BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0360.Seq (459 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_05_0865 - 28365430-28367640 73 1e-13 07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 49 2e-06 06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 48 3e-06 03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 46 1e-05 01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 46 1e-05 06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 46 1e-05 02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 46 1e-05 07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 46 2e-05 01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 43 1e-04 01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 43 1e-04 02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 42 2e-04 08_01_0397 - 3509186-3510291,3510322-3512335 41 4e-04 08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 40 7e-04 01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 40 7e-04 11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 40 0.001 07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 38 0.003 03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 36 0.016 12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 35 0.027 08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 35 0.036 07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 34 0.063 07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 34 0.063 12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 33 0.11 07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 32 0.19 03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 32 0.19 01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 30 0.78 04_03_0658 + 18447986-18448117,18448204-18448317,18448388-184485... 27 5.5 02_03_0062 + 14586152-14586461,14586792-14587075,14587807-14588079 27 7.3 01_02_0116 - 11252220-11253313,11253398-11253559,11253977-112543... 27 7.3 05_03_0062 - 7917596-7918129,7918279-7918447,7919007-7919182,791... 27 9.6 >03_05_0865 - 28365430-28367640 Length = 736 Score = 72.9 bits (171), Expect = 1e-13 Identities = 37/75 (49%), Positives = 48/75 (64%) Frame = -3 Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVLLASSVSTC 278 DV+ VI Y M +I+ THRIG TG AGK G A SF+T E++ +F+DLKQ+L+ S+ S Sbjct: 646 DVAHVINYEMPSSIDTYTHRIGRTGRAGKKGLATSFLTLENTDIFFDLKQMLIQSN-SPV 704 Query: 277 PPELMNHPRLNISQG 233 PPEL H G Sbjct: 705 PPELARHEASKFKPG 719 >07_02_0023 - 11918735-11918827,11919139-11919231,11919320-11919484, 11920234-11920327,11921012-11921136,11921228-11921313, 11921786-11921864,11923777-11923857,11924153-11924260, 11924870-11924994,11925110-11925530 Length = 489 Score = 48.8 bits (111), Expect = 2e-06 Identities = 28/64 (43%), Positives = 34/64 (53%) Frame = -3 Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVLLASSVSTC 278 DV +VI Y T E HRIG TG AGK G A +F T+E+ L +L VL + Sbjct: 387 DVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKGLAGELVNVLREAG-QVV 445 Query: 277 PPEL 266 PP L Sbjct: 446 PPAL 449 >06_03_0674 + 23422004-23422552,23423295-23423369,23424360-23424443, 23424749-23424991,23425348-23425515,23425608-23425727, 23426372-23427016 Length = 627 Score = 48.4 bits (110), Expect = 3e-06 Identities = 23/52 (44%), Positives = 33/52 (63%) Frame = -3 Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVL 302 +V+ VI Y + K+IE HRIG TG AGK G A +F T+ D +L L +++ Sbjct: 444 NVAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDHSLAKGLLELM 495 >03_05_0052 - 20293197-20293310,20293938-20294024,20294133-20294270, 20295009-20295128,20295236-20295343,20296053-20296133, 20296216-20296456,20297010-20297305 Length = 394 Score = 46.4 bits (105), Expect = 1e-05 Identities = 22/50 (44%), Positives = 31/50 (62%) Frame = -3 Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQ 308 DVS+VI Y + E HRIG +G G+ G A++FV KED + D++Q Sbjct: 328 DVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILRDIEQ 377 >01_06_0020 + 