Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0359.Seq
(548 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23484| Best HMM Match : COesterase (HMM E-Value=0) 50 1e-06
SB_30325| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_56597| Best HMM Match : COesterase (HMM E-Value=0) 40 0.001
SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_56819| Best HMM Match : COesterase (HMM E-Value=0) 38 0.004
SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16) 38 0.007
SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45) 37 0.012
SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21) 36 0.029
SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_53892| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_43484| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_32070| Best HMM Match : RVT_1 (HMM E-Value=2.4e-15) 33 0.15
SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_56595| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35) 31 0.82
SB_38136| Best HMM Match : COesterase (HMM E-Value=0) 31 0.82
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_31698| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_18617| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_23484| Best HMM Match : COesterase (HMM E-Value=0)
Length = 586
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +2
Query: 338 EXCLRINVYTPSNNVSKPX-PVIFYIHAGAXYSMTGRSDLAGPYYLLDRDLVLVTINY 508
E CL +N+YTPS N PVIFYIH G ++ T D+ +L R +VLVT+ Y
Sbjct: 115 EDCLYLNIYTPSINPDGTHYPVIFYIHGGGFFAGTPIRDVTPGEFLPLRGIVLVTVQY 172
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 192 YRGIRYAEPPVGKLRFQPP 248
+ G+ YAEPPV LRF+ P
Sbjct: 52 FLGVPYAEPPVKNLRFKGP 70
>SB_30325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 332 VDEXCLRINVYTPSNNVSKPXPVIFYIHAGAXYSMTGRSDLAGPYYL-LDRDLVLVTINY 508
VDE CL +NVY PS + PV+ +IH GA + D P L ++ +++VTINY
Sbjct: 97 VDENCLTLNVYKPSATRNSSLPVLVFIHGGAFMRFSAHED--DPSLLATEQGIMVVTINY 154
>SB_56597| Best HMM Match : COesterase (HMM E-Value=0)
Length = 505
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +2
Query: 332 VDEXCLRINVYTPSNNVSKPXPVIFYIHAGAXYSMTGRSDLAGPYYLLDRDLVLVTINYG 511
+ E CL +NVY P+ + PV+ +IH G Y T + G ++++VTINY
Sbjct: 42 ISEDCLFLNVYRPT-KFNHKLPVMVWIHGGGYYHATA-NWFDGSVLASHNNVIVVTINYR 99
Query: 512 XAL 520
AL
Sbjct: 100 LAL 102
>SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 338 EXCLRINVYTPSN-NVSKPXPVIFYIHAGAXYSMTGRSDLAGPYYLLDRDLVLVTINY 508
E CL I+VYTP N + K V+ +IH G S R D + D+++VTINY
Sbjct: 157 EDCLTISVYTPQNSDPDKQRAVMVFIHGGGFTSGASR-DYDPSVLVALNDVIVVTINY 213
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +3
Query: 111 DGPVTRSQSGSFLGSWMETRRGKQFQAYRGIRYAEPPVGKLRFQPP 248
D V ++ +G+ G G Q + +R I YA+PPVGKLRF P
Sbjct: 37 DHLVVQTLAGAVRGRLNPVVHGLQVRQFRAIPYAQPPVGKLRFAAP 82
>SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Frame = +2
Query: 338 EXCLRINVYTP-----SNNVS--KPXPVIFYIHAGAXYSMTGRSDLAGPYYLLDRDLVLV 496
E CL +N+YTP S++V K PV+FYIH G+ Y T +VLV
Sbjct: 183 EDCLNLNIYTPAWPDISDSVQTRKAYPVLFYIHGGSYYLGTPNRVKTPGEIAPQYGIVLV 242
Query: 497 TINY 508
TI+Y
Sbjct: 243 TIHY 246
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +3
Query: 99 PAEPDGPVTRSQSGSFLG--SWMETRRG--KQFQAYRGIRYAEPPVGKLRFQPPK 251
P+ + + ++ G LG + + +G ++ + GI YA+ P+G LRF+PP+
Sbjct: 82 PSNTEDVIINTKYGKVLGLAQTLASAQGPARKINKFLGIPYAQQPIGDLRFKPPQ 136
>SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 985
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = +2
Query: 239 PAPKTIRQYKERVDASKEGPACP---LPVP--PTYYVDEXCLRINVYTPSNNVSKPXPVI 403
P P T +KE A G CP +P+ T + E CL ++VY P N + PV+
Sbjct: 62 PQPPT--PWKEVKQAILPGKICPQVEIPIAGQTTAIMSEDCLILDVYAP-NITNSSLPVM 118
Query: 404 FYIHAGAXYSMTGRSDLAGPYYLLDRDLVLVTINY 508
+IH G ++ RS G + ++++V I Y
Sbjct: 119 VFIHGGGFFAGGARS-FDGSFQATIGNVIVVVIQY 152
>SB_56819| Best HMM Match : COesterase (HMM E-Value=0)
Length = 613
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 332 VDEXCLRINVYTPSNN-VSKPXPVIFYIHAGAXYSMTGRSDLAGPYYLLDRDLVLVTINY 508
+ E CL +NV+ P+ +K PV+ +IH G Y +G G D+++VT+NY
Sbjct: 169 MSEDCLFLNVFRPAGTKATKDLPVMVFIHGGGYYRGSG-DVYDGTPLAAYNDVIVVTMNY 227
Query: 509 GXAL 520
L
Sbjct: 228 RLGL 231
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 177 KQFQAYRGIRYAEPPVGKLRFQPPK 251
++ +++ GI +AEPP+G LRF P K
Sbjct: 51 REAESFYGIPFAEPPIGDLRFVPSK 75
>SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 87 TEQKPAEPDGPVTRSQSGSFLGSWME----TRRGKQFQAYRGIRYAEPPVGKLRFQPPK 251
T+ AE ++ G GS + R K + + G+ YA PP+GKLRF PP+
Sbjct: 31 TDGSTAEAQSVTANTKYGEIKGSVVSYANSNGRVKSLKTFVGVPYASPPLGKLRFVPPR 89
>SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16)
Length = 635
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +2
Query: 338 EXCLRINVYTPSN-NVSKPXPVIFYIHAGAXYSMTGRS-DLAGPYYLLDRDLVLVTINY 508
E CL +NV+TP + N + PV+ YI G + + G S D+ G ++ +V+VT NY
Sbjct: 335 EDCLTLNVHTPHDANENSSLPVLVYI--GGDFFVAGSSNDVDGSVLASNQKVVVVTFNY 391
>SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45)
Length = 762
Score = 36.7 bits (81), Expect = 0.012
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = +2
Query: 314 VPPTYYVDEXCLRINVYTPSNNVSKPXPVIFYIHAGAXYSMTGRSDLAGPYYLLDRDLVL 493
+P T V E CL +N+Y P+++ + PV+ ++H G Y +G + D+++
Sbjct: 499 IPDT--VSEDCLYLNIYRPAHSHHR-LPVMVWLHGGGNYVGSG-NWYHSSVLSSHNDIIV 554
Query: 494 VTINYGXAL 520
VT+N+ AL
Sbjct: 555 VTLNHRLAL 563
>SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21)
Length = 424
Score = 35.5 bits (78), Expect = 0.029
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 120 VTRSQSGSFLGSWMETRRGKQFQAYRGIRYAEPPVGKLRFQPPK 251
+ +++SG+ G T G + +R IRYAE P+G LRF K
Sbjct: 52 IVQTKSGAVEGRLEPTFHGLCTRQFRAIRYAEAPIGDLRFAKSK 95
>SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 34.7 bits (76), Expect = 0.050
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 332 VDEXCLRINVYTPSN----NVSKPXPVIFYIHAGAXYSMTGRSDLAGPYYLLDRDLVLVT 499
+ E CL +NV+ P+ N S PV+ ++ GA T + ++V+V+
Sbjct: 108 ISEYCLNLNVFVPNTTEFRNESASYPVMVWVQGGAFIMGTSARQSDASLLATEGEIVVVS 167
Query: 500 INY 508
INY
Sbjct: 168 INY 170
>SB_53892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 33.5 bits (73), Expect = 0.12
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Frame = +2
Query: 260 QYKERVDASKEGPACPLPVPPT------YYVDEXCLRINVYTP--SNNVSKPXPVIFYIH 415
+++E ++A++ CP V P+ Y E CL +N++ P K +
Sbjct: 73 KWEETLEATQFTKPCPQLVIPSKGAKTLYETTENCLNLNIFVPVKEGKTWKDSLAVVVWI 132
Query: 416 AGAXYSMTGRSDLAGPYYLLDRDLVLVTIN 505
AG YS ++ G + + ++++VT+N
Sbjct: 133 AGLFYSYGNAVEMDGRFLASNEEVIVVTLN 162
>SB_43484| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 33.1 bits (72), Expect = 0.15
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Frame = +2
