Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0357.Seq
         (348 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    26   0.35 
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    26   0.46 
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    26   0.46 
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   4.3  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    22   5.7  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         21   9.9  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         21   9.9  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           21   9.9  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -3

Query: 292 SMHLXHHLXDXGHTANTHELLMTVTETPELLSRRAMA*LSPTSVPSATTTL 140
           SM L HH    GH A  H  L   T     L++ A+A  + + VPS + ++
Sbjct: 345 SMGLHHH--HPGHHAALHAHLGVPTSQHHQLNQAAVAAAAASQVPSTSLSI 393


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 172  PTSVPSATTTLQFLFWVGLRNRSTRA 95
            P    +  TT Q +FW+GLR    R+
Sbjct: 1804 PDHAVTRCTTCQTVFWIGLRKHHCRS 1829


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 172  PTSVPSATTTLQFLFWVGLRNRSTRA 95
            P    +  TT Q +FW+GLR    R+
Sbjct: 1805 PDHAVTRCTTCQTVFWIGLRKHHCRS 1830


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 168 VGESHAMARRLSNSGVSVTVINSSCVFAVCP 260
           VGE+ +  RR  N G+ + +   S   A+ P
Sbjct: 146 VGETISKVRRAQNGGMLLELKQGSSASAIAP 176


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 106 SGS*GRPRIGTARSSSRKGLTSARVTPW 189
           SG+ G    G   SSS+KG     + PW
Sbjct: 236 SGTEGGSSQGGGGSSSKKGGPPPHIYPW 263


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/18 (38%), Positives = 8/18 (44%)
 Frame = -3

Query: 325 ESPRTAXXPHRSMHLXHH 272
           + P  A  PH   H  HH
Sbjct: 84  DGPMPAQPPHHHQHPHHH 101


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/18 (38%), Positives = 8/18 (44%)
 Frame = -3

Query: 325 ESPRTAXXPHRSMHLXHH 272
           + P  A  PH   H  HH
Sbjct: 84  DGPMPAQPPHHHQHPHHH 101


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 326 RVPKDRAXPXSQHAPXPP 273
           RVP++ A     HAP  P
Sbjct: 61  RVPREHATSSPYHAPPSP 78


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 306,640
Number of Sequences: 2352
Number of extensions: 4726
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24935070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)