25630728-25631023,25631308-25631548,25631629-25631709, 25632109-25632216,25632329-25632448,25632806-25632943, 25633064-25633150,25633802-25633915 Length = 394 Score = 46.4 bits (105), Expect = 1e-05 Identities = 22/50 (44%), Positives = 31/50 (62%) Frame = -3 Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQ 308 DVS+VI Y + E HRIG +G G+ G A++FV KED + D++Q Sbjct: 328 DVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILRDIEQ 377 >06_03_1284 - 28988287-28988922,28989335-28989765,28989850-28989956, 28990066-28990136 Length = 414 Score = 46.0 bits (104), Expect = 1e-05 Identities = 19/49 (38%), Positives = 32/49 (65%) Frame = -3 Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQ 308 VS+VI Y + E HRIG +G G+ G A++FVT++D + +D+++ Sbjct: 349 VSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQR 397 >02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615, 2560100-2560735 Length = 414 Score = 46.0 bits (104), Expect = 1e-05 Identities = 19/49 (38%), Positives = 32/49 (65%) Frame = -3 Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQ 308 VS+VI Y + E HRIG +G G+ G A++FVT++D + +D+++ Sbjct: 349 VSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQR 397 >07_03_1500 + 27001842-27002058,27002144-27002283,27002458-27002549, 27002680-27002776,27002871-27002951,27003031-27003263, 27003876-27004070,27004149-27004239,27004324-27004446, 27004542-27004692,27005060-27005262 Length = 540 Score = 45.6 bits (103), Expect = 2e-05 Identities = 20/54 (37%), Positives = 33/54 (61%) Frame = -3 Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVLLAS 293 V+ VI Y ++ HRIG +G AG+ G+A++F T+ED ++ VL++S Sbjct: 454 VNCVINYDFPESASAYIHRIGRSGRAGRSGEAITFFTEEDKPFLRNIANVLISS 507 >01_05_0292 + 20518668-20519090,20519213-20519281,20520204-20520473, 20520734-20521084,20521251-20521528,20522755-20523099, 20523346-20523911,20525155-20525528 Length = 891 Score = 43.2 bits (97), Expect = 1e-04 Identities = 22/52 (42%), Positives = 28/52 (53%) Frame = -3 Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVL 302 D+ +VI Y IE HRIG TG AG G A +F +DS DL ++L Sbjct: 462 DIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAADLIKIL 513 >01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015, 3714088-3714438,3714585-3714862,3714939-3715289, 3715378-3715647,3716035-3716103,3716194-3716304, 3716503-3716583,3716825-3716914,3717032-3717262 Length = 689 Score = 43.2 bits (97), Expect = 1e-04 Identities = 21/58 (36%), Positives = 31/58 (53%) Frame = -3 Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVLLASSVS 284 D+ +V+ Y +E HRIG TG AG G A +F +DS DL ++L ++ S Sbjct: 492 DIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLVKILEGANQS 549 >02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390, 5698015-5698057 Length = 608 Score = 42.3 bits (95), Expect = 2e-04 Identities = 23/65 (35%), Positives = 34/65 (52%) Frame = -3 Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVLLASSVSTCP 275 V VI + M +I+ H++G G G A+ FV +ED LF +L Q+L + + P Sbjct: 498 VRQVILFDMPNSIDEYVHQVGRASRMGVEGMAIVFVNEEDRNLFRELVQILKTAG-APIP 556 Query: 274 PELMN 260 EL N Sbjct: 557 RELAN 561 >08_01_0397 - 3509186-3510291,3510322-3512335 Length = 1039 Score = 41.1 bits (92), Expect = 4e-04 Identities = 17/52 (32%), Positives = 31/52 (59%) Frame = -3 Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVL 302 ++ +V+ Y + E HR+G TG AG+ G A++F+++E+ DL + L Sbjct: 729 ELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISEEEERYAPDLVKAL 780 >08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164, 3109210-3110952 Length = 947 Score = 40.3 bits (90), Expect = 7e-04 Identities = 17/52 (32%), Positives = 30/52 (57%) Frame = -3 Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVL 302 ++ +V+ Y + E HR+G TG AG+ G A++F++ E+ DL + L Sbjct: 581 NLELVVNYDVPNHYEDYVHRVGRTGHAGRKGFAVTFISDEEERYAPDLAKAL 632 >01_06_1758 - 39681942-39682030,39682115-39682345,39682643-39682679, 39683604-39683835,39683937-39684022,39684126-39684218, 39684302-39684465,39684541-39684702,39684783-39684962, 