Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0353.Seq
         (508 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes ...    63   3e-09
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ...    42   0.006
UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;...    42   0.011
UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus tropicalis|...    36   0.53 
UniRef50_Q6Z8F1 Cluster: Putative uncharacterized protein P0459B...    36   0.70 
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    35   0.92 
UniRef50_Q0FI72 Cluster: Putative uncharacterized protein; n=1; ...    33   3.7  
UniRef50_UPI000155C054 Cluster: PREDICTED: similar to KIAA1862 p...    33   4.9  
UniRef50_Q2Z1Y7 Cluster: Pm27 protein; n=1; Prunus mume|Rep: Pm2...    33   4.9  
UniRef50_Q9ZVV9 Cluster: Putative uncharacterized protein At2g07...    32   6.5  
UniRef50_A4RKZ9 Cluster: Putative uncharacterized protein; n=3; ...    32   6.5  
UniRef50_A2D9Z7 Cluster: Putative uncharacterized protein; n=1; ...    32   8.6  

>UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes
           scapularis|Rep: Putative secreted protein - Ixodes
           scapularis (Black-legged tick) (Deer tick)
          Length = 65

 Score = 63.3 bits (147), Expect = 3e-09
 Identities = 30/53 (56%), Positives = 35/53 (66%)
 Frame = +3

Query: 54  PY*GDTANGSIYQFWFLRSYSVTWITVVILELIHAIRTLTSDGMSAFIRSKPI 212
           P  G+TANGS+ Q WFLRS+  TWITV ILELIHA+         AFIR + I
Sbjct: 2   PKQGETANGSLNQLWFLRSFLPTWITVAILELIHAVSPKPLGATGAFIRPRSI 54


>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
           LRRG00114 - Rattus norvegicus (Rat)
          Length = 223

 Score = 42.3 bits (95), Expect = 0.006
 Identities = 19/22 (86%), Positives = 19/22 (86%)
 Frame = -1

Query: 430 LPSLDVVAVSQXPXPESNPDSP 365
           LPSLDVVAVSQ P PE NPDSP
Sbjct: 168 LPSLDVVAVSQAPSPELNPDSP 189


>UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;
           n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 508

 Score = 41.5 bits (93), Expect = 0.011
 Identities = 19/31 (61%), Positives = 20/31 (64%)
 Frame = +2

Query: 119 YLDNCGNSRANTCNQNSDQ*WDECFY*IKTN 211
           YLDNCGNSRANTC +      D C Y  KTN
Sbjct: 468 YLDNCGNSRANTCRRAPTS-GDACIYQTKTN 497


>UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus
           tropicalis|Rep: Novel protein - Xenopus tropicalis
           (Western clawed frog) (Silurana tropicalis)
          Length = 118

 Score = 35.9 bits (79), Expect = 0.53
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +2

Query: 305 MSALSTFDGSFCDYHG 352
           MSALSTFDG+FC YHG
Sbjct: 1   MSALSTFDGTFCAYHG 16


>UniRef50_Q6Z8F1 Cluster: Putative uncharacterized protein
           P0459B01.16; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0459B01.16 - Oryza sativa subsp. japonica (Rice)
          Length = 172

 Score = 35.5 bits (78), Expect = 0.70
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 1   PVVICLSQRLSHACLS 48
           PVVICLSQRLSHAC S
Sbjct: 155 PVVICLSQRLSHACAS 170


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 35.1 bits (77), Expect = 0.92
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = -1

Query: 412 VAVSQXPXPESNPDSPLPVATMVVAETTIES 320
           +A+SQ P PESN +SPLPV  M+     I+S
Sbjct: 372 LAISQAPSPESNSNSPLPVKAMLGQYPNIKS 402


>UniRef50_Q0FI72 Cluster: Putative uncharacterized protein; n=1;
           Roseovarius sp. HTCC2601|Rep: Putative uncharacterized
           protein - Roseovarius sp. HTCC2601
          Length = 507

 Score = 33.1 bits (72), Expect = 3.7
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 111 YSVTWITVVILELIHAIRTLTSDGMSAFIRSKPIDGGPRV 230
           YS T + VV+ EL+    T+ SD  +A I + P+DG  R+
Sbjct: 139 YSATSMAVVLSELVVDDETIPSDNAAAQISAGPVDGETRI 178


>UniRef50_UPI000155C054 Cluster: PREDICTED: similar to KIAA1862
           protein; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           similar to KIAA1862 protein - Ornithorhynchus anatinus
          Length = 836

 Score = 32.7 bits (71), Expect = 4.9
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 349 WLPRVTGNQGSIPXR-XPEKRLPHPRKAASAQITHSRHG 462
           W+PRV G Q  IP R  P  RLP    A S + T    G
Sbjct: 285 WIPRVPGPQSHIPDRPAPAARLPGFSSAGSPRYTRDHRG 323


>UniRef50_Q2Z1Y7 Cluster: Pm27 protein; n=1; Prunus mume|Rep: Pm27
           protein - Prunus mume (Japanese flowering apricot)
          Length = 362

 Score = 32.7 bits (71), Expect = 4.9
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +1

Query: 367 GNQGSIPXRXPEKRLPHPRKAASAQITHSRHGGGSDRKYND 489
           G+ G+   R PE+ L HP   ++  I HS   GGSD    D
Sbjct: 277 GSSGTGRLRQPERALHHPSDGSAVGIRHSSPIGGSDSSDQD 317


>UniRef50_Q9ZVV9 Cluster: Putative uncharacterized protein
           At2g07020; n=1; Arabidopsis thaliana|Rep: Putative
           uncharacterized protein At2g07020 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 620

 Score = 32.3 bits (70), Expect = 6.5
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -3

Query: 260 LSDSSKLTTSDARPSVDWF*SNKSTHPITGQSSD 159
           +SDS     S  RPS+DWF  N+S +  +  SS+
Sbjct: 230 VSDSDLSFVSSDRPSMDWFEDNRSNYATSSSSSE 263


>UniRef50_A4RKZ9 Cluster: Putative uncharacterized protein; n=3;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 775

 Score = 32.3 bits (70), Expect = 6.5
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 172 PVMG*VLLLDQNQSTEGLASEVVNFDESDNFCRSHGQVP 288
           P+M  +L L Q+  T G AS V+ FD   ++CR H  +P
Sbjct: 85  PIMLGMLWLKQHDPTIGFASHVITFD--SDYCRRHCNMP 121


>UniRef50_A2D9Z7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 872

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 430 LPSLDVVAVSQXPXPESNPDSPLPVATMVVAETTIES**GRHLKD 296
           +PSL  V++SQ   P+  P +PLP    +++E   E   G  + D
Sbjct: 67  IPSLPPVSISQTIKPQIIPQNPLPTMNHIISEPLDEPASGEEMAD 111


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,086,080
Number of Sequences: 1657284
Number of extensions: 10019409
Number of successful extensions: 24766
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 24044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24759
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)