Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0357.Seq
(348 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0ZB80 Cluster: EIF2B-beta protein; n=1; Bombyx mori|Re... 188 2e-47
UniRef50_Q4PFW6 Cluster: Putative uncharacterized protein; n=1; ... 74 8e-13
UniRef50_Q9UT76 Cluster: Translation initiation factor eIF2B; n=... 68 5e-11
UniRef50_UPI00003C067A Cluster: PREDICTED: similar to Translatio... 66 1e-10
UniRef50_Q90511 Cluster: Translation initiation factor eIF-2B su... 66 2e-10
UniRef50_P49770 Cluster: Translation initiation factor eIF-2B su... 64 6e-10
UniRef50_Q0IXX7 Cluster: Os10g0392700 protein; n=10; Magnoliophy... 63 1e-09
UniRef50_Q5K8D6 Cluster: Eukaryotic translation initiation facto... 62 3e-09
UniRef50_Q54EY2 Cluster: Translation initiation factor eIF-2B be... 58 6e-08
UniRef50_O76863 Cluster: CG2677-PA; n=4; Diptera|Rep: CG2677-PA ... 56 2e-07
UniRef50_A4S6C7 Cluster: Predicted protein; n=2; Ostreococcus|Re... 45 3e-04
UniRef50_Q5DEP3 Cluster: SJCHGC00391 protein; n=3; Schistosoma j... 43 0.002
UniRef50_A4I2S1 Cluster: Translation initiation factor eIF2B sub... 40 0.016
UniRef50_A3CJH4 Cluster: Putative uncharacterized protein; n=2; ... 38 0.048
UniRef50_Q0UTG5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.083
UniRef50_Q57VZ6 Cluster: Translation initiation factor eIF-2B be... 37 0.11
UniRef50_Q0UDB6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.19
UniRef50_UPI00015B63B5 Cluster: PREDICTED: similar to translatio... 35 0.44
UniRef50_A4BHY6 Cluster: Fused predicted sugar kinase fused/unch... 35 0.44
UniRef50_P12754 Cluster: Translation initiation factor eIF-2B su... 33 1.0
UniRef50_A0GYY4 Cluster: Initiation factor 2B related; n=2; Chlo... 33 1.8
UniRef50_Q9M999 Cluster: F27J15.24; n=13; Eukaryota|Rep: F27J15.... 33 1.8
UniRef50_Q570L2 Cluster: Putative translation initiation factor ... 33 1.8
UniRef50_Q0CCL6 Cluster: Putative uncharacterized protein; n=1; ... 33 1.8
UniRef50_A1CQG7 Cluster: Translation regulator GCD7; n=8; Euroti... 32 2.4
UniRef50_A0BG97 Cluster: Chromosome undetermined scaffold_105, w... 31 4.1
UniRef50_UPI0000F2058B Cluster: PREDICTED: similar to Probable J... 31 5.5
UniRef50_Q62JF8 Cluster: Putative uncharacterized protein; n=1; ... 31 5.5
UniRef50_O01502 Cluster: Putative uncharacterized protein; n=1; ... 31 5.5
UniRef50_A4YW52 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_A4VP44 Cluster: EAL domain protein; n=3; Proteobacteria... 31 7.2
UniRef50_Q4QHB9 Cluster: Translation initiation factor eIF-2B be... 31 7.2
UniRef50_O74055 Cluster: Glucose-1-dehydrogenase; n=4; Thermopro... 31 7.2
UniRef50_Q53217 Cluster: Uncharacterized short-chain type dehydr... 31 7.2
UniRef50_Q1RLR5 Cluster: B-cell CLL/lymphoma 11A; n=6; Euteleost... 30 9.5
UniRef50_Q98A91 Cluster: Transcriptional regulator; n=2; Mesorhi... 30 9.5
