Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0355.Seq
(548 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 166 1e-41
03_01_0547 + 4093196-4093657,4094267-4095148 166 1e-41
03_01_0544 + 4082528-4082989,4083585-4084466 166 1e-41
03_01_0543 + 4076981-4077442,4078145-4079026 166 1e-41
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 104 4e-23
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 104 4e-23
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 85 5e-17
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 83 1e-16
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 74 9e-14
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 46 2e-05
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 46 2e-05
02_04_0462 + 23131433-23132836 45 3e-05
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 40 0.001
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 40 0.001
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 36 0.021
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 34 0.065
03_05_0511 + 25056018-25059107 34 0.065
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 33 0.11
02_04_0148 - 20198407-20201424 33 0.15
04_01_0103 + 1082077-1082167,1083037-1085477 29 2.4
02_04_0017 + 18937774-18937864,18938505-18940945 29 2.4
01_01_0016 - 88825-90411 29 2.4
09_06_0237 + 21788886-21789965 28 4.3
06_03_1457 - 30287185-30287287,30287691-30287759,30288212-302883... 27 7.5
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 27 9.9
02_05_1118 + 34241819-34242217,34242350-34242522,34243499-342436... 27 9.9
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 166 bits (403), Expect = 1e-41
Identities = 76/85 (89%), Positives = 79/85 (92%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 180
VDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDI
Sbjct: 16 VDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDI 75
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIK 255
ALWKFET+KYY T+IDAPGHRDFIK
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIK 100
Score = 122 bits (295), Expect = 1e-28
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQXIVGVNKMDS 425
F +NMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ I NKMD+
Sbjct: 98 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Query: 426 TEPPYSEPRFEEXKKEVSSYIQE 494
T P YS+ R++E KEVSSY+++
Sbjct: 158 TTPKYSKARYDEIVKEVSSYLKK 180
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 166 bits (403), Expect = 1e-41
Identities = 76/85 (89%), Positives = 79/85 (92%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 180
VDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDI
Sbjct: 16 VDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDI 75
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIK 255
ALWKFET+KYY T+IDAPGHRDFIK
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIK 100
Score = 122 bits (295), Expect = 1e-28
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQXIVGVNKMDS 425
F +NMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ I NKMD+
Sbjct: 98 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Query: 426 TEPPYSEPRFEEXKKEVSSYIQE 494
T P YS+ R++E KEVSSY+++
Sbjct: 158 TTPKYSKARYDEIVKEVSSYLKK 180
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 166 bits (403), Expect = 1e-41
Identities = 76/85 (89%), Positives = 79/85 (92%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 180
VDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDI
Sbjct: 16 VDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDI 75
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIK 255
ALWKFET+KYY T+IDAPGHRDFIK
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIK 100
Score = 122 bits (295), Expect = 1e-28
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQXIVGVNKMDS 425
F +NMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ I NKMD+
Sbjct: 98 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Query: 426 TEPPYSEPRFEEXKKEVSSYIQE 494
