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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0360.Seq
         (459 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0865 - 28365430-28367640                                         73   1e-13
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194...    49   2e-06
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244...    48   3e-06
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942...    46   1e-05
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317...    46   1e-05
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899...    46   1e-05
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256...    46   1e-05
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025...    46   2e-05
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204...    43   1e-04
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371...    43   1e-04
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569...    42   2e-04
08_01_0397 - 3509186-3510291,3510322-3512335                           41   4e-04
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310...    40   7e-04
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826...    40   7e-04
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973...    40   0.001
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553...    38   0.003
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009...    36   0.016
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269...    35   0.027
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919...    35   0.036
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397...    34   0.063
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225...    34   0.063
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638...    33   0.11 
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743...    32   0.19 
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533...    32   0.19 
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448...    30   0.78 
04_03_0658 + 18447986-18448117,18448204-18448317,18448388-184485...    27   5.5  
02_03_0062 + 14586152-14586461,14586792-14587075,14587807-14588079     27   7.3  
01_02_0116 - 11252220-11253313,11253398-11253559,11253977-112543...    27   7.3  
05_03_0062 - 7917596-7918129,7918279-7918447,7919007-7919182,791...    27   9.6  

>03_05_0865 - 28365430-28367640
          Length = 736

 Score = 72.9 bits (171), Expect = 1e-13
 Identities = 37/75 (49%), Positives = 48/75 (64%)
 Frame = -3

Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVLLASSVSTC 278
           DV+ VI Y M  +I+  THRIG TG AGK G A SF+T E++ +F+DLKQ+L+ S+ S  
Sbjct: 646 DVAHVINYEMPSSIDTYTHRIGRTGRAGKKGLATSFLTLENTDIFFDLKQMLIQSN-SPV 704

Query: 277 PPELMNHPRLNISQG 233
           PPEL  H       G
Sbjct: 705 PPELARHEASKFKPG 719


>07_02_0023 -
           11918735-11918827,11919139-11919231,11919320-11919484,
           11920234-11920327,11921012-11921136,11921228-11921313,
           11921786-11921864,11923777-11923857,11924153-11924260,
           11924870-11924994,11925110-11925530
          Length = 489

 Score = 48.8 bits (111), Expect = 2e-06
 Identities = 28/64 (43%), Positives = 34/64 (53%)
 Frame = -3

Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVLLASSVSTC 278
           DV +VI Y    T E   HRIG TG AGK G A +F T+E+  L  +L  VL  +     
Sbjct: 387 DVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKGLAGELVNVLREAG-QVV 445

Query: 277 PPEL 266
           PP L
Sbjct: 446 PPAL 449


>06_03_0674 +
           23422004-23422552,23423295-23423369,23424360-23424443,
           23424749-23424991,23425348-23425515,23425608-23425727,
           23426372-23427016
          Length = 627

 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 23/52 (44%), Positives = 33/52 (63%)
 Frame = -3

Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVL 302
           +V+ VI Y + K+IE   HRIG TG AGK G A +F T+ D +L   L +++
Sbjct: 444 NVAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDHSLAKGLLELM 495


>03_05_0052 -
           20293197-20293310,20293938-20294024,20294133-20294270,
           20295009-20295128,20295236-20295343,20296053-20296133,
           20296216-20296456,20297010-20297305
          Length = 394

 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 22/50 (44%), Positives = 31/50 (62%)
 Frame = -3

Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQ 308
           DVS+VI Y +    E   HRIG +G  G+ G A++FV KED  +  D++Q
Sbjct: 328 DVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILRDIEQ 377


>01_06_0020 +
           25630728-25631023,25631308-25631548,25631629-25631709,
           25632109-25632216,25632329-25632448,25632806-25632943,
           25633064-25633150,25633802-25633915
          Length = 394

 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 22/50 (44%), Positives = 31/50 (62%)
 Frame = -3

Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQ 308
           DVS+VI Y +    E   HRIG +G  G+ G A++FV KED  +  D++Q
Sbjct: 328 DVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILRDIEQ 377


>06_03_1284 -
           28988287-28988922,28989335-28989765,28989850-28989956,
           28990066-28990136
          Length = 414

 Score = 46.0 bits (104), Expect = 1e-05
 Identities = 19/49 (38%), Positives = 32/49 (65%)
 Frame = -3

Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQ 308
           VS+VI Y +    E   HRIG +G  G+ G A++FVT++D  + +D+++
Sbjct: 349 VSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQR 397


>02_01_0355 +
           2558792-2558862,2558993-2559099,2559185-2559615,
           2560100-2560735
          Length = 414

 Score = 46.0 bits (104), Expect = 1e-05
 Identities = 19/49 (38%), Positives = 32/49 (65%)
 Frame = -3

Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQ 308
           VS+VI Y +    E   HRIG +G  G+ G A++FVT++D  + +D+++
Sbjct: 349 VSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQR 397


>07_03_1500 +
           27001842-27002058,27002144-27002283,27002458-27002549,
           27002680-27002776,27002871-27002951,27003031-27003263,
           27003876-27004070,27004149-27004239,27004324-27004446,
           27004542-27004692,27005060-27005262
          Length = 540

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 20/54 (37%), Positives = 33/54 (61%)
 Frame = -3

Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVLLAS 293
           V+ VI Y   ++     HRIG +G AG+ G+A++F T+ED     ++  VL++S
Sbjct: 454 VNCVINYDFPESASAYIHRIGRSGRAGRSGEAITFFTEEDKPFLRNIANVLISS 507


>01_05_0292 +
           20518668-20519090,20519213-20519281,20520204-20520473,
           20520734-20521084,20521251-20521528,20522755-20523099,
           20523346-20523911,20525155-20525528
          Length = 891

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 22/52 (42%), Positives = 28/52 (53%)
 Frame = -3

Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVL 302
           D+ +VI Y     IE   HRIG TG AG  G A +F   +DS    DL ++L
Sbjct: 462 DIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAADLIKIL 513


>01_01_0509 -
           3713109-3713244,3713689-3713733,3713959-3714015,
           3714088-3714438,3714585-3714862,3714939-3715289,
           3715378-3715647,3716035-3716103,3716194-3716304,
           3716503-3716583,3716825-3716914,3717032-3717262
          Length = 689

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 21/58 (36%), Positives = 31/58 (53%)
 Frame = -3

Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVLLASSVS 284
           D+ +V+ Y     +E   HRIG TG AG  G A +F   +DS    DL ++L  ++ S
Sbjct: 492 DIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLVKILEGANQS 549


>02_01_0765 -
           5694535-5694644,5695039-5696550,5697229-5697390,
           5698015-5698057
          Length = 608

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 23/65 (35%), Positives = 34/65 (52%)
 Frame = -3

Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVLLASSVSTCP 275
           V  VI + M  +I+   H++G     G  G A+ FV +ED  LF +L Q+L  +  +  P
Sbjct: 498 VRQVILFDMPNSIDEYVHQVGRASRMGVEGMAIVFVNEEDRNLFRELVQILKTAG-APIP 556

Query: 274 PELMN 260
            EL N
Sbjct: 557 RELAN 561


>08_01_0397 - 3509186-3510291,3510322-3512335
          Length = 1039

 Score = 41.1 bits (92), Expect = 4e-04
 Identities = 17/52 (32%), Positives = 31/52 (59%)
 Frame = -3

Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVL 302
           ++ +V+ Y +    E   HR+G TG AG+ G A++F+++E+     DL + L
Sbjct: 729 ELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISEEEERYAPDLVKAL 780


>08_01_0353 -
           3107628-3107774,3108177-3108213,3108248-3109164,
           3109210-3110952
          Length = 947

 Score = 40.3 bits (90), Expect = 7e-04
 Identities = 17/52 (32%), Positives = 30/52 (57%)
 Frame = -3

Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVL 302
           ++ +V+ Y +    E   HR+G TG AG+ G A++F++ E+     DL + L
Sbjct: 581 NLELVVNYDVPNHYEDYVHRVGRTGHAGRKGFAVTFISDEEERYAPDLAKAL 632


>01_06_1758 -
           39681942-39682030,39682115-39682345,39682643-39682679,
           39683604-39683835,39683937-39684022,39684126-39684218,
           39684302-39684465,39684541-39684702,39684783-39684962,
           39685079-39685515,39685614-39685669
          Length = 588

 Score = 40.3 bits (90), Expect = 7e-04
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = -3

Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVL 302
           D+  VI +    T+E   HRIG TG AG  G A +F T  ++    +L ++L
Sbjct: 486 DIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFSRNLVKIL 537


>11_06_0300 +
           22095396-22096145,22096261-22096344,22097062-22097304,
           22098535-22098702,22098895-22099008,22099378-22099890
          Length = 623

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = -3

Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVLLASS 290
           V+ V+ + +   I+   HRIG TG AGK G A +F  + +S++   L +++  S+
Sbjct: 485 VAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSMARSLAELMQESN 539


>07_01_0725 -
           5532803-5533324,5533631-5533657,5534285-5534398,
           5534564-5534731,5535951-5536193,5537178-5537261,
           5537357-5538117,5539637-5539730,5540633-5540899,
           5541311-5541316,5542538-5542657
          Length = 801

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = -3

Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVL 302
           V+ VI + +   I+   HRIG TG AGK G A +F  + ++ L   L +++
Sbjct: 660 VAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESNTPLARPLSELM 710


>03_06_0365 -
           33399422-33399925,33400470-33400583,33400762-33400929,
           33401305-33401547,33402148-33402231,33402323-33403098,
           33404423-33404636
          Length = 700

 Score = 35.9 bits (79), Expect = 0.016
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = -3

Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVL 302
           V+ VI + +   I+   HRIG TG AGK G A +F  + + +L   L +++
Sbjct: 565 VAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEGNLSLARPLCELM 615


>12_02_0340 -
           17725866-17725884,17726046-17726326,17726842-17726928,
           17727018-17727113,17728484-17728585,17728720-17728762,
           17728834-17728952,17729348-17729444,17730153-17730214,
           17730370-17730432,17730847-17730949,17731402-17731497,
           17731594-17731742,17732356-17732529,17733078-17733156,
           17733807-17733913,17733994-17734062,17734879-17735043,
           17735206-17735703
          Length = 802

 Score = 35.1 bits (77), Expect = 0.027
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -3

Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSAL 326
           V  VI +   +      HR+G T  AG+ G A++FVT +D +L
Sbjct: 508 VRTVINFSCPRDARTYLHRVGRTARAGREGYAVTFVTDDDRSL 550


>08_02_0671 -
           19890187-19890295,19891186-19891320,19891551-19891917,
           19892909-19893044,19894924-19894974,19895053-19895134,
           19895801-19895853,19895989-19896065,19896234-19896273,
           19897666-19897767,19897989-19898031,19898127-19899288,
           19899902-19900271
          Length = 908

 Score = 34.7 bits (76), Expect = 0.036
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -3

Query: 403 HRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPE 269
           HR+G     G+ G A +FVT ED A   DL  + L+  +   P E
Sbjct: 355 HRVGRVARQGRSGTAYTFVTSEDMAYLLDL-HLFLSKPLRPAPTE 398


>07_03_1392 -
           26238885-26239007,26239137-26239235,26239636-26239720,
           26239825-26240028,26240360-26240682,26241904-26242575
          Length = 501

 Score = 33.9 bits (74), Expect = 0.063
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = -3

Query: 454 VSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFV-TKEDSALFYDLKQVL 302
           V +VI Y + +      HR+G T  A + G ++SF+ T+ D  L ++++ V+
Sbjct: 390 VDLVINYDVPRYPRDYIHRVGRTARATRGGLSISFITTQRDIRLLHEIEDVV 441


>07_01_0322 -
           2258067-2258519,2258620-2258781,2258896-2259159,
           2259196-2259294,2259723-2260131,2260223-2260350,
           2261115-2261181,2262766-2262838,2262911-2263130
          Length = 624

 Score = 33.9 bits (74), Expect = 0.063
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -3

Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDS 332
           +V +VI Y +  T E   HR G T  AGK G A+   T + +
Sbjct: 417 NVDLVIHYELPNTSELFVHRSGRTARAGKKGSAILIYTNDQA 458


>12_02_1076 -
           25862671-25863159,25863290-25863451,25863614-25863838,
           25863939-25864037,25864584-25864992,25865094-25865221,
           25865955-25866329
          Length = 628

