Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0353.Seq
         (508 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY171599-1|AAO16519.1|  242|Homo sapiens TAK1-like protein protein.    29   9.3  
AF269163-1|AAF81753.1|  145|Homo sapiens C21orf7 form C protein.       29   9.3  
AF269162-1|AAF81752.1|  138|Homo sapiens c21orf7 form B protein.       29   9.3  
AF269161-1|AAF81751.1|  242|Homo sapiens c21orf7 form A protein.       29   9.3  

>AY171599-1|AAO16519.1|  242|Homo sapiens TAK1-like protein protein.
          Length = 242

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +3

Query: 219 GPRVRSR*F**IG*LLQIAWSSTGDASF-KCLPYQLSMVVSATTM 350
           GP + SR F  +G L  +A SS     F KCL Y +S++ SAT++
Sbjct: 43  GPEMESRYFAQVG-LEHLASSSPPAFGFLKCLDYSISVLCSATSL 86


>AF269163-1|AAF81753.1|  145|Homo sapiens C21orf7 form C protein.
          Length = 145

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +3

Query: 219 GPRVRSR*F**IG*LLQIAWSSTGDASF-KCLPYQLSMVVSATTM 350
           GP + SR F  +G L  +A SS     F KCL Y +S++ SAT++
Sbjct: 43  GPEMESRYFAQVG-LEHLASSSPPAFGFLKCLDYSISVLCSATSL 86


>AF269162-1|AAF81752.1|  138|Homo sapiens c21orf7 form B protein.
          Length = 138

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +3

Query: 219 GPRVRSR*F**IG*LLQIAWSSTGDASF-KCLPYQLSMVVSATTM 350
           GP + SR F  +G L  +A SS     F KCL Y +S++ SAT++
Sbjct: 43  GPEMESRYFAQVG-LEHLASSSPPAFGFLKCLDYSISVLCSATSL 86


>AF269161-1|AAF81751.1|  242|Homo sapiens c21orf7 form A protein.
          Length = 242

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +3

Query: 219 GPRVRSR*F**IG*LLQIAWSSTGDASF-KCLPYQLSMVVSATTM 350
           GP + SR F  +G L  +A SS     F KCL Y +S++ SAT++
Sbjct: 43  GPEMESRYFAQVG-LEHLASSSPPAFGFLKCLDYSISVLCSATSL 86


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,321,970
Number of Sequences: 237096
Number of extensions: 1536014
Number of successful extensions: 4031
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4031
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)