Query: 242 APKTIRQYKERVDASKEGPACPLPVPP------TYYVDEXCLRINVYTPSNNVS-KPXPV 400
AP + +A G CP + P T + E CL +NV+ P+N + V
Sbjct: 13 APVNPEPWTTTKNAFNFGKICPQAITPYTANFKTSEMSEDCLNLNVFVPNNTAAGAMKSV 72
Query: 401 IFYIHAGAXYSMTGRSDLAGPYYLL-DRDLVLVTINY 508
+ +I+ G M G + L L + D+++V +NY
Sbjct: 73 MVWIYGGGF--MNGANRLYESSILAGEGDVIVVVVNY 107
>SB_32070| Best HMM Match : RVT_1 (HMM E-Value=2.4e-15)
Length = 345
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 177 KQFQAYRGIRYAEPPVGKLRFQPPK 251
++ +++ GI +AEPP+G LRF P K
Sbjct: 286 REAESFYGIPFAEPPIGDLRFVPSK 310
>SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1659
Score = 33.1 bits (72), Expect = 0.15
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +2
Query: 278 DASKEGPACP-LPVPPTYYVDEXCLRINVYTPSNNVSKPXPVIFYIHAGAXYSMTGRSD- 451
+A+ G CP L E CL +NV+TPS ++ + PV+ +IH G +G
Sbjct: 1087 NAAFYGKVCPQLNSEDQVIGSEDCLYLNVWTPSVDIKQ--PVLVFIHGGELTYGSGHDSG 1144
Query: 452 -LAGPYYLLDRDLVLVTINY 508
P ++ + +V ++ NY
Sbjct: 1145 IHPTPEFVSNLGVVGISFNY 1164
Score = 31.9 bits (69), Expect = 0.36
Identities = 17/78 (21%), Positives = 38/78 (48%)
Frame = +3
Query: 15 MLLKLIFICAIVYYADAHKNNKRQTEQKPAEPDGPVTRSQSGSFLGSWMETRRGKQFQAY 194
+L +IF+ ++ K++ + ++ E + + G+ G+ R +
Sbjct: 1003 ILSTVIFVAVLIALLTQGKSS--ENDENDDEDSSILIATDGGTIRGT-----RNSNAWVF 1055
Query: 195 RGIRYAEPPVGKLRFQPP 248
+GI YA+PP+ +R++PP
Sbjct: 1056 KGIPYAKPPINDMRWKPP 1073
>SB_56595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 102 AEPDGPVTRSQSGSFLGSWMETRRGKQFQAYRGIRYAEPPVGKLRFQPPK 251
AE D +T Q G G G + + + GI YA PVG+LRF P+
Sbjct: 6 AEQDVVITLEQ-GKIQGMREPVPGGYEVEIFLGIPYARAPVGELRFADPQ 54
>SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35)
Length = 1208
Score = 30.7 bits (66), Expect = 0.82
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 172 AESSSRPIGA*DTLSHRSGNYDSSPQNYSAIQRTR*REQRGPGL 303
+E +S I DT SH+ GN +S+ QN I+++ +++ G L
Sbjct: 408 SEEASHFIKLLDTFSHKGGNIESAEQNKQYIEKSPRKQKLGKRL 451
>SB_38136| Best HMM Match : COesterase (HMM E-Value=0)
Length = 590
Score = 30.7 bits (66), Expect = 0.82
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 192 YRGIRYAEPPVGKLRFQPP 248
+ GI +A PPV KLRF PP
Sbjct: 58 FLGIPFASPPVKKLRFSPP 76
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 338 EXCLRINVYTPSNNVSKPXPVIFYIHAGAXYSMTGRSDLAGPYYLLDR-DLVLVTINY 508
+ CL +N+Y P N+ V+ YIH G S + P + +VLVTI Y
Sbjct: 115 DDCLYLNIYAP-NSTGTKYAVMVYIHGG---GYEAGSPIISPGDAIPLWGVVLVTIQY 168
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 138 GSFLGSWMETRRGKQFQAYRGIR---YAEPPVGKLRFQPPKL-FGNTKNALTRAKRAR 299
G+ G++ RG+ FQA RG R + +P G+ F+P L ++ +L+ R+R
Sbjct: 594 GALRGTFRGRGRGRGFQAIRGARGRGFNDPTRGRHIFKPGSLRRSRSRTSLSSRSRSR 651
>SB_31698| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 406 LHSRRSVXLHDGQERPGRALLLAGQRSG 489
LHS+R + L D ERPG +++ SG
Sbjct: 105 LHSKRLIYLADAYERPGEMIVIMEFVSG 132
>SB_18617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Frame = +3
Query: 210 AEPPVGKLRF---QPPKLFGNTKNA 275
AEPPV +LRF +PPK + +NA
Sbjct: 5 AEPPVDELRFASPKPPKYWNGIRNA 29
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,876,096
Number of Sequences: 59808
Number of extensions: 348304
Number of successful extensions: 1031
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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