Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0352.Seq
(449 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1243 - 25527523-25527960,25527993-25528604 40 7e-04
02_05_0329 - 27986261-27987372,27988632-27988638,27988999-279891... 39 0.002
08_02_1246 - 25559601-25560026,25560031-25560576 37 0.007
08_02_1245 - 25557201-25558199 37 0.009
12_01_0247 - 1836971-1837810 36 0.020
12_01_0244 - 1821413-1822144 35 0.026
11_02_0128 - 8620958-8621248,8622986-8623576 35 0.026
01_03_0018 - 11686420-11687460 35 0.035
12_01_0245 - 1829982-1830995 34 0.061
10_02_0152 - 5902554-5903058,5904171-5904670 33 0.080
07_01_0350 - 2541441-2541645,2541660-2541878,2542573-2542823 33 0.11
11_01_0248 - 1910312-1910730,1910805-1911336 33 0.14
08_01_1053 - 10716970-10717474,10718259-10718323 33 0.14
06_03_0815 - 24905641-24905874,24905974-24906044,24906678-249068... 33 0.14
06_01_1016 + 7944817-7945266,7945461-7945922 32 0.24
11_01_0249 - 1913739-1914755 31 0.32
08_02_0082 + 12059692-12060209,12060484-12060973 31 0.32
11_04_0409 + 17345182-17345669,17346262-17346760 31 0.43
11_04_0176 - 14536305-14537315 31 0.43
08_01_0867 + 8458570-8459168,8460128-8460313,8462684-8463167 31 0.43
07_03_1203 - 24848342-24848885,24849199-24849204,24849648-248499... 31 0.43
11_04_0412 + 17374651-17375196 31 0.57
08_01_0868 - 8466365-8466860,8467124-8467140 30 0.75
11_04_0414 + 17386806-17387936 30 0.99
12_01_0976 - 9821481-9821973,9822417-9822940 29 1.3
09_02_0094 + 4196729-4197571 29 1.7
12_01_0248 - 1841454-1841820,1842223-1842728 28 3.0
07_01_0351 - 2549466-2549978 27 5.3
01_01_0733 - 5715719-5715785,5715908-5715966,5717844-5717884,571... 27 5.3
08_02_1148 - 24693323-24693877,24694092-24694315,24694519-246946... 27 7.0
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 27 7.0
06_01_0461 - 3280874-3281757,3281777-3282343,3282398-3283249,328... 27 9.2
04_03_0563 - 17195605-17196681 27 9.2
>08_02_1243 - 25527523-25527960,25527993-25528604
Length = 349
Score = 40.3 bits (90), Expect = 7e-04
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = -2
Query: 205 FIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGIQF 95
F RKG+VG W++Y EEM K+ + + +K++ +G+ F
Sbjct: 313 FFRKGEVGDWKNYLTEEMAKKLDAVIEEKLKGSGLTF 349
Score = 33.9 bits (74), Expect = 0.061
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = -3
Query: 414 PNM-LFLXYEEXKQDLXGTIKRIANFFNKTYTDEQI-SGLCKHV 289
P+M LFL Y++ D G +K++A F +TDE++ +G+ + V
Sbjct: 237 PDMVLFLKYDDMMADPAGHVKKLAEFLRAPFTDEEVGAGVVEEV 280
>02_05_0329 -
27986261-27987372,27988632-27988638,27988999-27989128,
27989157-27989216,27989318-27989970,27990056-27990526
Length = 810
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -3
Query: 447 HVKEAW--DLXNHPNMLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQISG 304
H E W L ++FL YE K+D G+++R+A F +T E+++G
Sbjct: 681 HAAEYWKESLARPEEVVFLRYESLKEDGVGSVRRLAGFLGCPFTGEELAG 730
Score = 29.5 bits (63), Expect = 1.3
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -2
Query: 205 FIRKGKVGGWRDYFDEEMTKECERWMAKKV 116
