Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0355.Seq
(548 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 186 1e-49
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 184 7e-49
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 157 9e-41
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 157 9e-41
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 3.6
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 8.2
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 8.2
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 8.2
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 8.2
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 8.2
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 8.2
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 8.2
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 186 bits (454), Expect = 1e-49
Identities = 107/186 (57%), Positives = 118/186 (63%), Gaps = 5/186 (2%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 180
VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI
Sbjct: 16 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 75
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIKT----*SQEPLRLIALCSS*LPVPVN-SKLVSLRT 345
ALWKFETSKYYVTIIDAPGHRDFIK SQ ++ + + SK R
Sbjct: 76 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 135
Query: 346 VKPVSMPCXXXXXXXXXXXXE*TKWIPLNHHTVSPDLRKXRRKYPHTFKKIGLQPTDDXF 525
++ + T+ P T +++K Y KKIG P F
Sbjct: 136 HALLAFTLGVKQLIVGVNKMDSTE--PPYSETRFEEIKKEVSSY---IKKIGYNPAAVAF 190
Query: 526 VPISGW 543
VPISGW
Sbjct: 191 VPISGW 196
Score = 157 bits (380), Expect = 9e-41
Identities = 76/83 (91%), Positives = 79/83 (95%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQXIVGVNKMDS 425
F +NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ IVGVNKMDS
Sbjct: 98 FIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 157
Query: 426 TEPPYSEPRFEEXKKEVSSYIQE 494
TEPPYSE RFEE KKEVSSYI++
Sbjct: 158 TEPPYSETRFEEIKKEVSSYIKK 180
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 184 bits (447), Expect = 7e-49
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 180
VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI
Sbjct: 16 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 75
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIK 255
ALWKFET+KYYVTIIDAPGHRDFIK
Sbjct: 76 ALWKFETAKYYVTIIDAPGHRDFIK 100
Score = 151 bits (366), Expect = 5e-39
Identities = 73/83 (87%), Positives = 77/83 (92%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQXIVGVNKMDS 425
F +NMITGTSQADCAVLIVAAG GEFEAGISKNGQTREHALLAFTLGVKQ IVGVNKMD
Sbjct: 98 FIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDM 157
Query: 426 TEPPYSEPRFEEXKKEVSSYIQE 494
T+PPYSE RFEE KKEVSSYI++
Sbjct: 158 TDPPYSEARFEEIKKEVSSYIKK 180
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 157 bits (380), Expect = 9e-41
Identities = 76/83 (91%), Positives = 79/83 (95%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQXIVGVNKMDS 425
F +NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ IVGVNKMDS
Sbjct: 25 FIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 84
Query: 426 TEPPYSEPRFEEXKKEVSSYIQE 494
TEPPYSE RFEE KKEVSSYI++
Sbjct: 85 TEPPYSETRFEEIKKEVSSYIKK 107
Score = 64.9 bits (151), Expect = 5e-13
Identities = 49/128 (38%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
Frame = +1
Query: 175 DIALWKFETSKYYVTIIDAPGHRDFIKT----*SQEPLRLIALCSS*LPVPVN-SKLVSL 339
DIALWKFETSKYYVTIIDAPGHRDFIK SQ ++ + + SK
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 340 RTVKPVSMPCXXXXXXXXXXXXE*TKWIPLNHHTVSPDLRKXRRKYPHTFKKIGLQPTDD 519
R ++ + T+ P T +++K Y KKIG P
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTE--PPYSETRFEEIKKEVSSY---IKKIGYNPAAV 115
Query: 520 XFVPISGW 543
FVPISGW
Sbjct: 116 AFVPISGW 123
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 157 bits (380), Expect = 9e-41
Identities = 76/83 (91%), Positives = 79/83 (95%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQXIVGVNKMDS 425
F +NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ IVGVNKMDS
Sbjct: 41 FIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 100
Query: 426 TEPPYSEPRFEEXKKEVSSYIQE 494
TEPPYSE RFEE KKEVSSYI++
Sbjct: 101 TEPPYSETRFEEIKKEVSSYIKK 123
Score = 97.9 bits (233), Expect = 6e-23
Identities = 65/144 (45%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Frame = +1
Query: 127 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKT----*SQEPLRLIALC 294
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIK SQ ++ +
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 295 SS*LPVPVN-SKLVSLRTVKPVSMPCXXXXXXXXXXXXE*TKWIPLNHHTVSPDLRKXRR 471
+ SK R ++ + T+ P T +++K
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE--PPYSETRFEEIKKEVS 118
Query: 472 KYPHTFKKIGLQPTDDXFVPISGW 543
Y KKIG P FVPISGW
Sbjct: 119 SY---IKKIGYNPAAVAFVPISGW 139
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 22.2 bits (45), Expect = 3.6
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 214 VTIIDAPGHRDFI 252
VT +D PGH FI
Sbjct: 195 VTFLDTPGHAAFI 207
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.0 bits (42), Expect = 8.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -3
Query: 498 NLLECMRILPSXFPQIWAHCMVVQWNPFCLL 406
+LL + LP IW+H V FC++
Sbjct: 99 DLLLLISGLPPEIYYIWSHFPYVFGEAFCII 129
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 58 DKRTIEKFEKEAQEMG 105
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 8.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 359 LTGLTVLRDTSFEFTGTGSYDEHSAISLR 273
LTGLTVLR + + S E S R
Sbjct: 257 LTGLTVLRTFNASYNSLDSLPEGLFASTR 285
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 58 DKRTIEKFEKEAQEMG 105
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 58 DKRTIEKFEKEAQEMG 105
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.0 bits (42), Expect = 8.2
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 418 WIPLNHHTVSPDLRKXRRKY 477
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 470 LLXFLKSGLTVWWFSGIH 417
L F++SG+T W S I+
Sbjct: 56 LSHFIESGITAIWLSPIN 73
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,800
Number of Sequences: 438
Number of extensions: 3451
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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