UniRef50_Q01GA5 Cluster: Endomembrane protein 70, putative; n=2;... 30 9.5
UniRef50_Q0U062 Cluster: Putative uncharacterized protein; n=1; ... 30 9.5
UniRef50_O58185 Cluster: Putative translation initiation factor ... 30 9.5
>UniRef50_Q0ZB80 Cluster: EIF2B-beta protein; n=1; Bombyx mori|Rep:
EIF2B-beta protein - Bombyx mori (Silk moth)
Length = 353
Score = 188 bits (458), Expect = 2e-47
Identities = 97/115 (84%), Positives = 99/115 (86%)
Frame = +3
Query: 3 RTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPTQNRNCKVVVAEGTDVGESH 182
RTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPTQNRNCKVVVAEGTDVGESH
Sbjct: 145 RTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPTQNRNCKVVVAEGTDVGESH 204
Query: 183 AMARRLSNSGVSVTVINSSCVFAVCPXSXRWWXRCMLRXGXCAVLGDSGLHSVTL 347
AMARRLSNSGVSVTVINSSCVFAV + G AVLGD+GLHSVTL
Sbjct: 205 AMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVLGDAGLHSVTL 259
>UniRef50_Q4PFW6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 601
Score = 73.7 bits (173), Expect = 8e-13
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCKVVVAEGTDVGESHA 185
ELET+ +I+ +R+H+ + EV+LT G+ A V+ FLR ++R V+VAE HA
Sbjct: 386 ELETVDDNISKVSRDHIHSGEVILTLGSCATVQAFLRAAAKDRKFTVIVAETAPSYSGHA 445
Query: 186 MARRLSNSGVSVTVINSSCVFAVCP 260
+AR L+ +G+SV +I SC+F V P
Sbjct: 446 LARTLAKAGISVLLIPDSCIFGVMP 470
>UniRef50_Q9UT76 Cluster: Translation initiation factor eIF2B; n=1;
Schizosaccharomyces pombe|Rep: Translation initiation
factor eIF2B - Schizosaccharomyces pombe (Fission yeast)
Length = 393
Score = 67.7 bits (158), Expect = 5e-11
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERFLR-PTQNRNCKVVVAEGTDVGE--S 179
EL+ + + I Q+ +H+ ++E++LT G S VE FLR + R V+VAEG + S
Sbjct: 183 ELDKINTDIEVQSMDHLHSNEIILTQGCSKTVEAFLRFAAKKRKFSVIVAEGFPNNQKGS 242
Query: 180 HAMARRLSNSGVSVTVINSSCVFAVCPXSXRWWXRCMLRXGXCAVLGDSGL 332
HAMA+RL+ +G+ TVI+ + +FA+ + + G A+LG+ GL
Sbjct: 243 HAMAKRLAQAGIDTTVISDATIFAIMSRVNK------VILGTHAILGNGGL 287
>UniRef50_UPI00003C067A Cluster: PREDICTED: similar to Translation
initiation factor eIF-2B subunit beta (eIF-2B GDP-GTP
exchange factor subunit beta) (S20I15) (S20III15); n=2;
Endopterygota|Rep: PREDICTED: similar to Translation
initiation factor eIF-2B subunit beta (eIF-2B GDP-GTP
exchange factor subunit beta) (S20I15) (S20III15) - Apis
mellifera
Length = 353
Score = 66.5 bits (155), Expect = 1e-10
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERFL-RPTQNRNCKVVVAEGTDVGESHA 185
ELET +IT QA EH+ ++E+++T G S LVE F R + R +V+VAEG H
Sbjct: 142 ELETCAENITQQASEHIHSNEIIMTIGTSKLVEEFFKRAAETRAFEVIVAEGGPSLSGHE 201
Query: 186 MARRLSNSGVSVTVINSSCVFAV 254
MA L+ + + T+I+ +FA+
Sbjct: 202 MAVNLAKAKIKTTLISDVAIFAM 224
>UniRef50_Q90511 Cluster: Translation initiation factor eIF-2B
subunit beta; n=12; Deuterostomia|Rep: Translation
initiation factor eIF-2B subunit beta - Fugu rubripes
(Japanese pufferfish) (Takifugu rubripes)
