BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0362.Seq (339 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 36 0.006 U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 32 0.091 AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 31 0.28 U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 1.1 U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 28 1.5 AF125443-1|AAD12801.1| 783|Caenorhabditis elegans Hypothetical ... 28 1.5 AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 28 2.0 Z81585-4|CAB04687.1| 345|Caenorhabditis elegans Hypothetical pr... 27 4.5 Z81455-6|CAN86597.1| 695|Caenorhabditis elegans Hypothetical pr... 27 4.5 Z81455-5|CAJ90505.1| 611|Caenorhabditis elegans Hypothetical pr... 27 4.5 Z81455-4|CAJ76928.1| 680|Caenorhabditis elegans Hypothetical pr... 27 4.5 Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical pr... 27 4.5 Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical pr... 27 4.5 U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 27 4.5 U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 27 4.5 AL032637-27|CAN86620.1| 695|Caenorhabditis elegans Hypothetical... 27 4.5 AL032637-26|CAJ90512.1| 611|Caenorhabditis elegans Hypothetical... 27 4.5 AL032637-25|CAJ76956.1| 680|Caenorhabditis elegans Hypothetical... 27 4.5 AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical... 27 4.5 AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical... 27 4.5 AL032637-1|CAD54169.1| 555|Caenorhabditis elegans Hypothetical ... 27 4.5 AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical... 26 6.0 Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical pr... 26 7.9 AF016432-7|AAB65382.1| 342|Caenorhabditis elegans Seven tm rece... 26 7.9 AC006633-6|AAK68378.4| 578|Caenorhabditis elegans Hypothetical ... 26 7.9 >U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical protein C12D12.1b protein. Length = 648 Score = 36.3 bits (80), Expect = 0.006 Identities = 29/112 (25%), Positives = 37/112 (33%), Gaps = 2/112 (1%) Frame = +1 Query: 7 VYXPPAVPAQLMQAQTA*DLVHPAXVALMDTVPTVVMEVXH-PPAVPVTLIQTQTARDPV 183 V PP P T + P + T PT V + PPA P T T Sbjct: 458 VLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTIGT 517 Query: 184 HPVVAALMDTAPTXRDGSVSSTGSPVTLIQ-TXTAXXPVHXAVASLMDTVST 336 P A + T T SST +P + T P V + T +T Sbjct: 518 SPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTT 569 Score = 27.1 bits (57), Expect = 3.4 Identities = 28/109 (25%), Positives = 34/109 (31%), Gaps = 3/109 (2%) Frame = +1 Query: 19 PAVPAQLMQAQTA*DLVHPAXVALMDTVPTVVMEVXHPPAVP---VTLIQTQTARDPVHP 189 P PA L TA V+P T P P VP T T T+ Sbjct: 519 PTAPANLTTPTTA--PVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTT 576 Query: 190 VVAALMDTAPTXRDGSVSSTGSPVTLIQTXTAXXPVHXAVASLMDTVST 336 T PT + ST +P T T A P + T+ T Sbjct: 577 TTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTIPT 625 >U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical protein C12D12.1a protein. Length = 769 Score = 32.3 bits (70), Expect = 0.091 Identities = 24/87 (27%), Positives = 30/87 (34%), Gaps = 1/87 (1%) Frame = +1 Query: 7 VYXPPAVPAQLMQAQTA*DLVHPAXVALMDTVPTVVMEVXH-PPAVPVTLIQTQTARDPV 183 V PP P T + P + T PT V + PPA P T T T + Sbjct: 458 VLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTT--ATPTTVGTM 515 Query: 184 HPVVAALMDTAPTXRDGSVSSTGSPVT 264 P PT + T +PVT Sbjct: 516 TPSTGTTTVPVPTTTGSPTTQTTAPVT 542 Score = 27.1 bits (57), Expect = 3.4 Identities = 28/109 (25%), Positives = 34/109 (31%), Gaps = 3/109 (2%) Frame = +1 Query: 19 PAVPAQLMQAQTA*DLVHPAXVALMDTVPTVVMEVXHPPAVP---VTLIQTQTARDPVHP 189 P PA L TA V+P T P P VP T T T+ Sbjct: 640 