F RKG+VG W+++ EM + + + +K+
Sbjct: 768 FFRKGEVGDWKEHMSPEMARRLDDVVEEKL 797
>08_02_1246 - 25559601-25560026,25560031-25560576
Length = 323
Score = 37.1 bits (82), Expect = 0.007
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = -2
Query: 253 VNFLSKVD--GLIPGEEP-FIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGIQF 95
VNF VD G P E F RK KVG W++ +EM ++ + +A+K++ +G+ F
Sbjct: 268 VNFSGVVDRIGGRPMENSSFFRKAKVGDWKNNLTQEMAQKLDAVIAEKLKGSGLTF 323
Score = 32.7 bits (71), Expect = 0.14
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3
Query: 408 MLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQI 310
+LFL Y++ D G +K++A F +TDE++
Sbjct: 214 VLFLKYDDMMADPAGHVKKLAEFLRVPFTDEEV 246
>08_02_1245 - 25557201-25558199
Length = 332
Score = 36.7 bits (81), Expect = 0.009
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = -2
Query: 205 FIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGI 101
F RKGKV W++Y EEM K+ + + +K++ +G+
Sbjct: 296 FFRKGKVRDWKNYLTEEMAKKLDAAIEEKLKGSGL 330
Score = 31.9 bits (69), Expect = 0.24
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -3
Query: 408 MLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQI-SGLCKHV 289
+LFL Y++ D G +K++A F +TD+++ +G+ + V
Sbjct: 221 VLFLKYDDMMADPAGHVKKLAEFLRVPFTDDEVDAGVVEEV 261
>12_01_0247 - 1836971-1837810
Length = 279
Score = 35.5 bits (78), Expect = 0.020
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 432 WDLXNHPNMLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQ 313
W + +LFL YEE D G ++R+A F + +T E+
Sbjct: 149 WHVERPSEVLFLTYEELAADTLGHLRRLAEFVGRPFTTEE 188
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 259 GHVNFLSKVDGLIPGEEPFIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGI 101
G NF K +P F R+G VG WR++ EM + + K + +G+
Sbjct: 215 GMTNFTKKD---VPNNISF-RRGVVGDWRNHLTPEMARRIDEITEVKFKGSGL 263
>12_01_0244 - 1821413-1822144
Length = 243
Score = 35.1 bits (77), Expect = 0.026
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 205 FIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGIQF 95
F R+G VG WR+Y EM + + + K E TG+ F
Sbjct: 197 FFRRGVVGDWRNYLTPEMAMKIDEIIEIKFEGTGLLF 233
>11_02_0128 - 8620958-8621248,8622986-8623576
Length = 293
Score = 35.1 bits (77), Expect = 0.026
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -2
Query: 256 HVNFLSKVDGLIPGEEPFIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGIQF 95
+ F V+ +P E F RKG VG W +Y EM + ++++ +K +G F
Sbjct: 239 NAGFRRVVNVEVPNESYF-RKGAVGDWVNYVTPEMAESLDKFLTEKFRGSGFTF 291
>01_03_0018 - 11686420-11687460
Length = 346
Score = 34.7 bits (76), Expect = 0.035
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 432 WDLXNHPNMLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQ 313
W + +LF+ YEE D G ++R+A F + +T E+
Sbjct: 224 WHVERPGQVLFMTYEELSGDTLGQLRRLAEFVGRPFTGEE 263
Score = 34.3 bits (75), Expect = 0.046
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 205 FIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGIQFPT 89
F R+G VGGW +Y EM + K +G+ PT
Sbjct: 304 FFRRGVVGGWPNYLSPEMATRIDEITESKFRGSGLVLPT 342