Length = 355
Score = 66.1 bits (154), Expect = 2e-10
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 TELETMRSSITSQAREHVRADEVLLTFGASALVERFLR-PTQNRNCKVVVAEGTDVGESH 182
TELE +I QA EH+ ++EV++T G S VE FL+ + R V+VAE + H
Sbjct: 146 TELEGTTDNIAMQALEHIHSNEVIMTVGRSRTVEAFLKDAARKRKFHVIVAECAPFCQGH 205
Query: 183 AMARRLSNSGVSVTVINSSCVFAV 254
MA LS +G+ TVI + +FAV
Sbjct: 206 KMATSLSTAGIETTVIADAAIFAV 229
>UniRef50_P49770 Cluster: Translation initiation factor eIF-2B
subunit beta; n=21; Eumetazoa|Rep: Translation
initiation factor eIF-2B subunit beta - Homo sapiens
(Human)
Length = 351
Score = 64.1 bits (149), Expect = 6e-10
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERFLR-PTQNRNCKVVVAEGTDVGESHA 185
ELE +I +QA EH+ ++EV++T G S VE FL+ + R V+VAE + H
Sbjct: 143 ELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFHVIVAECAPFCQGHE 202
Query: 186 MARRLSNSGVSVTVINSSCVFAV 254
MA LS +G+ TV+ + +FAV
Sbjct: 203 MAVNLSKAGIETTVMTDAAIFAV 225
>UniRef50_Q0IXX7 Cluster: Os10g0392700 protein; n=10;
Magnoliophyta|Rep: Os10g0392700 protein - Oryza sativa
subsp. japonica (Rice)
Length = 423
Score = 63.3 bits (147), Expect = 1e-09
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPTQN--RNCKVVVAEGTDVGESH 182
E++T I+ QA EH+ +EV+LT G S V+ FL + R+ +V VAEG + H
Sbjct: 197 EIDTCYDQISEQAVEHIHQNEVILTLGRSRTVKEFLYAAKEKKRSFRVFVAEGAPRYKGH 256
Query: 183 AMARRLSNSGVSVTVINSSCVFAV 254
+A+ L GV TVI S VFA+
Sbjct: 257 VLAKELVEKGVQTTVITDSAVFAM 280
>UniRef50_Q5K8D6 Cluster: Eukaryotic translation initiation factor
2B, subunit 2, putative; n=2; Filobasidiella
neoformans|Rep: Eukaryotic translation initiation factor
2B, subunit 2, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 453
Score = 61.7 bits (143), Expect = 3e-09
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCKVVVAEGTDVGESHA 185
ELET + AREH+ + E++LT G S VE FL+ ++R VVVAE H+
Sbjct: 241 ELETTHEDVAKGAREHIHSSEIILTMGHSRTVEAFLKQAYKDRKFTVVVAESAPSYLGHS 300
Query: 186 MARRLSNSGVSVTVINSSCVFAVCP 260
+A LS SG+ +I S + A+ P
Sbjct: 301 LASSLSASGIPTLLIPDSSIHALLP 325
>UniRef50_Q54EY2 Cluster: Translation initiation factor eIF-2B beta
subunit; n=1; Dictyostelium discoideum AX4|Rep:
Translation initiation factor eIF-2B beta subunit -
Dictyostelium discoideum AX4
Length = 388
Score = 57.6 bits (133), Expect = 6e-08
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERFLR-PTQNRNCKVVVAEGTDVGESHA 185
ELE + ++ QA EH+ ++E ++T G S VE FL+ + R+ KV+V E E
Sbjct: 178 ELEGLHRNVAEQAIEHIHSNETIMTLGCSRTVEEFLKEAARKRSFKVIVVETAPSLEGQK 237
Query: 186 MARRLSNSGVSVTVINSSCVFAV 254
A LS + + T+I S VFA+
Sbjct: 238 TAISLSKASIDTTLITDSAVFAM 260
>UniRef50_O76863 Cluster: CG2677-PA; n=4; Diptera|Rep: CG2677-PA -
Drosophila melanogaster (Fruit fly)
Length = 352
Score = 55.6 bits (128), Expect = 2e-07
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Frame = +3
Query: 6 TELETMRSSITSQAREHVRADEVLLTFGASALVERFL-RPTQNRN-CKVVVAEGTDVGES 179