T P YS+ R++E KEVSSY+++
Sbjct: 158 TTPKYSKARYDEIVKEVSSYLKK 180
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 166 bits (403), Expect = 1e-41
Identities = 76/85 (89%), Positives = 79/85 (92%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 180
VDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDI
Sbjct: 16 VDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDI 75
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIK 255
ALWKFET+KYY T+IDAPGHRDFIK
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIK 100
Score = 122 bits (295), Expect = 1e-28
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQXIVGVNKMDS 425
F +NMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ I NKMD+
Sbjct: 98 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Query: 426 TEPPYSEPRFEEXKKEVSSYIQE 494
T P YS+ R++E KEVSSY+++
Sbjct: 158 TTPKYSKARYDEIVKEVSSYLKK 180
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 104 bits (250), Expect = 4e-23
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 180
VDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+ ERERG+T+ +
Sbjct: 256 VDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERERGVTMTV 315
Query: 181 ALWKFETSKYYVTIIDAPGHRDFI 252
A+ ET KY V ++D+PGH+DF+
Sbjct: 316 AVAYLETKKYRVVLLDSPGHKDFV 339
Score = 74.9 bits (176), Expect = 4e-14
Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 5/87 (5%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTREHALLAFTLGVKQXIVGV 410
F NMI+G +QAD A+L+V A TG FEAG+ GQT+EHA L + GV+Q IV V
Sbjct: 338 FVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAV 397
Query: 411 NKMDSTEPPYSEPRFEEXKKEVSSYIQ 491
NKMD+ YS+ RFE K ++ S+++
Sbjct: 398 NKMDAI--GYSKERFEFIKVQLGSFLR 422
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 104 bits (250), Expect = 4e-23
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 180
VDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+ ERERG+T+ +
Sbjct: 256 VDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERERGVTMTV 315
Query: 181 ALWKFETSKYYVTIIDAPGHRDFI 252
A+ ET KY V ++D+PGH+DF+
Sbjct: 316 AVAYLETKKYRVVLLDSPGHKDFV 339
Score = 74.9 bits (176), Expect = 4e-14
Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 5/87 (5%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTREHALLAFTLGVKQXIVGV 410
F NMI+G +QAD A+L+V A TG FEAG+ GQT+EHA L + GV+Q IV V
Sbjct: 338 FVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAV 397
Query: 411 NKMDSTEPPYSEPRFEEXKKEVSSYIQ 491
NKMD+ YS+ RFE K ++ S+++
Sbjct: 398 NKMDAI--GYSKERFEFIKVQLGSFLR 422
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 84.6 bits (200), Expect = 5e-17
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +3
Query: 255 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQXIVGVNKMDSTEP 434
NMI+G SQAD VL+++A GEFE G K GQTREH LLA TLGV + IV +NKMD
Sbjct: 92 NMISGASQADIGVLVISARKGEFETGYEKGGQTREHVLLAKTLGVAKLIVVINKMDEPTV 151
Query: 435 PYSEPRFEEXKKEVSSYIQ 491
+S+ R++E + ++ +++
Sbjct: 152 KWSKERYDEIESKMVPFLR 170
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Frame = +1
Query: 4 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIA 183
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G T+++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 184 LWKFETSKYYVTIIDAP----GHRDFI 252
FET TI+DAP GH+ ++
Sbjct: 64 RAHFETETTRFTILDAPVKMKGHKSYV 90
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/79 (46%), Positives = 56/79 (70%)
Frame = +3
Query: 255 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQXIVGVNKMDSTEP 434
NMI+G SQAD VL+++A GEFE G + GQTREH LLA TLGV + +V +NKMD +
Sbjct: 47 NMISGASQADIGVLVISARKGEFETGYERGGQTREHVLLAKTLGVSKLVVVINKMDESTV 106
Query: 435 PYSEPRFEEXKKEVSSYIQ 491
+S+ R++E + ++ +++
Sbjct: 107 GWSKERYDEIEGKMVPFLK 125
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 160 RGITIDIALWKFETSKYYVTIIDAPGHRDFI 252
+G T+++ FET TI+DAPGH+ ++
Sbjct: 15 KGKTVEVGRAHFETETTRFTILDAPGHKSYV 45
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 73.7 bits (173), Expect = 9e-14