PTAPANLTTPTTA--PVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTT 697 Query: 190 VVAALMDTAPTXRDGSVSSTGSPVTLIQTXTAXXPVHXAVASLMDTVST 336 T PT + ST +P T T A P + T+ T Sbjct: 698 TTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTIPT 746 >AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical protein Y46C8AL.2 protein. Length = 456 Score = 30.7 bits (66), Expect = 0.28 Identities = 17/62 (27%), Positives = 24/62 (38%) Frame = +1 Query: 97 TVPTVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPTXRDGSVSSTGSPVTLIQT 276 T PT + P P T+ T T P P T PT + ++ +P T+ T Sbjct: 251 TTPTTMKSTPTTPTTPTTMKSTPTT--PTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKST 308 Query: 277 XT 282 T Sbjct: 309 PT 310 Score = 30.7 bits (66), Expect = 0.28 Identities = 17/62 (27%), Positives = 24/62 (38%) Frame = +1 Query: 97 TVPTVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPTXRDGSVSSTGSPVTLIQT 276 T PT + P P T+ T T P P T PT + ++ +P T+ T Sbjct: 365 TTPTTMKSTPTTPTTPTTMKSTPTT--PTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKST 422 Query: 277 XT 282 T Sbjct: 423 PT 424 Score = 28.3 bits (60), Expect = 1.5 Identities = 17/64 (26%), Positives = 22/64 (34%) Frame = +1 Query: 73 PAXVALMDTVPTVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPTXRDGSVSSTG 252 P + T PT + P P T+ T T P P T PT S+ Sbjct: 165 PTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTT--PTTPTTMKSTPTTPTTPTTMKSTPT 222 Query: 253 SPVT 264 +P T Sbjct: 223 TPTT 226 Score = 27.5 bits (58), Expect = 2.6 Identities = 17/64 (26%), Positives = 22/64 (34%) Frame = +1 Query: 73 PAXVALMDTVPTVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPTXRDGSVSSTG 252 P + T PT + P P T+ T T P P T PT S+ Sbjct: 279 PTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTT--PTTPTTMKSTPTTPTTPTTMKSTPT 336 Query: 253 SPVT 264 +P T Sbjct: 337 TPTT 340 >U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical protein C12D12.1c protein. Length = 825 Score = 28.7 bits (61), Expect = 1.1 Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 9/105 (8%) Frame = +1 Query: 7 VYXPPAVPAQLMQAQTA*DLVHPAXVALMDTVPTVVMEVXH-PPAVPVTLI--------Q 159 V PP P T + P + T PT V + PPA P T Q Sbjct: 458 VLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTSKQ 517 Query: 160 TQTARDPVHPVVAALMDTAPTXRDGSVSSTGSPVTLIQTXTAXXP 294 T T + + +++ + PT + ++ SP T TA P Sbjct: 518 TNTISPHLSTITGSIVTSTPTM---APQTSASPTTTPTHTTASQP 559 Score = 27.1 bits (57), Expect = 3.4 Identities = 28/109 (25%), Positives = 34/109 (31%), Gaps = 3/109 (2%) Frame = +1 Query: 19 PAVPAQLMQAQTA*DLVHPAXVALMDTVPTVVMEVXHPPAVP---VTLIQTQTARDPVHP 189 P PA L TA V+P T P P VP T T T+ Sbjct: 696 PTAPANLTTPTTA--PVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTT 753 Query: 190 VVAALMDTAPTXRDGSVSSTGSPVTLIQTXTAXXPVHXAVASLMDTVST 336 T PT + ST +P T T A P + T+ T Sbjct: 754 TTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTIPT 802 >U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein F40H6.5 protein. Length = 1288 Score = 28.3 bits (60), Expect = 1.5 Identities = 15/50 (30%), Positives = 19/50 (38%) Frame = +1 Query: 97 TVPTVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPTXRDGSVSS 246 T+ TV M PP P T T T P + L T+ VS+ Sbjct: 1141 TIDTVSMACVRPPTTPTTTTSTTTTTTPKLTTTSTLPSTSTAIATTDVST 1190 >AF125443-1|AAD12801.1| 783|Caenorhabditis elegans Hypothetical protein H32C10.3 protein. Length = 783 Score = 28.3 bits (60), Expect = 1.5 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = -1 Query: 180 WIPRCLSLNQCYWNCRWMXHFHHDC-WNCIHKCYXRR 73 WIP+ S + C + + F H C W IHKC R+ Sbjct: 547 WIPKTSSSHHCSQCDKCVDGFDHHCPW--IHKCVYRK 581 >AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical protein