TELET +I QA EH+ + E++LT G S VE FL R + R ++VAE
Sbjct: 142 TELETSSENICVQAEEHIHSSEIILTLGHSRSVENFLKRAIKKRQFLTIIVAECAPACRG 201
Query: 180 HAMARRLSN-SGVSVTVINSSCVFAV 254
H +A L+N V + VI + +FA+
Sbjct: 202 HNLAASLANEKNVEIVVIPDAAIFAM 227
>UniRef50_A4S6C7 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 301
Score = 45.2 bits (102), Expect = 3e-04
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASA-----LVERFLRPTQNRNC--------KVV 149
E+ET+ ++I SQ+ + V V++T G++A L E FLR + VV
Sbjct: 78 EMETVSTNIASQSSDFVTNGCVVMTMGSNASAGTGLAEAFLRDANKKRSASEGGGGFSVV 137
Query: 150 VAEGTDVGESHAMARRLSNSGV-SVTVINSSCVFAVCPXSXRWWXRCMLRXGXCAVLGDS 326
VAE + HAMA+ L+ GV V++I S V+A P + L DS
Sbjct: 138 VAESAPRYDGHAMAKSLAERGVRDVSLICDSAVYATMPSVKLCVLSARGVLADGSALVDS 197
Query: 327 GLHSVTL 347
G +++ L
Sbjct: 198 GAYNIAL 204
>UniRef50_Q5DEP3 Cluster: SJCHGC00391 protein; n=3; Schistosoma
japonicum|Rep: SJCHGC00391 protein - Schistosoma
japonicum (Blood fluke)
Length = 365
Score = 42.7 bits (96), Expect = 0.002
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERFLR--PTQNRNCKVVVAEGTDVGESH 182
E+++ +S+ + + + +DE+++T G S V FLR + RN KV++ E H
Sbjct: 123 EIKSCLTSLGDLSLDFIHSDELIMTSGYSKAVHHFLRHAAKKGRNFKVIICECYPDNLGH 182
Query: 183 AMARRLSNSGVSVTVINSSCVFAV 254
+A LS V V ++ S F +
Sbjct: 183 KLAEDLSKDNVDVILVPDSHAFGL 206
>UniRef50_A4I2S1 Cluster: Translation initiation factor eIF2B
subunit-like protein, putative; n=3; Leishmania|Rep:
Translation initiation factor eIF2B subunit-like
protein, putative - Leishmania infantum
Length = 669
Score = 39.5 bits (88), Expect = 0.016
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Frame = +3
Query: 18 TMRSSITSQAREHVRADEVLLTFGASALVERFL----RPTQNRNCKVVVAEGTDVGESHA 185
+ +S + ++ +V + + +L FG S+LVE L R Q + +V+V + + E
Sbjct: 410 SFKSIVEDRSLPYVSSSDTILVFGRSSLVEYILLSRSRDPQCKPKRVIVIDSAPLFEGRQ 469
Query: 186 MARRLSNSGVSVT--VINSSC 242
+A +LS++G+ VT +I + C
Sbjct: 470 LAEKLSSAGIGVTYGLITACC 490
>UniRef50_A3CJH4 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 587
Score = 37.9 bits (84), Expect = 0.048
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 33 ITSQAREHVRADEVLLTFGASALVERFLRPTQ--NRNCKVVVAEGTDVGESHAMARRLSN 206
I S A VR D+VLLT+ +S++VE + +VVV + E A+ RL
Sbjct: 398 IVSHAIAKVRDDDVLLTYASSSVVEMIFDHANELGKKFRVVVVDSRPNNEGQALLHRLVA 457
Query: 207 SGVSVTVINSSCV 245
G+S T + + +
Sbjct: 458 KGISCTYTHINAI 470
>UniRef50_Q0UTG5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 486
Score = 37.1 bits (82), Expect = 0.083
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERFL 116
ELET I A EH+ A+E++LT AS V++FL
Sbjct: 257 ELETSDKQIAEVALEHIHANEIILTHTASTTVQKFL 292
>UniRef50_Q57VZ6 Cluster: Translation initiation factor eIF-2B beta
subunit, putative; n=1; Trypanosoma brucei|Rep:
Translation initiation factor eIF-2B beta subunit,
putative - Trypanosoma brucei
Length = 475
Score = 36.7 bits (81), Expect = 0.11
