Z81585-4|CAB04687.1|  345|Caenorhabditis elegans Hypothetical
           protein T05E12.4 protein.
          Length = 345

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -1

Query: 192 HRMYWIPRCLSLNQCYWNCRWMXHFHHDCWNCI 94
           +R+ W+P  L  N       W  +   DC++C+
Sbjct: 165 YRIKWLPSILFYNNSKSKPEWQHYVLVDCFSCV 197


>Z81455-6|CAN86597.1|  695|Caenorhabditis elegans Hypothetical
           protein B0399.1f protein.
          Length = 695

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = +1

Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255
           +PTV+  +  PP     L  +Q+ R+P  V        D  P    GS SST +
Sbjct: 602 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 655


>Z81455-5|CAJ90505.1|  611|Caenorhabditis elegans Hypothetical
           protein B0399.1e protein.
          Length = 611

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = +1

Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255
           +PTV+  +  PP     L  +Q+ R+P  V        D  P    GS SST +
Sbjct: 518 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 571


>Z81455-4|CAJ76928.1|  680|Caenorhabditis elegans Hypothetical
           protein B0399.1d protein.
          Length = 680

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = +1

Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255
           +PTV+  +  PP     L  +Q+ R+P  V        D  P    GS SST +
Sbjct: 587 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 640


>Z81455-2|CAD54123.1|  745|Caenorhabditis elegans Hypothetical
           protein B0399.1b protein.
          Length = 745

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = +1

Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255
           +PTV+  +  PP     L  +Q+ R+P  V        D  P    GS SST +
Sbjct: 652 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 705


>Z81455-1|CAB03807.2|  792|Caenorhabditis elegans Hypothetical
           protein B0399.1a protein.
          Length = 792

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = +1

Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255
           +PTV+  +  PP     L  +Q+ R+P  V        D  P    GS SST +
Sbjct: 699 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 752


>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
            x-hybridizingprotein 1, isoform b protein.
          Length = 1169

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -1

Query: 288  PRCXSLNQCYWTAGG*YT-SITXCWSCIHK 202
            P C   + CY T+GG  T     C SC H+
Sbjct: 1108 PNCPPRSYCYITSGGFATEEYNCCKSCSHR 1137


>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
            x-hybridizingprotein 1, isoform a protein.
          Length = 1876

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -1

Query: 288  PRCXSLNQCYWTAGG*YT-SITXCWSCIHK 202
            P C   + CY T+GG  T     C SC H+
Sbjct: 1205 PNCPPRSYCYITSGGFATEEYNCCKSCSHR 1234


>AL032637-27|CAN86620.1|  695|Caenorhabditis elegans Hypothetical
           protein B0399.1f protein.
          Length = 695

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = +1

Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255
           +PTV+  +  PP     L  +Q+ R+P  V        D  P    GS SST +
Sbjct: 602 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 655


>AL032637-26|CAJ90512.1|  611|Caenorhabditis elegans Hypothetical
           protein B0399.1e protein.
          Length = 611

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = +1

Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255
           +PTV+  +  PP     L  +Q+ R+P  V        D  P    GS SST +
Sbjct: 518 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 571


>AL032637-25|CAJ76956.1|  680|Caenorhabditis elegans Hypothetical
           protein B0399.1d protein.
          Length = 680

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = +1

Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255
           +PTV+  +  PP     L  +Q+ R+P  V        D  P    GS SST +
Sbjct: 587 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 640


>AL032637-24|CAD54171.1|  745|Caenorhabditis elegans Hypothetical
           protein B0399.1b protein.
          Length = 745

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = +1

Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255
           +PTV+  +  PP     L  +Q+ R+P  V        D  P    GS SST +
Sbjct: 652 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 705


>AL032637-23|CAA21625.2|  792|Caenorhabditis elegans Hypothetical
           protein B0399.1a protein.
          Length = 792

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = +1

Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255
           +PTV+  +  PP     L  +Q+ R+P  V        D  P    GS SST +
Sbjct: 699 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 752


>AL032637-1|CAD54169.1|  555|Caenorhabditis elegans Hypothetical
           protein B0399.1c protein.
          Length = 555

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = +1

Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255
           +PTV+  +  PP     L  +Q+ R+P  V        D  P    GS SST +
Sbjct: 462 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 515


>AL032626-23|CAE17974.1|   88|Caenorhabditis elegans Hypothetical
           protein Y37D8A.26 protein.
          Length = 88

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 150 CYWNCRWMXHFHHDCWNC 97
           C+W CR     HH C NC
Sbjct: 62  CFW-CRCFMDVHHRCPNC 78


>Z22179-5|CAA80162.2|  786|Caenorhabditis elegans Hypothetical
           protein F58A4.5 protein.
          Length = 786

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +1

Query: 106 TVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPT 222
           T ++    P A+P+ ++  Q+ +DP  P      +T  T
Sbjct: 523 TTIITTVKPNALPIAIVAKQSEKDPACPAEWTQFNTNAT 561


>AF016432-7|AAB65382.1|  342|Caenorhabditis elegans Seven tm
           receptor protein 226 protein.
          Length = 342

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 189 RMYWIPRCLSLNQCYWNC 136
           +++  P  L LN CYW C
Sbjct: 84  KLFGPPGLLILNSCYWGC 101


>AC006633-6|AAK68378.4|  578|Caenorhabditis elegans Hypothetical
           protein F35B3.7 protein.
          Length = 578

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 16/68 (23%), Positives = 26/68 (38%)
 Frame = +1

Query: 64  LVHPAXVALMDTVPTVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPTXRDGSVS 243
           ++      L DT+   + E  H  + P  +    T    +    A L  T P  RD S  
Sbjct: 178 MIEEIFAPLRDTIKEGIEEARHLSSSPEKIKINHTPSTRLEQWKAQLNSTTPRIRDSSAP 237

Query: 244 STGSPVTL 267
           +T   +T+
Sbjct: 238 ATVQRLTI 245


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,589,701
Number of Sequences: 27780
Number of extensions: 92167
Number of successful extensions: 350
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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