>12_01_0245 - 1829982-1830995
Length = 337
Score = 33.9 bits (74), Expect = 0.061
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 432 WDLXNHPNMLFLXYEEXKQDLXGTIKRIANFFNKTY-TDEQISGLCKHV 289
W + +LFL YEE D G ++R+A F + T+EQ G+ +++
Sbjct: 211 WHVEKPNQVLFLTYEELAADTLGQLRRLAEFVGCPFTTEEQKHGVDRNI 259
Score = 32.3 bits (70), Expect = 0.19
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 235 VDGLIPGEEPFIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGI 101
VD +P F R+G VG WR++ EM + + K + +G+
Sbjct: 282 VDSTVPNNT-FFRRGVVGDWRNHLTPEMARRIDEITKSKFKGSGL 325
>10_02_0152 - 5902554-5903058,5904171-5904670
Length = 334
Score = 33.5 bits (73), Expect = 0.080
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = -2
Query: 211 EPFIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGIQF 95
+ F RKG +G W ++ EM + ++++++K + +G F
Sbjct: 295 DSFFRKGAIGDWVNHVTPEMAESLDKFLSEKFDGSGFTF 333
>07_01_0350 - 2541441-2541645,2541660-2541878,2542573-2542823
Length = 224
Score = 33.1 bits (72), Expect = 0.11
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 211 EPFIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGIQF 95
+ F R+G G W ++ EM + + M +K+ TGI F
Sbjct: 185 DSFFRRGGAGDWTNHMTPEMARRLDAIMNEKLHGTGISF 223
>11_01_0248 - 1910312-1910730,1910805-1911336
Length = 316
Score = 32.7 bits (71), Expect = 0.14
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 432 WDLXNHPNMLFLXYEEXKQDLXGTIKRIANFFNKTYT-DEQISGLCKHV 289
W + +LFL YEE D G ++ +A F + +T +EQ +G+ + +
Sbjct: 186 WHVERPSEVLFLTYEELAADTLGHLRCLAEFVGRPFTMEEQDAGVDRKI 234
Score = 27.9 bits (59), Expect = 4.0
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -2
Query: 259 GHVNFLSKVDGLIPGEEPFIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGIQ 98
G NF K +P F R+G VG WR++ EM + + K + +G++
Sbjct: 252 GMTNFTEKD---VPNNTVF-RRGVVGDWRNHLTPEMARRIDEITEIKFKGSGLR 301
>08_01_1053 - 10716970-10717474,10718259-10718323
Length = 189
Score = 32.7 bits (71), Expect = 0.14
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -3
Query: 447 HVKEAWDLXN-HPN-MLFLXYEEXKQDLXGTIKRIANFFNKTYTD-EQISGLCKHV 289
H+ W+ P+ +LFL YE+ QD GTI+++A F + +D E+ +G+ +
Sbjct: 67 HILGYWNASKKEPSRVLFLTYEQMLQDPMGTIRQLAEFLGQPISDAEEETGVVAEI 122
>06_03_0815 -
24905641-24905874,24905974-24906044,24906678-24906847,
24906862-24906955,24907904-24907948,24908599-24909631
Length = 548
Score = 32.7 bits (71), Expect = 0.14
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 408 MLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQISG 304
+LFL YEE K+D G ++R+A F +T + G
Sbjct: 242 VLFLRYEEMKRDPAGHVRRLAEFAGVPFTSPEEDG 276
>06_01_1016 + 7944817-7945266,7945461-7945922
Length = 303
Score = 31.9 bits (69), Expect = 0.24
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -2
Query: 223 IPGEEPFIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGIQF 95
IP E F RKG VG W ++ EM + + +A K TG+ F
Sbjct: 261 IPRETLF-RKGVVGDWVNHMTPEMARRVDDIVADKFSGTGLTF 302
Score = 29.9 bits (64), Expect = 0.99
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -3