39685079-39685515,39685614-39685669 Length = 588 Score = 40.3 bits (90), Expect = 7e-04 Identities = 19/52 (36%), Positives = 28/52 (53%) Frame = -3 Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVL 302 D+ VI + T+E HRIG TG AG G A +F T ++ +L ++L Sbjct: 486 DIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFSRNLVKIL 537 >11_06_0300 + 22095396-22096145,22096261-22096344,22097062-22097304, 22098535-22098702,22098895-22099008,22099378-22099890 Length = 623 Score = 39.9 bits (89), Expect = 0.001 Identities = 18/55 (32%), Positives = 32/55 (58%) Frame = -3 Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVLLASS 290 V+ V+ + + I+ HRIG TG AGK G A +F + +S++ L +++ S+ Sbjct: 485 VAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSMARSLAELMQESN 539 >07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398, 5534564-5534731,5535951-5536193,5537178-5537261, 5537357-5538117,5539637-5539730,5540633-5540899, 5541311-5541316,5542538-5542657 Length = 801 Score = 38.3 bits (85), Expect = 0.003 Identities = 18/51 (35%), Positives = 29/51 (56%) Frame = -3 Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVL 302 V+ VI + + I+ HRIG TG AGK G A +F + ++ L L +++ Sbjct: 660 VAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESNTPLARPLSELM 710 >03_06_0365 - 33399422-33399925,33400470-33400583,33400762-33400929, 33401305-33401547,33402148-33402231,33402323-33403098, 33404423-33404636 Length = 700 Score = 35.9 bits (79), Expect = 0.016 Identities = 18/51 (35%), Positives = 29/51 (56%) Frame = -3 Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVL 302 V+ VI + + I+ HRIG TG AGK G A +F + + +L L +++ Sbjct: 565 VAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEGNLSLARPLCELM 615 >12_02_0340 - 17725866-17725884,17726046-17726326,17726842-17726928, 17727018-17727113,17728484-17728585,17728720-17728762, 17728834-17728952,17729348-17729444,17730153-17730214, 17730370-17730432,17730847-17730949,17731402-17731497, 17731594-17731742,17732356-17732529,17733078-17733156, 17733807-17733913,17733994-17734062,17734879-17735043, 17735206-17735703 Length = 802 Score = 35.1 bits (77), Expect = 0.027 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -3 Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSAL 326 V VI + + HR+G T AG+ G A++FVT +D +L Sbjct: 508 VRTVINFSCPRDARTYLHRVGRTARAGREGYAVTFVTDDDRSL 550 >08_02_0671 - 19890187-19890295,19891186-19891320,19891551-19891917, 19892909-19893044,19894924-19894974,19895053-19895134, 19895801-19895853,19895989-19896065,19896234-19896273, 19897666-19897767,19897989-19898031,19898127-19899288, 19899902-19900271 Length = 908 Score = 34.7 bits (76), Expect = 0.036 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -3 Query: 403 HRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPE 269 HR+G G+ G A +FVT ED A DL + L+ + P E Sbjct: 355 HRVGRVARQGRSGTAYTFVTSEDMAYLLDL-HLFLSKPLRPAPTE 398 >07_03_1392 - 26238885-26239007,26239137-26239235,26239636-26239720, 26239825-26240028,26240360-26240682,26241904-26242575 Length = 501 Score = 33.9 bits (74), Expect = 0.063 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Frame = -3 Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFV-TKEDSALFYDLKQVL 302 V +VI Y + + HR+G T A + G ++SF+ T+ D L ++++ V+ Sbjct: 390 VDLVINYDVPRYPRDYIHRVGRTARATRGGLSISFITTQRDIRLLHEIEDVV 441 >07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159, 2259196-2259294,2259723-2260131,2260223-2260350, 2261115-2261181,2262766-2262838,2262911-2263130 Length = 624 Score = 33.9 bits (74), Expect = 0.063 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -3 Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDS 332 +V +VI Y + T E HR G T AGK G A+ T + + Sbjct: 417 NVDLVIHYELPNTSELFVHRSGRTARAGKKGSAILIYTNDQA 458 >12_02_1076 - 25862671-25863159,25863290-25863451,25863614-25863838, 25863939-25864037,25864584-25864992,25865094-25865221, 25865955-25866329 Length = 628 Score = 33.1 bits (72), Expect = 0.11 