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 RTELETMRSSITSQAREHVRADEVLLTFGASALVERFL--RPTQNRNCKVVVAEGTDV-- 170
R E+E M ++ +A + + + ++T G+S R+L + + KV++ EG +
Sbjct: 247 RAEIEGMCDALCERAVKQLHPTDTVITTGSSHTTRRYLLHALSAGTSFKVIILEGAPLLC 306
Query: 171 GESHAMARRLSNSGVSVTVINSSCVFAV 254
SH +A L + V V+ S FAV
Sbjct: 307 EASHKLAAELRSKHAEVQVLPDSSAFAV 334
>UniRef50_Q0UDB6 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 497
Score = 35.9 bits (79), Expect = 0.19
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 33 ITSQAREHVRADEVLLTFGASALVERFLRPTQNRNC--KVVVAEGTDVGESHAMARRLSN 206
I A + +V+LT+ AS++VE+ + V+V + + E +AR+L+N
Sbjct: 269 IRDLAATKIEPGDVVLTYAASSIVEQAIIQAHANGIPFSVIVVDSKPLFEGRQLARKLAN 328
Query: 207 SGVSV 221
+GVSV
Sbjct: 329 AGVSV 333
>UniRef50_UPI00015B63B5 Cluster: PREDICTED: similar to translation
initiation factor 2b, delta subunit; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to translation
initiation factor 2b, delta subunit - Nasonia
vitripennis
Length = 663
Score = 34.7 bits (76), Expect = 0.44
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +3
Query: 30 SITSQAREHVRADEVLLTFGASALVERFLRP--TQNRNCKVVVAEGTDVGESHAMARRLS 203
+I++ ++ + +V+LT+G S+L+ + L T + +VVV +G E + RRL
Sbjct: 455 AISNAIQKKILNGDVILTYGFSSLIHKILCDAYTAGKKFRVVVVDGRPWLEGKELLRRLV 514
Query: 204 NSGVSVTVINSSCVFAVCP 260
GV + I + + + P
Sbjct: 515 KHGVDCSYILINALSFIMP 533
>UniRef50_A4BHY6 Cluster: Fused predicted sugar kinase
fused/uncharaterized domain; n=1; Reinekea sp.
MED297|Rep: Fused predicted sugar kinase
fused/uncharaterized domain - Reinekea sp. MED297
Length = 481
Score = 34.7 bits (76), Expect = 0.44
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +3
Query: 15 ETMRSSITSQAREHVRADEVLLTFGASALVERFLRPTQNRNCKVVVAEGTDVGESHAMAR 194
E +R + A H L+ A + V + ++ + VVV +G + G+ + +AR
Sbjct: 20 EQVRYAEQHWAENHGGDTWPLMNAAAQSFVRQTFERVRHGSVLVVVGKGNNGGDGYCIAR 79
Query: 195 RLSNSGVSVTV 227
RL +GV VTV
Sbjct: 80 RLYEAGVPVTV 90
>UniRef50_P12754 Cluster: Translation initiation factor eIF-2B
subunit delta; n=6; Saccharomycetales|Rep: Translation
initiation factor eIF-2B subunit delta - Saccharomyces
cerevisiae (Baker's yeast)
Length = 651
Score = 33.5 bits (73), Expect = 1.0
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +3
Query: 3 RTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPTQ---NRNCKVVVAEGTDVG 173
+ ++E I A + ++T+G+S ++ L +N KV+V + +
Sbjct: 376 KEKIELADQLIIDNASTQIEESTTIVTYGSSKVLTELLLHNAISLKKNIKVIVVDSRPLF 435
Query: 174 ESHAMARRLSNSGVSV 221
E MA L N+GV+V
Sbjct: 436 EGRKMAETLRNAGVNV 451
>UniRef50_A0GYY4 Cluster: Initiation factor 2B related; n=2;
Chloroflexus|Rep: Initiation factor 2B related -
Chloroflexus aggregans DSM 9485
Length = 310
Score = 32.7 bits (71), Expect = 1.8
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +3
Query: 3 RTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPTQN--RNCKVVVAEGTDVGE 176