W05F2.7 protein. Length = 1424 Score = 27.9 bits (59), Expect = 2.0 Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 5/79 (6%) Frame = +1 Query: 73 PAXVALMDTVPTVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPTXR--DGSVSS 246 P + +P+ + PP + T T P P + +APT GS+ S Sbjct: 788 PLIFIIPTVIPSTMPTTPEPPTISSTFTPAATQASPATPTPQHVAQSAPTNSIIGGSLDS 847 Query: 247 -TGSPV--TLIQTXTAXXP 294 T P+ LI + A P Sbjct: 848 FTNPPIIAALISSSAASPP 866 >Z81585-4|CAB04687.1| 345|Caenorhabditis elegans Hypothetical protein T05E12.4 protein. Length = 345 Score = 26.6 bits (56), Expect = 4.5 Identities = 9/33 (27%), Positives = 16/33 (48%) Frame = -1 Query: 192 HRMYWIPRCLSLNQCYWNCRWMXHFHHDCWNCI 94 +R+ W+P L N W + DC++C+ Sbjct: 165 YRIKWLPSILFYNNSKSKPEWQHYVLVDCFSCV 197 >Z81455-6|CAN86597.1| 695|Caenorhabditis elegans Hypothetical protein B0399.1f protein. Length = 695 Score = 26.6 bits (56), Expect = 4.5 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +1 Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255 +PTV+ + PP L +Q+ R+P V D P GS SST + Sbjct: 602 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 655 >Z81455-5|CAJ90505.1| 611|Caenorhabditis elegans Hypothetical protein B0399.1e protein. Length = 611 Score = 26.6 bits (56), Expect = 4.5 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +1 Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255 +PTV+ + PP L +Q+ R+P V D P GS SST + Sbjct: 518 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 571 >Z81455-4|CAJ76928.1| 680|Caenorhabditis elegans Hypothetical protein B0399.1d protein. Length = 680 Score = 26.6 bits (56), Expect = 4.5 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +1 Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255 +PTV+ + PP L +Q+ R+P V D P GS SST + Sbjct: 587 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 640 >Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical protein B0399.1b protein. Length = 745 Score = 26.6 bits (56), Expect = 4.5 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +1 Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255 +PTV+ + PP L +Q+ R+P V D P GS SST + Sbjct: 652 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 705 >Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical protein B0399.1a protein. Length = 792 Score = 26.6 bits (56), Expect = 4.5 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +1 Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255 +PTV+ + PP L +Q+ R+P V D P GS SST + Sbjct: 699 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 752 >U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1 x-hybridizingprotein 1, isoform b protein. Length = 1169 Score = 26.6 bits (56), Expect = 4.5 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%) Frame = -1 Query: 288 PRCXSLNQCYWTAGG*YT-SITXCWSCIHK 202 P C + CY T+GG T C SC H+ Sbjct: 1108 PNCPPRSYCYITSGGFATEEYNCCKSCSHR 1137 >U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1 x-hybridizingprotein 1, isoform a protein. Length = 1876 Score = 26.6 bits (56), Expect = 4.5 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%) Frame = -1 Query: 288 PRCXSLNQCYWTAGG*YT-SITXCWSCIHK 202 P C + CY T+GG T C SC H+ Sbjct: 1205 PNCPPRSYCYITSGGFATEEYNCCKSCSHR 1234 >AL032637-27|CAN86620.1| 695|Caenorhabditis elegans Hypothetical protein B0399.1f protein. Length = 695 Score = 26.6 bits (56), Expect = 4.5 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +1 Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255 +PTV+ + PP L +Q+ R+P V D P GS SST + Sbjct: 602 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 655 >AL032637-26|CAJ90512.1| 611|Caenorhabditis elegans Hypothetical