 Score = 33.1 bits (72), Expect = 0.11
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAM 356
           +V +VI + +  + E   HR G TG AGK GKA+
Sbjct: 409 NVDLVIHFELPNSSELFVHRSGRTGRAGKKGKAI 442


>07_03_0601 -
           19872780-19873099,19873148-19873151,19874196-19874357,
           19874429-19874617,19874687-19875010,19875103-19875378,
           19875436-19875478,19876110-19876188,19876473-19876555,
           19876708-19876782,19877324-19877490,19877960-19878370
          Length = 710

 Score = 32.3 bits (70), Expect = 0.19
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -3

Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLK 311
           DV  V+     + I    HR+G T    K GKA+ F+  E+  +   LK
Sbjct: 543 DVDWVVQVDCPENIALYIHRVGRTARYNKRGKALIFLCPEEEKMLEKLK 591


>03_06_0531 +
           34552206-34552598,34552665-34552735,34553363-34553369,
           34553603-34553736,34553834-34554245,34554655-34554753,
           34555059-34555283,34555652-34556029,34556412-34556555,
           34556832-34556927,34557228-34557547,34557965-34558040
          Length = 784

 Score = 32.3 bits (70), Expect = 0.19
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -3

Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVT 344
           +V ++I Y +    E   HR G TG AGK G A+   T
Sbjct: 444 NVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFT 481


>01_01_0602 -
           4484972-4485450,4485949-4485997,4486108-4486237,
           4486636-4486778,4486819-4486877,4487167-4487200,
           4487489-4487629,4487719-4487907,4488027-4488122,
           4488163-4488225,4488588-4489097
          Length = 630

 Score = 30.3 bits (65), Expect = 0.78
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = -3

Query: 457 DVSMVIXYXMAKTIEGXTHRIGXTGXAGKXGKAMSFVTKEDSALFYDLKQVL 302
           DV  VI +          HR G T   G  GK  S V K+D  L   +++ +
Sbjct: 442 DVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVAKKDVTLATRIEEAM 493


>04_03_0658 +
           18447986-18448117,18448204-18448317,18448388-18448507,
           18448589-18449215,18449289-18449462,18449545-18449809,
           18449889-18449959,18450043-18450145,18450221-18450280,
           18450533-18450744,18450830-18450901,18451446-18451502,
           18451598-18451882,18452359-18452371,18452396-18452463,
           18452649-18452747,18452836-18452967,18453038-18453141,
           18453234-18453423,18453519-18453524
          Length = 967

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 285 DTELANKTCFRS*NNAESSFVTKDIA 362
           D E+  +TCF+S  N +SSFV    A
Sbjct: 155 DKEVIGRTCFKSLLNFQSSFVPNQFA 180


>02_03_0062 + 14586152-14586461,14586792-14587075,14587807-14588079
          Length = 288

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -2

Query: 329 IVL*SEAGFVGKFR-IYVSTGTNEPPXAQHKPGTVVTK 219
           I L  ++G + K R ++   G   PP A+H  GT+ TK
Sbjct: 187 ITLRDDSGDIFKARRLFQDDGKAAPPPAEHNVGTLFTK 224


>01_02_0116 -
           11252220-11253313,11253398-11253559,11253977-11254306,
           11254328-11254377,11255195-11255389,11255532-11255625,
           11255713-11255961,11256831-11256892,11257434-11257534,
           11257766-11257880,11258384-11258475,11259197-11259333,
           11259721-11259760
          Length = 906

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +3

Query: 138 HDGNLPIAYYFRL*LGLSSEYH---LFTSFLCYDC 233
           +D  LP+  YF+   G  SE H   LFTSF+C  C
Sbjct: 397 NDDILPVLNYFKAYEG--SEPHVATLFTSFICISC 429


>05_03_0062 -
           7917596-7918129,7918279-7918447,7919007-7919182,
           7919235-7919360,7920196-7920342
          Length = 383

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +2

Query: 284 RYGTCQQNLLQIIEQCGVFFCNKGHSFTXFSCTTGXAD 397
           R   C QN+L + E+C     NK  S   FS  T   D
Sbjct: 95  RSAECLQNVLSLYERCSGQTINKEKSSVMFSMNTKEND 132


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,663,756
Number of Sequences: 37544
Number of extensions: 159542
Number of successful extensions: 348
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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