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = -3 Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAM 356 +V +VI + + + E HR G TG AGK GKA+ Sbjct: 409 NVDLVIHFELPNSSELFVHRSGRTGRAGKKGKAI 442 >07_03_0601 - 19872780-19873099,19873148-19873151,19874196-19874357, 19874429-19874617,19874687-19875010,19875103-19875378, 19875436-19875478,19876110-19876188,19876473-19876555, 19876708-19876782,19877324-19877490,19877960-19878370 Length = 710 Score = 32.3 bits (70), Expect = 0.19 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = -3 Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLK 311 DV V+ + I HR+G T K GKA+ F+ E+ + LK Sbjct: 543 DVDWVVQVDCPENIALYIHRVGRTARYNKRGKALIFLCPEEEKMLEKLK 591 >03_06_0531 + 34552206-34552598,34552665-34552735,34553363-34553369, 34553603-34553736,34553834-34554245,34554655-34554753, 34555059-34555283,34555652-34556029,34556412-34556555, 34556832-34556927,34557228-34557547,34557965-34558040 Length = 784 Score = 32.3 bits (70), Expect = 0.19 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -3 Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVT 344 +V ++I Y + E HR G TG AGK G A+ T Sbjct: 444 NVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFT 481 >01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237, 4486636-4486778,4486819-4486877,4487167-4487200, 4487489-4487629,4487719-4487907,4488027-4488122, 4488163-4488225,4488588-4489097 Length = 630 Score = 30.3 bits (65), Expect = 0.78 Identities = 16/52 (30%), Positives = 22/52 (42%) Frame = -3 Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVL 302 DV VI + HR G T G GK S V K+D L +++ + Sbjct: 442 DVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVAKKDVTLATRIEEAM 493 >04_03_0658 + 18447986-18448117,18448204-18448317,18448388-18448507, 18448589-18449215,18449289-18449462,18449545-18449809, 18449889-18449959,18450043-18450145,18450221-18450280, 18450533-18450744,18450830-18450901,18451446-18451502, 18451598-18451882,18452359-18452371,18452396-18452463, 18452649-18452747,18452836-18452967,18453038-18453141, 18453234-18453423,18453519-18453524 Length = 967 Score = 27.5 bits (58), Expect = 5.5 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 Query: 285 DTELANKTCFRS*NNAESSFVTKDIA 362 D E+ +TCF+S N +SSFV A Sbjct: 155 DKEVIGRTCFKSLLNFQSSFVPNQFA 180 >02_03_0062 + 14586152-14586461,14586792-14587075,14587807-14588079 Length = 288 Score = 27.1 bits (57), Expect = 7.3 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = -2 Query: 329 IVL*SEAGFVGKFR-IYVSTGTNEPPXAQHKPGTVVTK 219 I L ++G + K R ++ G PP A+H GT+ TK Sbjct: 187 ITLRDDSGDIFKARRLFQDDGKAAPPPAEHNVGTLFTK 224 >01_02_0116 - 11252220-11253313,11253398-11253559,11253977-11254306, 11254328-11254377,11255195-11255389,11255532-11255625, 11255713-11255961,11256831-11256892,11257434-11257534, 11257766-11257880,11258384-11258475,11259197-11259333, 11259721-11259760 Length = 906 Score = 27.1 bits (57), Expect = 7.3 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 3/35 (8%) Frame = +3 Query: 138 HDGNLPIAYYFRL*LGLSSEYH---LFTSFLCYDC 233 +D LP+ YF+ G SE H LFTSF+C C Sbjct: 397 NDDILPVLNYFKAYEG--SEPHVATLFTSFICISC 429 >05_03_0062 - 7917596-7918129,7918279-7918447,7919007-7919182, 7919235-7919360,7920196-7920342 Length = 383 Score = 26.6 bits (56), Expect = 9.6 Identities = 14/38 (36%), Positives = 17/38 (44%) Frame = +2 Query: 284 RYGTCQQNLLQIIEQCGVFFCNKGHSFTXFSCTTGXAD 397 R C QN+L + E+C NK S FS T D Sbjct: 95 RSAECLQNVLSLYERCSGQTINKEKSSVMFSMNTKEND 132 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,663,756 Number of Sequences: 37544 Number of extensions: 159542 Number of successful extensions: 348 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 339 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 348 length of database: 14,793,348 effective HSP length: 76 effective length of database: 11,940,004 effective search space used: 907440304 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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