R L ++I + + +LT G S V LR R +V+ E +GE
Sbjct: 99 RRRLHVHEAAIAETTLRLIGEEARILTIGRSTTVRAALRHAHRAGRRPRVICTESRPLGE 158
Query: 177 SHAMARRLSNSGVSVTVI 230
+A L+ SG+ T+I
Sbjct: 159 GRMLAGELAASGIHTTLI 176
>UniRef50_Q9M999 Cluster: F27J15.24; n=13; Eukaryota|Rep: F27J15.24
- Arabidopsis thaliana (Mouse-ear cress)
Length = 756
Score = 32.7 bits (71), Expect = 1.8
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 30 SITSQAREHVRADEVLLTFGASALVERFLRPTQ--NRNCKVVVAEGTDVGESHAMARRLS 203
+I A +R EVLLT+G S +VE L + +VV+ + E + RRL
Sbjct: 540 AIVQHAVTKIRDGEVLLTYGFSCVVEMILLYAHEIGKKFRVVIVDSRPNLEGQKLLRRLV 599
Query: 204 NSGVSVTVINSSCV 245
G+ T + + +
Sbjct: 600 TRGLDCTYTHINAI 613
>UniRef50_Q570L2 Cluster: Putative translation initiation factor
eIF-2B delta subunit; n=2; Arabidopsis thaliana|Rep:
Putative translation initiation factor eIF-2B delta
subunit - Arabidopsis thaliana (Mouse-ear cress)
Length = 627
Score = 32.7 bits (71), Expect = 1.8
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 30 SITSQAREHVRADEVLLTFGASALVERFLRPTQ--NRNCKVVVAEGTDVGESHAMARRLS 203
+I A +R EVLLT+G S +VE L + +VV+ + E + RRL
Sbjct: 455 AIVQHAVTKIRDGEVLLTYGFSCVVEMILLYAHEIGKKFRVVIVDSRPNLEGQKLLRRLV 514
Query: 204 NSGVSVTVINSSCV 245
G+ T + + +
Sbjct: 515 TRGLDCTYTHINAI 528
>UniRef50_Q0CCL6 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 416
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERF-LRPTQNRNCKVVVAE 158
EL + I + A +H+ ++E++LT +S V+RF L+ R V+ AE
Sbjct: 189 ELGQVDDQIAAYALDHIHSNEIILTHTSSTTVQRFLLKAAAKRKFTVIHAE 239
>UniRef50_A1CQG7 Cluster: Translation regulator GCD7; n=8;
Eurotiomycetidae|Rep: Translation regulator GCD7 -
Aspergillus clavatus
Length = 440
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERF-LRPTQNRNCKVVVAE 158
EL + I + A +H+ ++EV+LT +S V++F L+ R VV AE
Sbjct: 213 ELGQVDDQIAAYALDHIHSNEVILTHTSSTTVQKFLLKAAAKRKFTVVHAE 263
>UniRef50_A0BG97 Cluster: Chromosome undetermined scaffold_105,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_105,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 342
Score = 31.5 bits (68), Expect = 4.1
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERF-LRPTQNRNCKVVVAEGTDVGESHA 185
E+E+ I + A H +EVLL + S V F L + RN +++V E
Sbjct: 134 EMESHSDDINTFASTHFFTNEVLLVYEYSTTVLNFLLSAKKTRNFEIIVLESETENLGKQ 193
Query: 186 MARRLSNSGVSVTVINSSCVFAV 254
A L ++VT+ + +A+
Sbjct: 194 FATDLGKHQLNVTLTPFTNAYAI 216
>UniRef50_UPI0000F2058B Cluster: PREDICTED: similar to Probable JmjC
domain-containing histone demethylation protein 2C
(Jumonji domain-containing protein 1C) (Thyroid
receptor-interacting protein 8) (TRIP-8); n=1; Danio
rerio|Rep: PREDICTED: similar to Probable JmjC
domain-containing histone demethylation protein 2C
(Jumonji domain-containing protein 1C) (Thyroid
receptor-interacting protein 8) (TRIP-8) - Danio rerio
Length = 2519
Score = 31.1 bits (67), Expect = 5.5
