Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0357.Seq
(348 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L40395-1|AAC42002.1| 346|Homo sapiens protein ( Homo sapiens (c... 64 1e-10
BC011750-1|AAH11750.1| 351|Homo sapiens eukaryotic translation ... 64 1e-10
BC003165-1|AAH03165.1| 351|Homo sapiens eukaryotic translation ... 64 1e-10
BC000494-1|AAH00494.1| 351|Homo sapiens eukaryotic translation ... 64 1e-10
AF035280-1|AAB88176.1| 351|Homo sapiens protein ( Homo sapiens ... 64 1e-10
AC006530-5|AAD30183.1| 351|Homo sapiens EIF-2B protein. 64 1e-10
AF355097-1|AAK39098.1| 188|Homo sapiens CDRT15 protein protein. 33 0.19
>L40395-1|AAC42002.1| 346|Homo sapiens protein ( Homo sapiens
(clone S20iii15) mRNA, 3' end of cds. ).
Length = 346
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERFLR-PTQNRNCKVVVAEGTDVGESHA 185
ELE +I +QA EH+ ++EV++T G S VE FL+ + R V+VAE + H
Sbjct: 137 ELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFHVIVAECAPFCQGHE 196
Query: 186 MARRLSNSGVSVTVINSSCVFAV 254
MA LS +G+ TV+ + +FAV
Sbjct: 197 MAVNLSKAGIETTVMTDAAIFAV 219
>BC011750-1|AAH11750.1| 351|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 2 beta, 39kDa protein.
Length = 351
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERFLR-PTQNRNCKVVVAEGTDVGESHA 185
ELE +I +QA EH+ ++EV++T G S VE FL+ + R V+VAE + H
Sbjct: 143 ELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFHVIVAECAPFCQGHE 202
Query: 186 MARRLSNSGVSVTVINSSCVFAV 254
MA LS +G+ TV+ + +FAV
Sbjct: 203 MAVNLSKAGIETTVMTDAAIFAV 225
>BC003165-1|AAH03165.1| 351|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 2 beta, 39kDa protein.
Length = 351
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERFLR-PTQNRNCKVVVAEGTDVGESHA 185
ELE +I +QA EH+ ++EV++T G S VE FL+ + R V+VAE + H
Sbjct: 143 ELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFHVIVAECAPFCQGHE 202
Query: 186 MARRLSNSGVSVTVINSSCVFAV 254
MA LS +G+ TV+ + +FAV
Sbjct: 203 MAVNLSKAGIETTVMTDAAIFAV 225
>BC000494-1|AAH00494.1| 351|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 2 beta, 39kDa protein.
Length = 351
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERFLR-PTQNRNCKVVVAEGTDVGESHA 185
ELE +I +QA EH+ ++EV++T G S VE FL+ + R V+VAE + H
Sbjct: 143 ELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFHVIVAECAPFCQGHE 202
Query: 186 MARRLSNSGVSVTVINSSCVFAV 254
MA LS +G+ TV+ + +FAV
Sbjct: 203 MAVNLSKAGIETTVMTDAAIFAV 225
>AF035280-1|AAB88176.1| 351|Homo sapiens protein ( Homo sapiens
clone 23689 mRNA, complete cds. ).
Length = 351
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERFLR-PTQNRNCKVVVAEGTDVGESHA 185
ELE +I +QA EH+ ++EV++T G S VE FL+ + R V+VAE + H
Sbjct: 143 ELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFHVIVAECAPFCQGHE 202
Query: 186 MARRLSNSGVSVTVINSSCVFAV 254
MA LS +G+ TV+ + +FAV
Sbjct: 203 MAVNLSKAGIETTVMTDAAIFAV 225
>AC006530-5|AAD30183.1| 351|Homo sapiens EIF-2B protein.
Length = 351
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 ELETMRSSITSQAREHVRADEVLLTFGASALVERFLR-PTQNRNCKVVVAEGTDVGESHA 185
ELE +I +QA EH+ ++EV++T G S VE FL+ + R V+VAE + H
Sbjct: 143 ELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFHVIVAECAPFCQGHE 202
Query: 186 MARRLSNSGVSVTVINSSCVFAV 254
MA LS +G+ TV+ + +FAV
Sbjct: 203 MAVNLSKAGIETTVMTDAAIFAV 225
>AF355097-1|AAK39098.1| 188|Homo sapiens CDRT15 protein protein.
Length = 188
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = -3
Query: 244 THELLMTVTETPELLSRRAMA*LSPTSVPSATTTLQFLFWVGLRNRSTRALAPNV 80
T+E L +TE PE + RR + P + P+ L W+ + + ++R APNV
Sbjct: 129 TNEELPEITEVPESIKRR-LGRRVPAATPAPRGNLLLQAWMRVHSWASRLFAPNV 182
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,430,736
Number of Sequences: 237096
Number of extensions: 777404
Number of successful extensions: 1739
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1732
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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