protein B0399.1e protein. Length = 611 Score = 26.6 bits (56), Expect = 4.5 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +1 Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255 +PTV+ + PP L +Q+ R+P V D P GS SST + Sbjct: 518 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 571 >AL032637-25|CAJ76956.1| 680|Caenorhabditis elegans Hypothetical protein B0399.1d protein. Length = 680 Score = 26.6 bits (56), Expect = 4.5 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +1 Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255 +PTV+ + PP L +Q+ R+P V D P GS SST + Sbjct: 587 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 640 >AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical protein B0399.1b protein. Length = 745 Score = 26.6 bits (56), Expect = 4.5 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +1 Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255 +PTV+ + PP L +Q+ R+P V D P GS SST + Sbjct: 652 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 705 >AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical protein B0399.1a protein. Length = 792 Score = 26.6 bits (56), Expect = 4.5 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +1 Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255 +PTV+ + PP L +Q+ R+P V D P GS SST + Sbjct: 699 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 752 >AL032637-1|CAD54169.1| 555|Caenorhabditis elegans Hypothetical protein B0399.1c protein. Length = 555 Score = 26.6 bits (56), Expect = 4.5 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +1 Query: 100 VPTVVMEVXHPPAVPVTLIQTQTARDP--VHPVVAALMDTAPTXRDGSVSSTGS 255 +PTV+ + PP L +Q+ R+P V D P GS SST + Sbjct: 462 LPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTTSSDGLPRISVGSTSSTAT 515 >AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical protein Y37D8A.26 protein. Length = 88 Score = 26.2 bits (55), Expect = 6.0 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = -1 Query: 150 CYWNCRWMXHFHHDCWNC 97 C+W CR HH C NC Sbjct: 62 CFW-CRCFMDVHHRCPNC 78 >Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical protein F58A4.5 protein. Length = 786 Score = 25.8 bits (54), Expect = 7.9 Identities = 10/39 (25%), Positives = 19/39 (48%) Frame = +1 Query: 106 TVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPT 222 T ++ P A+P+ ++ Q+ +DP P +T T Sbjct: 523 TTIITTVKPNALPIAIVAKQSEKDPACPAEWTQFNTNAT 561 >AF016432-7|AAB65382.1| 342|Caenorhabditis elegans Seven tm receptor protein 226 protein. Length = 342 Score = 25.8 bits (54), Expect = 7.9 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = -1 Query: 189 RMYWIPRCLSLNQCYWNC 136 +++ P L LN CYW C Sbjct: 84 KLFGPPGLLILNSCYWGC 101 >AC006633-6|AAK68378.4| 578|Caenorhabditis elegans Hypothetical protein F35B3.7 protein. Length = 578 Score = 25.8 bits (54), Expect = 7.9 Identities = 16/68 (23%), Positives = 26/68 (38%) Frame = +1 Query: 64 LVHPAXVALMDTVPTVVMEVXHPPAVPVTLIQTQTARDPVHPVVAALMDTAPTXRDGSVS 243 ++ L DT+ + E H + P + T + A L T P RD S Sbjct: 178 MIEEIFAPLRDTIKEGIEEARHLSSSPEKIKINHTPSTRLEQWKAQLNSTTPRIRDSSAP 237 Query: 244 STGSPVTL 267 +T +T+ Sbjct: 238 ATVQRLTI 245 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 5,589,701 Number of Sequences: 27780 Number of extensions: 92167 Number of successful extensions: 350 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 314 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 348 length of database: 12,740,198 effective HSP length: 72 effective length of database: 10,740,038 effective search space used: 429601520 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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