Identities = 17/65 (26%), Positives = 35/65 (53%)
Frame = +3
Query: 18 TMRSSITSQAREHVRADEVLLTFGASALVERFLRPTQNRNCKVVVAEGTDVGESHAMARR 197
++ ++I S+ ++ V+ADE +T G + + ++P ++NCK+ E + E +
Sbjct: 1501 SIATTICSEDKKSVKADEKPVTTGKKSFLLDNVKPVLDKNCKLEAKE--SIVEDKKSTEK 1558
Query: 198 LSNSG 212
SN G
Sbjct: 1559 HSNLG 1563
>UniRef50_Q62JF8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia mallei|Rep: Putative uncharacterized
protein - Burkholderia mallei (Pseudomonas mallei)
Length = 206
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +3
Query: 156 EGTDVGESHAMARRLSNSGVS----VTVINSSCVFAVCPXSXRWWXRCMLR 296
+G D+G S A+A R+ S T I C + + RW RC +R
Sbjct: 147 KGADIGMSDALAERIDTQSCSSRRFATSIRGVCGYRLAAVRCRWARRCPMR 197
>UniRef50_O01502 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 442
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +3
Query: 75 LLTFGASALVERFLRP--TQNRNCKVVVAE---GTDVGESHAMARR 197
L FG+ AL ERFLRP T + + V+E G+DV H ARR
Sbjct: 154 LAQFGSDALRERFLRPSITGDLVSSLAVSEPHAGSDVSAVHTHARR 199
>UniRef50_A4YW52 Cluster: Putative uncharacterized protein; n=1;
Bradyrhizobium sp. ORS278|Rep: Putative uncharacterized
protein - Bradyrhizobium sp. (strain ORS278)
Length = 1795
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 259 GHTANTHELLMTVTETPELLSRRAMA*LSPTSVPSATTTLQ 137
G HEL TV + P +++RRA+ P+ +P T+ Q
Sbjct: 290 GQRLIAHELAHTVQQRPNVIARRALDGAGPSEMPPTTSPEQ 330
>UniRef50_A4VP44 Cluster: EAL domain protein; n=3;
Proteobacteria|Rep: EAL domain protein - Pseudomonas
stutzeri (strain A1501)
Length = 417
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 87 GASALVERFLRPTQNRNCKVVVAEGTDVGESHAMARRLS 203
G AL +R + CKVV AEG + E AM RRL+
Sbjct: 358 GCRALAAALIRFAEETGCKVV-AEGVETQEELAMLRRLA 395
>UniRef50_Q4QHB9 Cluster: Translation initiation factor eIF-2B beta
subunit, putative; n=2; Leishmania|Rep: Translation
initiation factor eIF-2B beta subunit, putative -
Leishmania major
Length = 533
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/88 (20%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 RTELETMRSSITSQAREHVRADEVLLTFGASALVERFL--RPTQNRNCKVVVAEGTDV-- 170
+ ELE M + ++ + + + ++T G S + R+L + KV + EG +
Sbjct: 304 KRELEGMTEELCRRSTRQLHSSDTIITLGCSHTIRRYLLEAAQAGHHFKVFILEGAPLPA 363
Query: 171 GESHAMARRLSNSGVSVTVINSSCVFAV 254
+ A L + G++ ++ S + V
Sbjct: 364 QATQEFAEALCSRGITAQLLPDSSAYVV 391
>UniRef50_O74055 Cluster: Glucose-1-dehydrogenase; n=4;
Thermoprotei|Rep: Glucose-1-dehydrogenase - Cenarchaeum
symbiosum
Length = 592
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -2
Query: 185 GVTLADVSPFRDDDLAVPILGRPQEPLDQSA 93
G+ LA F ++ +V ILGR +EPLD++A
Sbjct: 16 GIGLAVARKFAENGASVVILGRRKEPLDEAA 46
>UniRef50_Q53217 Cluster: Uncharacterized short-chain type
dehydrogenase/reductase y4vI; n=5; Proteobacteria|Rep:
Uncharacterized short-chain type dehydrogenase/reductase
y4vI - Rhizobium sp. (strain NGR234)
Length = 548
