Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0355.Seq
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   2.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   2.3  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   9.4  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   9.4  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   9.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.4  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 133 LDKLKAERERGITIDIALWKFETSKYYVTII 225
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 78  LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 108


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 133 LDKLKAERERGITIDIALWKFETSKYYVTII 225
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 4   LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 34


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/17 (29%), Positives = 8/17 (47%)
 Frame = -2

Query: 52  HHICRSSDQWWWTCRSR 2
           HH+  +   WW    S+
Sbjct: 88  HHLIENKPNWWQELESK 104


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 4/11 (36%), Positives = 7/11 (63%)
 Frame = -2

Query: 52  HHICRSSDQWW 20
           HH+ ++   WW
Sbjct: 88  HHLIKNKPNWW 98


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/17 (29%), Positives = 8/17 (47%)
 Frame = -2

Query: 52  HHICRSSDQWWWTCRSR 2
           HH+  +   WW    S+
Sbjct: 88  HHLIENKPNWWQELESK 104


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/19 (31%), Positives = 9/19 (47%)
 Frame = -3

Query: 486 CMRILPSXFPQIWAHCMVV 430
           C    P+    +W+HC  V
Sbjct: 137 CQVCTPNATNTVWSHCQCV 155


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/19 (31%), Positives = 9/19 (47%)
 Frame = -3

Query: 486 CMRILPSXFPQIWAHCMVV 430
           C    P+    +W+HC  V
Sbjct: 137 CQVCTPNATNTVWSHCQCV 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,011
Number of Sequences: 336
Number of extensions: 2863
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)