Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0353.Seq
         (508 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-583|AAF47729.2| 1427|Drosophila melanogaster CG14964-PA...    28   8.3  

>AE014296-583|AAF47729.2| 1427|Drosophila melanogaster CG14964-PA
           protein.
          Length = 1427

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +1

Query: 346 PWLPRVTGNQGSIPXRXPE-KRLPHPRKAASAQITHSRHGGGSD 474
           P  P+   + G  P + P  KR P P+   + Q+TH    G SD
Sbjct: 445 PPRPQADASTGMSPKQSPSAKRKPKPQLIDNEQLTHEMSYGTSD 488


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,455,998
Number of Sequences: 53049
Number of extensions: 473197
Number of successful extensions: 1258
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)