Query: 411 NMLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQ 313
N+LFL YEE +D G ++++A F +++ +
Sbjct: 194 NVLFLRYEELLRDPAGNVRKMARFVGLPFSEAE 226
>11_01_0249 - 1913739-1914755
Length = 338
Score = 31.5 bits (68), Expect = 0.32
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 432 WDLXNHPNMLFLXYEEXKQDLXGTIKRIANFFNKTY 325
W + +LFL YEE D G ++R+A F + +
Sbjct: 212 WHVKRPSQVLFLTYEELTTDTLGQLRRLAEFVGRPF 247
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 205 FIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGI 101
F R+G VG WR++ EM + + K + +G+
Sbjct: 292 FFRRGVVGDWRNHLTPEMARRIDEITEIKFKGSGL 326
>08_02_0082 + 12059692-12060209,12060484-12060973
Length = 335
Score = 31.5 bits (68), Expect = 0.32
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Frame = -3
Query: 447 HVKEAWDLXN-HPN-MLFLXYEEXKQDLXGTIKRIANFFNKTYTD-EQISGLCKHV---- 289
++ E W N P +LFL YE+ QD +K++A F + ++ E+ +G+ +
Sbjct: 215 NILEFWYASNAEPTRVLFLTYEKVLQDPCDAVKKLAQFLGQPFSGAEEEAGVVTEIADLC 274
Query: 288 HIDNFRN 268
IDN RN
Sbjct: 275 SIDNLRN 281
Score = 30.3 bits (65), Expect = 0.75
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -2
Query: 250 NFLSKVDGLIPGEEPFIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGI 101
N + G I E F RKG G W ++ EM + + + +K++ +G+
Sbjct: 285 NKYGSIGGKI-SHESFFRKGMAGDWTNHMTLEMAERLDSILREKLDGSGL 333
>11_04_0409 + 17345182-17345669,17346262-17346760
Length = 328
Score = 31.1 bits (67), Expect = 0.43
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Frame = -3
Query: 447 HVKEAW-DLXNHPN-MLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQ--------ISGLC 298
HV E W + P +LFL YEE ++ ++++A F ++ E+ I GLC
Sbjct: 203 HVLEYWAESKRRPQKVLFLRYEEMTRETTSNVRKLAEFMGCPFSGEEEADGVPDAIVGLC 262
Query: 297 KHVHIDNFRNN 265
H+ + N
Sbjct: 263 SFDHLRSLEVN 273
Score = 30.7 bits (66), Expect = 0.57
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 211 EPFIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGIQFPT 89
+ F RKG G W +Y EM + + + ++ +G F T
Sbjct: 285 DSFYRKGVAGDWANYLSPEMAAQLDLVIDDELRSSGFSFAT 325
>11_04_0176 - 14536305-14537315
Length = 336
Score = 31.1 bits (67), Expect = 0.43
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Frame = -3
Query: 447 HVKEAWDLXN-HPN-MLFLXYEEXKQDLXGTIKRIANF----FNKTYTD----EQISGLC 298
H E WD P +LFL YE+ QD G ++ +A F F++ D +QI LC
Sbjct: 189 HAGEYWDESQARPEKVLFLMYEDLLQDTVGNLRTLAEFMGCGFSRQEEDDGIVQQIVELC 248
Query: 297 KHVHIDNFRNNDS 259
++ N N S
Sbjct: 249 SLNNLKNLNVNKS 261
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -2
Query: 214 EEPFIRKGKVGGWRDYFDEEMTKECERWMAKKVEETG 104
++ F RKG G W ++ EM ++ + +++E +G
Sbjct: 270 KDGFFRKGGTGDWSNHMSPEMAARLDKIVKERLEGSG 306
>08_01_0867 + 8458570-8459168,8460128-8460313,8462684-8463167
Length = 422
Score = 31.1 bits (67), Expect = 0.43
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -3
Query: 447 HVKEAW--DLXNHPNMLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQ 313
H+ E W N +LFL YE QD +I+ +A F + +T +
Sbjct: 300 HILEYWRASKANPSRVLFLRYERLLQDPTDSIRELAEFVGQPFTSSE 346
Score = 28.3 bits (60), Expect = 3.0