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 111 FLRPTQNRNCKVVVAEGTDVGESHAMARRLSNSGVSVTV 227
F+RP ++ + + V+ G G A+ARR + +G +V +
Sbjct: 268 FMRPVEDTDARTVIVMGGATGVGAAIARRFAENGDTVVI 306
>UniRef50_Q1RLR5 Cluster: B-cell CLL/lymphoma 11A; n=6;
Euteleostomi|Rep: B-cell CLL/lymphoma 11A - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 829
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 200 QPPCHGVTLADVSPFRDDDLAVPILGRPQEPLDQSAGP 87
QPP HG+ L + SPF + L +P GR PL + P
Sbjct: 192 QPPLHGIHLPEGSPF--NLLRIPNSGRDGPPLREGRFP 227
>UniRef50_Q98A91 Cluster: Transcriptional regulator; n=2;
Mesorhizobium loti|Rep: Transcriptional regulator -
Rhizobium loti (Mesorhizobium loti)
Length = 241
Score = 30.3 bits (65), Expect = 9.5
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = +3
Query: 60 RADEVLLTFGASALVERFLRPT-QNRNCKVVVAEGTDVGESHAMARRLSNSGVSVTVINS 236
R +TF A L FLR Q ++A +G +AR L+ GVS+T
Sbjct: 125 RGGVAAMTFAADRLDPTFLRVAEQYEQALEIMAMCFHIGVRRKLARGLAVDGVSLTPREY 184
Query: 237 SCVFAVCPXSXRWWXRCML 293
C+ W C+L
Sbjct: 185 ECLEWTAKGKSAWEIGCIL 203
>UniRef50_Q01GA5 Cluster: Endomembrane protein 70, putative; n=2;
Ostreococcus|Rep: Endomembrane protein 70, putative -
Ostreococcus tauri
Length = 641
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 219 VTVINSSCVFAVCPXSXRWWXRCMLRXGXCAV 314
+TV+ C F +C RWW R L G AV
Sbjct: 550 ITVV--MCYFQLCAEDYRWWWRSFLTSGASAV 579
>UniRef50_Q0U062 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 526
Score = 30.3 bits (65), Expect = 9.5
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 7/110 (6%)
Frame = +3
Query: 6 TELETMRSSITSQAREHVRAD--EVLLTFGASALVE-RFLRPTQNRNCKVVVAEGTDVGE 176
T + SITS + RA +++ A ++V F+ P Q T +G
Sbjct: 394 TPFTVILQSITSPSARGARATVWAIIVVVQALSVVSGTFVLPAQIMLTNNASPHPTALGR 453
Query: 177 SHAMARRLSNSGVSVTVINSSCVFAVCPX----SXRWWXRCMLRXGXCAV 314
+H+ A LS+ S++ + V WW CM+ G C +
Sbjct: 454 THSAAVLLSSFSRSISPMLGGAVLGYSSERGMTELAWWLMCMVALGGCGL 503
>UniRef50_O58185 Cluster: Putative translation initiation factor
eIF-2B subunit 2-like; n=4; Thermococcaceae|Rep:
Putative translation initiation factor eIF-2B subunit
2-like - Pyrococcus horikoshii
Length = 276
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +3
Query: 12 LETMRSSITSQAREHVRADEVLLTFGASALVERFLRPTQNRN--CKVVVAEGTDVGESHA 185
+E + + S + + +V++T S+ V +R + R KV++ E + E
Sbjct: 92 MEEAKRELASIGAQLIDDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTESSPDYEGLH 151
Query: 186 MARRLSNSGVSVTVINSSCVFAVC 257
+AR L SG+ VI + + C
Sbjct: 152 LARELEFSGIEFEVITDAQMGLFC 175
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,602,243
Number of Sequences: 1657284
Number of extensions: 4776175
Number of successful extensions: 13378
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 13015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13360
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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