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNG--QTREHALLAFTLGVKQXIVGVNKM 419
F NMI+G +Q+D A+L++ A G FEAG+ NG QT+EH+ L + GV IV VNKM
Sbjct: 325 FVPNMISGATQSDAAILVIDASIGSFEAGMGINGIGQTKEHSQLVRSFGVDNLIVVVNKM 384
Query: 420 DSTEPPYSEPRFEEXKKEVSSYIQ 491
DS E YS+ RF K ++ ++++
Sbjct: 385 DSVE--YSKERFNFIKSQLGAFLR 406
Score = 69.3 bits (162), Expect = 2e-12
Identities = 26/51 (50%), Positives = 39/51 (76%)
Frame = +1
Query: 100 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 252
+GKGSF YAW +D+ ERERGIT+ + + F+T Y+V ++D+PGH+DF+
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFV 326
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/89 (32%), Positives = 45/89 (50%)
Frame = +3
Query: 219 HH*CSWTQRFHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQX 398
H C + +NMITG +Q D +L+V+A G QT+EH LLA +GV
Sbjct: 134 HVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMP-------QTKEHILLARQVGVPSL 186
Query: 399 IVGVNKMDSTEPPYSEPRFEEXKKEVSSY 485
+ +NK+D+ + P E +E+ S+
Sbjct: 187 VCFLNKVDAVDDPELLELVEMELRELLSF 215
Score = 44.0 bits (99), Expect = 8e-05
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +1
Query: 85 KEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIK 255
K E GK +DK E+ RGITI A ++ET+K + +D PGH D++K
Sbjct: 89 KVLAEAGKAKAVAFDEIDKAPEEKARGITIATAHVEYETAKRHYAHVDCPGHADYVK 145
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 46.0 bits (104), Expect = 2e-05
Identities = 32/83 (38%), Positives = 43/83 (51%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 180
+DSGK+T T ++Y G I E E ++ G G+ +D + ERE+GITI
Sbjct: 77 IDSGKTTLTERVLYYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLEREKGITIQS 126
Query: 181 ALWKFETSKYYVTIIDAPGHRDF 249
A + Y V IID PGH DF
Sbjct: 127 AATYCTWNGYQVNIIDTPGHVDF 149
>02_04_0462 + 23131433-23132836
Length = 467
Score = 45.2 bits (102), Expect = 3e-05
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +3
Query: 219 HH*CSWTQRFHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQX 398
H C + +NMITG +Q D A+L+V+ G QT+EH LLA +GV +
Sbjct: 137 HVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPKI 189
Query: 399 IVGVNKMDSTEPPYSEPRFE-EXKKEVSSY 485
+V +NK D + E E ++ +SSY
Sbjct: 190 VVFLNKKDQVDDEELLQLVELEVRELLSSY 219
Score = 41.1 bits (92), Expect = 6e-04
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 133 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIK 255
+D ER RGITI+ A ++ET + +D PGH D++K
Sbjct: 108 IDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVK 148
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/83 (34%), Positives = 44/83 (53%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 180
+D+GK+TTT ++Y G K I +F+ +G+ W ++ E+ERGITI
Sbjct: 113 IDAGKTTTTERVLYYTGRNYK--IGEFQ-------EGTVTMDW----MEQEQERGITITS 159
Query: 181 ALWKFETSKYYVTIIDAPGHRDF 249
+K+ + IID PGH DF
Sbjct: 160 PPTTAFWNKHRINIIDTPGHVDF 182
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 39.9 bits (89), Expect = 0.001
Identities = 42/123 (34%), Positives = 54/123 (43%), Gaps = 4/123 (3%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 180
+D GKST L+ G + KR EM K F LD + ERERGITI +
Sbjct: 86 IDHGKSTLADKLLELTGTVQKR----------EM-KQQF-----LDNMDLERERGITIKL 129
Query: 181 AL----WKFETSKYYVTIIDAPGHRDFIKT*SQEPLRLIALCSS*LPVPVNSKLVSLRTV 348
+ Y + +ID PGH DF S E R +A C L V S+ V +T+
Sbjct: 130 QAARMRYIMNDEPYCLNLIDTPGHVDF----SYEVSRSLAACEGALLVVDASQGVEAQTL 185
Query: 349 KPV 357
V
Sbjct: 186 ANV 188
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 35.9 bits (79), Expect = 0.021
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 133 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 249
+D + ERERGITI + + + ++D PGH DF
Sbjct: 98 MDSISLERERGITIASKVTSVSWKENELNMVDTPGHADF 136
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 34.3 bits (75), Expect = 0.065
Identities = 42/131 (32%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 180
VD GKST L+ G I K G G +Y LDKL+ ERERGIT+