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = -2
Query: 211 EPFIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGI 101
+ + RKG GGW + EM + + + K + +G+
Sbjct: 384 DSYFRKGVAGGWTSHMTPEMGRRLDAILRDKFDGSGL 420
>07_03_1203 -
24848342-24848885,24849199-24849204,24849648-24849947,
24852725-24853047,24853076-24853255
Length = 450
Score = 31.1 bits (67), Expect = 0.43
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 211 EPFIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGIQF 95
E F RKG +G W ++ EM +++++ K +G F
Sbjct: 410 ESFFRKGVIGDWVNHVTPEMADSLDKFLSAKFYGSGFTF 448
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 408 MLFLXYEEXKQDLXGTIKRIANFFNKTYTD-EQISGLCKHV 289
+LFL YEE +D I++I F + ++D E+ +G+ + +
Sbjct: 340 VLFLKYEEVLRDPTKNIEKITEFIGQPFSDAEKEAGIVESI 380
>11_04_0412 + 17374651-17375196
Length = 181
Score = 30.7 bits (66), Expect = 0.57
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -3
Query: 447 HVKEAWD-LXNHPN--MLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQ 313
HV E W+ PN +LFL YEE ++ ++++A F + ++ E+
Sbjct: 41 HVVEYWEESERRPNNKVLFLRYEEMIREPARNVRKLAEFVGRPFSSEE 88
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 217 GEEPFIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGIQF 95
G + F RKG G WR++ EM + + ++ +G F
Sbjct: 124 GNDFFFRKGVAGDWRNHMSTEMAAMLDGVVEDELRGSGFTF 164
>08_01_0868 - 8466365-8466860,8467124-8467140
Length = 170
Score = 30.3 bits (65), Expect = 0.75
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 408 MLFLXYEEXKQDLXGTIKRIANFFNKTYTD-EQISGLCKHV 289
+LFL YEE +D T++ +A F + ++D E+ +G+ +
Sbjct: 63 VLFLKYEEVLRDPVNTVRELAQFVGQPFSDTEEEAGIVAEI 103
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -2
Query: 211 EPFIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGI 101
+ + RKG G WR++ +M + + M +K + +G+
Sbjct: 132 DSYFRKGVEGDWRNHMTPKMGEHLDSIMREKFDGSGL 168
>11_04_0414 + 17386806-17387936
Length = 376
Score = 29.9 bits (64), Expect = 0.99
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 447 HVKEAWDLXNH--PNMLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQIS 307
HV+E W+ +LFL YEE ++ ++R+A F +T +++
Sbjct: 248 HVREYWEESRRRPEKVLFLRYEEMLREPARNVERLAEFLRCPFTAGEVA 296
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -2
Query: 235 VDGLIPGEEPFIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGIQF 95
V L +E F R+G G W ++ EM +R + + +G F
Sbjct: 322 VTDLAVKKESFFRRGVAGDWSNHMSPEMASRLDRVVEDALRGSGFTF 368
>12_01_0976 - 9821481-9821973,9822417-9822940
Length = 338
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = -3
Query: 447 HVKEAWDLX--NHPNMLFLXYEEXKQDLXGTIKRIANFFNKTY--TDEQISGLCKHVHID 280
H+ W+ N +LFL YE+ +D ++++A+F + + T+E+ + V +
Sbjct: 217 HIIGYWNACKANPEKVLFLVYEDLLRDPANIVRKLADFLGQPFSSTEEEAGLVTDIVRLC 276
Query: 279 NFRNNDSV 256
+F N S+
Sbjct: 277 SFENLKSL 284
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -2
Query: 253 VNFLSKVDGLIPGEEPFIRKGKVGGWRDYFDEEMTKECERWMAKKVEETGIQF 95
VN + + P F RKGK G W+ + EM + + + +K+ +G+ F
Sbjct: 286 VNKMGEASFAFPNASYF-RKGKAGDWKIHMTPEMVECFDTIVKEKMHGSGLVF 337
