Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0354.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   4.3  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   5.7  
AF185643-1|AAF15578.1|  117|Anopheles gambiae Toll-related prote...    23   5.7  
L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase pro...    23   7.5  
AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase p...    23   7.5  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    23   9.9  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 533  RRCSKCKAXDYSLHKAXL 480
            RRC +CK   Y  H+  L
Sbjct: 1014 RRCDRCKENKYDRHQGCL 1031


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
 Frame = +3

Query: 138  PLYFLLL-YRTF----HETRNAFKIENSNKNCYNILNKTFIKKKYC*YE 269
            P Y L L YR F    +   N  +   S++    +L++ FIK ++C +E
Sbjct: 1111 PSYKLCLHYRDFPVGAYIADNILQAVESSRRTIMVLSENFIKSEWCRFE 1159


>AF185643-1|AAF15578.1|  117|Anopheles gambiae Toll-related protein
           protein.
          Length = 117

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
 Frame = +3

Query: 138 PLYFLLL-YRTF----HETRNAFKIENSNKNCYNILNKTFIKKKYC*YE 269
           P Y L L YR F    +   N  +   S++    +L++ FIK ++C +E
Sbjct: 25  PSYKLCLHYRDFPVGAYIADNILQAVESSRRTIMVLSENFIKSEWCRFE 73


>L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = -3

Query: 125 HFVLVASTPQSPYRSGRGTFLIITPKYFCVS*YYPM 18
           H +L+   P+ P   G+G  +   P  +    Y P+
Sbjct: 7   HLLLLLDRPREPVFMGKGRVVFDVPDNYLTDRYRPI 42


>AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = -3

Query: 125 HFVLVASTPQSPYRSGRGTFLIITPKYFCVS*YYPM 18
           H +L+   P+ P   G+G  +   P  +    Y P+
Sbjct: 7   HLLLLLDRPREPVFMGKGRVVFDVPDNYLTDRYRPI 42


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = +3

Query: 180 RNAFKIENSNKNCYNILNKTFIKKKYC 260
           RN F +  SN+NC     +    +  C
Sbjct: 140 RNNFHLPKSNRNCRTAARRNHSSRNTC 166


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,556
Number of Sequences: 2352
Number of extensions: 8431
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)