Sbjct: 66 VDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERERGITVKA 109
Query: 181 ---------------ALWKFETSKYYVTIIDAPGHRDFIKT*SQEPLRLIALCSS*LPVP 315
A + + Y + +ID PGH DF S E R +A C L V
Sbjct: 110 QTATMFYRHANNQLPASDQPDAPSYLLNLIDTPGHVDF----SYEVSRSLAACQGALLVV 165
Query: 316 VNSKLVSLRTV 348
++ V +T+
Sbjct: 166 DAAQGVQAQTI 176
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 34.3 bits (75), Expect = 0.065
Identities = 25/83 (30%), Positives = 36/83 (43%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 180
VD GK+T HL+ CG + G ++ +D L E+ R IT+
Sbjct: 19 VDHGKTTLADHLVASCG----------DGLVHPRLAGRLRF---MDYLDEEQRRAITMKS 65
Query: 181 ALWKFETSKYYVTIIDAPGHRDF 249
A + V +ID+PGH DF
Sbjct: 66 AAVVLHHGGHRVNLIDSPGHIDF 88
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 130 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 249
++D ERERGITI + IID PGH DF
Sbjct: 156 IMDSNDLERERGITILSKNTSITYKGTKINIIDTPGHSDF 195
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 33.1 bits (72), Expect = 0.15
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI-- 174
VD GK++ HLI G E+ E GS A V+D L+ E+ R IT+
Sbjct: 25 VDHGKTSLADHLIAAYGS---------ERRVSERMAGS---ARVMDHLEEEQRRAITMKS 72
Query: 175 -DIALWKF--ETSKYYVTIIDAPGHRDF 249
IAL + + + V +ID+PGH DF
Sbjct: 73 ASIALRRGGEDGGGHRVHLIDSPGHIDF 100
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 29.1 bits (62), Expect = 2.4
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLKAERERGI 168
VD GKST T L+ G I + + + A E +G + K + + E
Sbjct: 28 VDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLFYEMSDE--- 84
Query: 169 TIDIALWKFET--SKYYVTIIDAPGHRDF 249
+ L+K E ++Y + +ID+PGH DF
Sbjct: 85 --SLKLYKGERDGNEYLINLIDSPGHVDF 111
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 29.1 bits (62), Expect = 2.4
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLKAERERGI 168
VD GKST T L+ G I + + + A E +G + K + + E
Sbjct: 28 VDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLFYEMSDE--- 84
Query: 169 TIDIALWKFET--SKYYVTIIDAPGHRDF 249
+ L+K E ++Y + +ID+PGH DF
Sbjct: 85 --SLKLYKGERDGNEYLINLIDSPGHVDF 111
>01_01_0016 - 88825-90411
Length = 528
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 404 YDXLFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSA 285
YD F + +G+L L+V+ F+ TGT + D+H A
Sbjct: 241 YDAAF--RDHARRGLLPALSVIEPRYFDLTGTPADDDHPA 278
>09_06_0237 + 21788886-21789965
Length = 359
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 231 SWTQRFHQNMITGTSQADCAVLIVAAGTGEF 323
SW + F + ++ SQ DC +V G G F
Sbjct: 265 SWNETFPRELVAAHSQYDCPGNLVYVGDGRF 295
>06_03_1457 -
30287185-30287287,30287691-30287759,30288212-30288351,
30288447-30288641,30288743-30289363,30289688-30290257,
30290332-30293638,30293764-30293863,30293978-30295014,
30295256-30295604,30296299-30296374,30296456-30297022,
30297094-30297238,30298281-30298405,30298491-30298582,
30298646-30298828,30298946-30299058,30299499-30299649,
30299720-30299882
Length = 2701
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 272 GSCDHVLMKSLCPGASMMVT*YLLVSNFQRAI 177
G+C H L S CPG + +T +V+ FQRA+
Sbjct: 285 GACLHALHSS-CPGYIVAITASDIVNVFQRAV 315
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 470 LLXFLKSGLTVWWFSGIHFVY 408
+L GL VW GIHFVY
Sbjct: 234 ILEIKTGGLVVWTRGGIHFVY 254
>02_05_1118 +
34241819-34242217,34242350-34242522,34243499-34243660,
34243762-34243903,34244320-34244544,34244649-34244711,
34244817-34244891,34245198-34245404,34247274-34247465,
34247515-34247634
Length = 585
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 180
V S S T L+ + G D +++ ++A ++ + + V D + RE+G T+D+
Sbjct: 428 VFSKSSRETAKLVARWFGPDSDELKRMSEKALKLAQPEAVFDIVRDIHELSREQGPTVDV 487
Query: 181 AL 186
+
Sbjct: 488 TI 489
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,749,233
Number of Sequences: 37544
Number of extensions: 321851
Number of successful extensions: 798
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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