>09_02_0094 + 4196729-4197571
Length = 280
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -3
Query: 447 HVKEAW--DLXNHPNMLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQI-SGLCKHV 289
H + W L ++LFL YEE D ++ +A F +T+E++ SG+ + V
Sbjct: 155 HYLQYWKESLKRPRDVLFLRYEEIVFDPLKVVRDLAGFIGVPFTEEEVKSGVDQEV 210
Score = 27.9 bits (59), Expect = 4.0
Identities = 9/35 (25%), Positives = 23/35 (65%)
Frame = -2
Query: 199 RKGKVGGWRDYFDEEMTKECERWMAKKVEETGIQF 95
R+GK G W ++ ++M ++ ++ + K + +G++F
Sbjct: 246 RQGKTGDWVNHMSKDMGEKLDQLVEDKFKGSGLKF 280
>12_01_0248 - 1841454-1841820,1842223-1842728
Length = 290
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 432 WDLXNHPNMLFLXYEEXKQDLXGTIKRIANFFNKTY-TDEQISGLCKHV 289
W +LFL YEE D G ++ +A F + +EQ G+ + +
Sbjct: 202 WHTKRPSQVLFLTYEELTTDTLGQLRHLAEFVGCPFMVEEQELGVDRKI 250
>07_01_0351 - 2549466-2549978
Length = 170
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -3
Query: 408 MLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQ 313
+LFL YEE D +++++A F + ++ E+
Sbjct: 53 VLFLRYEELLHDPADSVRKLARFVGQPFSPEE 84
>01_01_0733 -
5715719-5715785,5715908-5715966,5717844-5717884,
5718086-5718134,5718427-5718559,5719303-5719384,
5719990-5720472,5720612-5721024,5721260-5721419,
5721541-5721665,5721756-5721811,5721831-5721889,
5722069-5722180,5722952-5723032
Length = 639
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 17 YSEEIIERKNKFCGLIRSISRLRISWKLNTSF 112
+ EE R N+FCG++ S + + KL +SF
Sbjct: 188 FDEENCLRDNRFCGVLNSFVKRTANGKLVSSF 219
>08_02_1148 -
24693323-24693877,24694092-24694315,24694519-24694636,
24694761-24695132,24696998-24697324
Length = 531
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -2
Query: 262 LGHVNFLSKVDGLIPGEEPFIRK--GKVGGWRDYFDEEMTKECERWMA 125
L H L VD ++P EEP + K + G R D T E E W A
Sbjct: 454 LQHSYTLRDVDEIVPVEEPPVSKEPERCGSARSLADCISTNEEEEWSA 501
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 196 KGKVGGWRDYFDEEMTKECERWMAKKVEETG 104
KG+V WRDY + + ER+ K +++ G
Sbjct: 14 KGRVLVWRDYRGDVSALQAERFFTKLLDKEG 44
>06_01_0461 -
3280874-3281757,3281777-3282343,3282398-3283249,
3284503-3284644
Length = 814
Score = 26.6 bits (56), Expect = 9.2
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +2
Query: 17 YSEEIIERKNKFCGLIRSISRLRISWKLNTSFFHFFGHPSFALLSHLLIEVIAPATDFSF 196
+++E R CG+ ++ + FG+ +LL+ LLIEV+ FS
Sbjct: 448 FTKESDSRLTHSCGVTEKLAYPSSQMLEDVPSKFMFGYFLSSLLTVLLIEVVLIVAGFSV 507
Query: 197 PYKW 208
KW
Sbjct: 508 VKKW 511
>04_03_0563 - 17195605-17196681
Length = 358
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -3
Query: 408 MLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQ-----ISGLCKHVHIDNFRNNDSVM 253
+LFL YE+ +D + IANF ++ E+ + + K + +N D+ M
Sbjct: 246 VLFLRYEDMLEDTASAVVAIANFVGCPFSAEEERAGVVDAIVKLCSFEELKNLDTNM 302
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,722,252
Number of Sequences: 37544
Number of extensions: 193126
Number of successful extensions: 499
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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