Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0359.Seq
(548 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 58 6e-11
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 58 6e-11
AF213011-1|AAG43567.1| 62|Apis mellifera esterase A2 protein. 50 1e-08
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 34 0.001
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 34 0.001
AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 27 0.13
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 24 0.88
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 24 1.2
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 2.7
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 4.7
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 6.2
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 6.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 6.2
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 58.0 bits (134), Expect = 6e-11
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Frame = +2
Query: 242 APKTIRQYKERVDASKEGPAC----PLPVPPTYYVD--EXCLRINVYTPSNNV-SKPXPV 400
AP+ I + + A+K G C LPV P ++ E CL +NVY P++ S+ PV
Sbjct: 65 APQKIPAWIGELSATKFGFPCLQYTQLPVNPRDKIEGAEDCLYLNVYVPADRTPSQSLPV 124
Query: 401 IFYIHAGAXYSMTGRSDLAGPYYLLDRDLVLVTINY 508
IF+IH GA +G G YL+D D++ VTINY
Sbjct: 125 IFWIHGGAFQFGSGIP--MGAKYLMDSDVIFVTINY 158
Score = 49.2 bits (112), Expect = 3e-08
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 111 DGPVTRSQSGSFLGSWMETRRGKQFQAYRGIRYAEPPVGKLRFQPPK 251
D P ++ G+ G + + GKQ++AY GI YA PPVGK RF+ P+
Sbjct: 21 DAPRVKTPLGAIKGYYKISGNGKQYEAYEGIPYALPPVGKFRFKAPQ 67
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 58.0 bits (134), Expect = 6e-11
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Frame = +2
Query: 242 APKTIRQYKERVDASKEGPAC----PLPVPPTYYVD--EXCLRINVYTPSNNV-SKPXPV 400
AP+ I + + A+K G C LPV P ++ E CL +NVY P++ S+ PV
Sbjct: 65 APQKIPAWIGELSATKFGFPCLQYTQLPVNPRDKIEGAEDCLYLNVYVPADRTPSQSLPV 124
Query: 401 IFYIHAGAXYSMTGRSDLAGPYYLLDRDLVLVTINY 508
IF+IH GA +G G YL+D D++ VTINY
Sbjct: 125 IFWIHGGAFQFGSGIP--MGAKYLMDSDVIFVTINY 158
Score = 49.2 bits (112), Expect = 3e-08
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 111 DGPVTRSQSGSFLGSWMETRRGKQFQAYRGIRYAEPPVGKLRFQPPK 251
D P ++ G+ G + + GKQ++AY GI YA PPVGK RF+ P+
Sbjct: 21 DAPRVKTPLGAIKGYYKISGNGKQYEAYEGIPYALPPVGKFRFKAPQ 67
>AF213011-1|AAG43567.1| 62|Apis mellifera esterase A2 protein.
Length = 62
Score = 50.4 bits (115), Expect = 1e-08
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = +2
Query: 338 EXCLRINVYTPSNNVSKPXPVIFYIHAGAXYSMTGRSDLAGPYYLLDRDLVLVTINY 508
E CL ++VYT S + SKP V+FY+H GA S T P YLL +D+V+V+ NY
Sbjct: 2 EDCLYLDVYTNSLDQSKP--VMFYVHEGAFISGTSSFHEMRPDYLLPKDVVVVSSNY 56
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 33.9 bits (74), Expect = 0.001
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +3
Query: 27 LIFICAIVYYADAHKNNKRQTEQKPAEPDGPVTRSQSGSFLGSWMETRRGKQFQAYRGIR 206
L+F + + N + Q+ + P+ + + + T K+ + GI
Sbjct: 7 LLFFLLLSSCTRPSRGNAVPSSQRGNVHNDPLVVETTSGLVRGFPRTVLDKEVHVFYGIP 66
Query: 207 YAEPPVGKLRFQPP 248
+A+PP+G LRF+ P
Sbjct: 67 FAKPPIGPLRFRKP 80
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 33.9 bits (74), Expect = 0.001
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +3
Query: 27 LIFICAIVYYADAHKNNKRQTEQKPAEPDGPVTRSQSGSFLGSWMETRRGKQFQAYRGIR 206
L+F + + N + Q+ + P+ + + + T K+ + GI
Sbjct: 7 LLFFLLLSSCTRPSRGNAVPSSQRGNVHNDPLVVETTSGLVRGFPRTVLDKEVHVFYGIP 66
Query: 207 YAEPPVGKLRFQPP 248
+A+PP+G LRF+ P
Sbjct: 67 FAKPPIGPLRFRKP 80
>AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein.
Length = 169
Score = 27.1 bits (57), Expect = 0.13
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 458 GPYYLLDRDLVLVTINY 508
G YL+D D++ VTINY
Sbjct: 13 GAKYLMDSDVIFVTINY 29
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 24.2 bits (50), Expect = 0.88
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 278 DASKEGPACPLPVPPTYYV 334
D+ +E P C L + PTY V
Sbjct: 176 DSKEEHPTCALDLTPTYAV 194
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 232 YDSSPQNYSAIQRTR*REQRGPGLP 306
Y S +YS ++RT R+Q+ P P
Sbjct: 1335 YSSIDSDYSTLERTAWRQQQPPPPP 1359
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.6 bits (46), Expect = 2.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 129 SQSGSFLGSWMETRRGKQFQAYRGIRYAE 215
S SGS GSW +Q Q R ++Y +
Sbjct: 1071 SDSGSSNGSWTAGTVSQQKQKRRMVKYGK 1099
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.8 bits (44), Expect = 4.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 2 VLKENVVEINIYLCHCVL 55
+LKEN+ E +Y C+L
Sbjct: 195 MLKENMPEFPLYQLSCIL 212
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 6.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 326 YYVDEXCLRINVYTP 370
Y +DE +I++YTP
Sbjct: 344 YLIDEYGKKIDIYTP 358
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 6.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 326 YYVDEXCLRINVYTP 370
Y +DE +I++YTP
Sbjct: 344 YLIDEYGKKIDIYTP 358
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.2
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +3
Query: 201 IRYAEPPVGKLRFQPPKLF 257
+RY PP RF PP +
Sbjct: 375 LRYIGPPTSFPRFIPPNAY 393
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,897
Number of Sequences: 438
Number of extensions: 3648
Number of successful extensions: 25
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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